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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:1104683..1107169- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11791.1.p1 ID=MSTRG.11791.1.p1|Name=MSTRG.11791.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2487bp|location=Sequence derived from alignment at sc0000086_pilon:1104683..1107169- (Clytia hemisphaerica_ch_hm2_pilon)
TGAGATTGTCAAGCTGATAAAACATAAAAAAAAAATCAAAAAAGTAGCGA
AGAGAGCGTATAAAACTCAAAGACGAAGACATATTATTGTGATATTATTC
TCTTCTAAACTTCTATTCTTAAAGGATAAGTATTGTCAATAAAATGGCAG
TTCTCGGAGACGGGAGTTTCTAAACATCGACTAGAAATGGCGACCACGAC
CAGCGACCACGACCGCCGACCAGATAAATTTGGATTATCAAGTTTATCTG
CTCTCTCCACCGTAGAGAATGATTAAATCGAGTCCTCAGAATACTAAAAA
GTGGCCTTTGAAGTAACCAGTCATTTTCTTGACAAAGTGACACTATTTGA
CAAAAATATTGACAGGGTCATTAAAAGTATGATGTTTAAGTAAGCTTTGT
TAAACTAAATATTTTAATTATGCTGAATAAGATGCCTTTAGTATGAATAG
ATAGAACTTGTCAGTAGGAAAAAATTGGGAAGGCCAGTTTTAGAGATATG
GATCTAATCAATTATTCTATTGTCTTTATGCTGACAAAATGACTAATTTC
GACAGAAATTCTCAAACCATTTTCAAAAAATTTTGTGCCACTAATTATTG
TGATGCTGATAATACAAAAGGATAGAAATTGACACCATAATCAAGCTCCA
AGAGCGTCGAAATGGTTGTTTTACGTATTTGGCACGTAGCTTTAATTAGA
TGAGACAGGGGTGAGCTTACTCTTCAATATTAAATATATTCAAATGATTA
GGAGAGACACTCTACGTTGGAGAAAGAGAAAAAACTCGATAACCCAAATT
TATCTGGTCGCTGGTCGTGGTCGCCGGTCGTGGTCGTCATTTCTGGTCGA
CGTTTAGAAACTCCCCTCGGAGACTGTTTCAACAAAATAAACATCTCAAA
TACAAATCGAATGGACACATTACAGTACTGCAGATGTTGTAGAATTTTCG
TATCATTGGACCGGTACCTCATCCGCGGTGGGATCTGCGATCGCTGCTCT
CTGCGATATACAAGTATTTACTATAATAACGCATACAGTTCTCGGTTCAG
TATGAATGATGTAATATATATCAAAATCTGGTCTTTGAACACAGAAAGGC
TAACTATGATTTGGGATTTTGCTATTCATCAGTCCAGTTACATCAAAGAT
GTAAAACAATTGGTGTCCAAAATAACCGGAATCTCTTTTGAAAATAATAG
ATTGTATCATTTACGTGAAAATCCTCATATTGGGCAAGAAATTCGACCAT
CCAAACATTGCCATTCCATATGGCACCCTTTGAATGATTTTGAGACAATA
GAGTACCATTACAGCATCACTAAAGGACCTAAAGAATTGAATTATTACCG
TCGCACTAATTATGATGATATAAAAGTAGACAAAGTAGACAAGTATATGG
TTGTTGAAAATAAAACCAAAATTTCAATCATGTGTAATAAAAACTTTGAA
GAACCGAAGGAAATTTGCTCGTTCGAAATCGATAGATCCAGCAGTATTAA
AGATATTAAAGAAATGGTTGCTAAGATTATCGACATAAACTGTATATCAA
CATTTCGATTAAATTTCTTGACAAAAACAGTGGAGTTGAAGTTCCAAAAC
TTTCGGTTAATAAGAGATGTGAAAATTCATATTCAAAAAGAATTTAACAT
CAGAGTTGGTGACCAAGTTCTGATTTATAAAGGTAAAAAATTGATGGAGA
ATCAAAGAACTAGAGATGTGTTTCTTGAAAATCAAATGAATTCATTAAGA
GACGTATCTATTAGCTTGGTGATTGAAAAAAAGCCATTCATGCTCAGAAT
AGAACCTCAAATACGATCTATGTCATGGTTTAGCATATCTATCAATGATT
CTGACAACATTGAAGAGGTGAAGCAGCAAATACAAGCAAAAACAGATATT
CCTATCCAAAACATACATCTCATTGACCAAAAAACGCAAGACATTTTGTG
TGATACAAAAAAAGTCGAAGATTATAAGTTTCTGGATTATTCAAATATAA
CTTTGCAACGAAAACTAGTCATTAGACTTCACTTTGCAAAAGATAATCGA
ATCGAGGAGAGATTTGAAATTTTACCAGGGTATGAAGAAAGAACCGTCTT
AGACCTCTTGGAAGAAATCCGCGAATCTTTCTTACCGAAGGAAATGAATG
TTGAGGAAATTAGAGATCGTATTGGCACTACAAAAGACACCCTGATTACA
AATATCTATGAAATAGATTTTAGAATCAAGAAAACTAAAAAATGCTCAAT
AATGTAGCTCAAAATGTATATAATATCTGATCAATGTTATTTTTTTGTAA
GAGTAACGGAACTCTAGTTAAACTAGTCATAGCTTTCACTAAATGCCCAC
GCAGAAGATCATGTCATGCACTTAAAGCTTTTAATGCTTTAAAGATTAAA
GTAGTAAAAATAATCAGGAATAATTGATTGATTTAATTATTGAATGATTG
ATTAATTAATTGATTGAGGCATATACTTGAAAAAAAC Coding sequence (CDS) from alignment at sc0000086_pilon:1104683..1107169- >MSTRG.11791.1.p1 ID=MSTRG.11791.1.p1|Name=MSTRG.11791.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1347bp|location=Sequence derived from alignment at sc0000086_pilon:1104683..1107169- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACACATTACAGTACTGCAGATGTTGTAGAATTTTCGTATCATTGGA
CCGGTACCTCATCCGCGGTGGGATCTGCGATCGCTGCTCTCTGCGATATA
CAAGTATTTACTATAATAACGCATACAGTTCTCGGTTCAGTATGAATGAT
GTAATATATATCAAAATCTGGTCTTTGAACACAGAAAGGCTAACTATGAT
TTGGGATTTTGCTATTCATCAGTCCAGTTACATCAAAGATGTAAAACAAT
TGGTGTCCAAAATAACCGGAATCTCTTTTGAAAATAATAGATTGTATCAT
TTACGTGAAAATCCTCATATTGGGCAAGAAATTCGACCATCCAAACATTG
CCATTCCATATGGCACCCTTTGAATGATTTTGAGACAATAGAGTACCATT
ACAGCATCACTAAAGGACCTAAAGAATTGAATTATTACCGTCGCACTAAT
TATGATGATATAAAAGTAGACAAAGTAGACAAGTATATGGTTGTTGAAAA
TAAAACCAAAATTTCAATCATGTGTAATAAAAACTTTGAAGAACCGAAGG
AAATTTGCTCGTTCGAAATCGATAGATCCAGCAGTATTAAAGATATTAAA
GAAATGGTTGCTAAGATTATCGACATAAACTGTATATCAACATTTCGATT
AAATTTCTTGACAAAAACAGTGGAGTTGAAGTTCCAAAACTTTCGGTTAA
TAAGAGATGTGAAAATTCATATTCAAAAAGAATTTAACATCAGAGTTGGT
GACCAAGTTCTGATTTATAAAGGTAAAAAATTGATGGAGAATCAAAGAAC
TAGAGATGTGTTTCTTGAAAATCAAATGAATTCATTAAGAGACGTATCTA
TTAGCTTGGTGATTGAAAAAAAGCCATTCATGCTCAGAATAGAACCTCAA
ATACGATCTATGTCATGGTTTAGCATATCTATCAATGATTCTGACAACAT
TGAAGAGGTGAAGCAGCAAATACAAGCAAAAACAGATATTCCTATCCAAA
ACATACATCTCATTGACCAAAAAACGCAAGACATTTTGTGTGATACAAAA
AAAGTCGAAGATTATAAGTTTCTGGATTATTCAAATATAACTTTGCAACG
AAAACTAGTCATTAGACTTCACTTTGCAAAAGATAATCGAATCGAGGAGA
GATTTGAAATTTTACCAGGGTATGAAGAAAGAACCGTCTTAGACCTCTTG
GAAGAAATCCGCGAATCTTTCTTACCGAAGGAAATGAATGTTGAGGAAAT
TAGAGATCGTATTGGCACTACAAAAGACACCCTGATTACAAATATCTATG
AAATAGATTTTAGAATCAAGAAAACTAAAAAATGCTCAATAATGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:1104683..1107169 - |
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