MSTRG.11769.1.p1 (mRNA) -

Overview
NameMSTRG.11769.1.p1
Unique NameMSTRG.11769.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000086_pilon:789637..791238+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11769.1.p1 ID=MSTRG.11769.1.p1|Name=MSTRG.11769.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1602bp|location=Sequence derived from alignment at sc0000086_pilon:789637..791238+ (Clytia hemisphaerica_ch_hm2_pilon)
AATCTACTGACAACATAAACATGATGCAAAGATGTTGCTTTGACAACTCG
TTAGCAAATATTTAAATATCGTTTTTCTGTTTGAAAAATGGTAATATATA
AAGGTATTCGAATTCAAAATGTTGTCTAAGGCTTGATGAAATGCTTAAGC
ACTTTGTTTTGGTCGGAATATCAAGATATTGGTAATAGGCTTTGAAAGAG
AAAGTAAAAAGAATTCTTTGTTTGACGTTGTTCATAAACCATTTTATGGT
TCCTAGTTGAAGCAAAAAATGCTAGTAACGACACTACAGTAACATCGTTT
TGTTCAAgtcttaataatttttttttatttctagtgAAAACAACAAATCC
AAATTTTAGATATCGAAATTACAGATATCAAAATGAAGACAATATCAATC
TCTTTATTGGTGATCTTTGCATCTTTGGCAATCTCATATTCAATGAACCA
ACAAGATGCTGGCAAGATTAACAAGTCGTGGACGAAATTGCTTGATCTtc
aaaagaagattgaaaatgatGTCAAGCGATTCGAAAATGAGAGGTCACCT
CCAGCAGGTGCAATGAATTTAAATCCTAAAATCCAAAAGCTTGAAGACAT
AATTGCTTACTTTCAAACGCAGGCTAGTGATTCAACCTTTCAAAGTCATG
TTCACAAAATCGAGTTTAAACCAAAGGATGATAAGAAAATTACACCGGAG
AAATTCAAACGTGATATGATCAAAAGGTTGAAGAAAAGTAATTGTGACGA
CCCTAAAAAGAAGAACTTCGTTCATATAGAACGTACCGAACAAGTCTATT
ACCATTTCCATGATGTTATCCTGTGTAGACGGAAATCTGatggcaaattt
ttgatgaaacaGTGTGATAATGCTGATGATTGCTGGGATTCACATCCAAA
AGAATTGGAGATCGTTTTCAAACCTGGATATCAAGGCACAAAAACATATA
ATTGACTCTAAATCATGACCTTATGGTTAATGGATTTTAGATGGGAGATC
TATGGCTGGTATTAATTAAGATAGATAGAAGTAGAATTGGCAAGGCAAGG
TCATATATCTTCTTCCAGGGCAAAATTTGCTTGATAATGAACTTTATGGA
TTGTAAAATATAGTCTAGTCTGAGATCTGGTAATGACTCAAGCGCCTGGC
ATTAATAGAATCAAAATGACTTGAGCAAATCAAAATACTGTGAATATGAA
AAATGATGTAAAATATTGTCGTCGTATGTAAATAGTAAATTGTAATGTag
gtttgagatattttcaGACTAACTAGCTAAATGTACCaatatttgacttt
tttctaaggatcaagaaaattttattcaaaattcaatatttcaattttcc
cGTCTTCAGTGAATTGTCAAAGTATTTtgctaacctgataacagatggtt
ataattttttttcgcacGTAGTGAACCCCTGACGGCgtttgaaaattaac
catcttAGAGAAAAGGTACAATACCGGcaataatatttgagaaaaaggaa
attcccacgaaattttTATAGCCACAAtcaatttggaagcgctcttactt
aggttggaagggtggagttttaactctgagttttaacatgagactaaAGA
CT

Coding sequence (CDS) from alignment at sc0000086_pilon:789637..791238+

>MSTRG.11769.1.p1 ID=MSTRG.11769.1.p1|Name=MSTRG.11769.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=573bp|location=Sequence derived from alignment at sc0000086_pilon:789637..791238+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACAATATCAATCTCTTTATTGGTGATCTTTGCATCTTTGGCAAT
CTCATATTCAATGAACCAACAAGATGCTGGCAAGATTAACAAGTCGTGGA
CGAAATTGCTTGATCTtcaaaagaagattgaaaatgatGTCAAGCGATTC
GAAAATGAGAGGTCACCTCCAGCAGGTGCAATGAATTTAAATCCTAAAAT
CCAAAAGCTTGAAGACATAATTGCTTACTTTCAAACGCAGGCTAGTGATT
CAACCTTTCAAAGTCATGTTCACAAAATCGAGTTTAAACCAAAGGATGAT
AAGAAAATTACACCGGAGAAATTCAAACGTGATATGATCAAAAGGTTGAA
GAAAAGTAATTGTGACGACCCTAAAAAGAAGAACTTCGTTCATATAGAAC
GTACCGAACAAGTCTATTACCATTTCCATGATGTTATCCTGTGTAGACGG
AAATCTGatggcaaatttttgatgaaacaGTGTGATAATGCTGATGATTG
CTGGGATTCACATCCAAAAGAATTGGAGATCGTTTTCAAACCTGGATATC
AAGGCACAAAAACATATAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11769MSTRG.11769Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11769.1.p1.exon1MSTRG.11769.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11769.1.p1MSTRG.11769.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086_pilongenomesc0000086_pilon:789637..791238 +