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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:631744..635795+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11756.1.p1 ID=MSTRG.11756.1.p1|Name=MSTRG.11756.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4052bp|location=Sequence derived from alignment at sc0000086_pilon:631744..635795+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTGCTTTTCATGATAGACCTTTCCTTGTTCATCTAATTTGAAACAGT
GCACAAATCAATTTAGTGAATGgatataccgtaagttggtctaataacTA
ATATCGACCGACACATCCCTCCTCTAACTTgtcggggtgagcatttgcat
ggggtattcgtcacccagtgtaaatgagataggacatctcaggctaaaag
cgtgaaaatgaagaaaactgggaactttattttttcgttaaaagtttctt
caatcttcgaagacaaaattgacccatgaaaaaaaaaatagacctttttt
taaagaggcagccatgttgaataattatgtactccagcataaaaacaatg
atacagccatgCATAATTATTGTATCATGCATATTTTAAAAATTATAcat
ggctgtatcattgtttttatgctggagtacataattattcaacatggctg
cctctttaaaaaaaggtctattcatctatgcagttcttcaaaatgaagca
aaatatttcaaacccggttcaattgcgtggggtattcagcactattacat
cacttttgttttcgaccccttgcaTTTCACATTTTGCCACCAAtcacaag
tgaaaaataccccgttcatttgccaggatgtggtGCCTGACTGTAATATG
AAAGCttaaacagtttcaacctttctataaatttcagctgataaaaaggg
tgtcggaattagagaaGAGGGGTGTCAGTGGGTGTTGGACATTAGGAAAA
ATATGCCTctgttgatattttgaaaagaaaactttcaggATCTGAAAAAA
TCTCTGATCAAAGTGTTTCTAGTGGAAAATACTAGGGGAAAGTTTATGGT
GTACCGTCAAAAGTGCTAtaaacttgggactatctgaaaaaacatgaaac
agcaattcggccaccatttcaccaaacctccaaagtcatttgatttgagt
taatgaaaagcgtattaaaaaatacgcAATTTCTCTTTCGTACTGAGTAC
TAGGCTTTTAAAAAGGGCACATTATcggtgaaagttatcgtgacatgtta
tgacagaaagtatgattgataaacttggtggagttatcaaaacaaattag
ttgtcaaagagatttgaCAGTAATTGAAAATACAGGTCAGATAACattcc
catgtttcgaccaatcttcccaagttagagcagttgacggtagtggTGAC
CCCCGTATACAGCTCGCACAACAAAACAGCTACATAAacagtctaagctt
aaactcctatatcaggattagaaactaggctagtcttacctcttttatcc
tTCCCTTAACAACAATACAataatgctgacaagttgacacaacacattga
caagtaatccctgagagaagcttatattgaaatctgcaacaaaaacgaaa
gtggtctcttctactgattgcttcccggcGCTCCTTCGCagttgtttatc
aaatttccaccaatgaggttgccacatttcaaacggcccttctttttggc
actcGTGGCCGTAAAATCTCAActttcatatatttgtttcaatctgtgat
cctaaggcttaggttGTTTCTCATATAGGAGTTTTGGTCTATACTGATAA
ACTTTCACTGTAAACTTCCCATGcaggttttttgcaaaaaacttttgatt
tcttcagTGATGTGGAGATATTATACAAGATGGCAGGAGGTTTTTGtaca
gaaatcttcaaaaaattggcttttcATTGAACTAAGTTTGACATGACAGT
CAGGAGTAACTGCCTAGAtagaaacaaatttttgaatttcacaaaTACTC
CTATCTAAGATAAGATATAAGTACTTATCTAGgcataaaatttgttctta
ggttagAACAAATAAAGTTATCACGATCAGGTCTGCACATTGATCACGAG
AAAGCTAAACACTCGGTAATTTTCAGGAACTTGTGATTTTGACTTGAAGT
AAGcaaaattattacttttattGGGTGAAACATTGATCTTCCCTGTTatt
ttttacaacaaaaaaatttggtaaattactttctttttcaatattgtgaa
atcaagtgcgtattacttatgggtaatgaatcaacggatcctgcactaat
gtacttcccagttttctcaaaggtaacgaattgagaaaactgggaagtac
attagtgcaggatccgttgattcatttttcaataTTGCTCCCCTTCaaat
tttgtactatttttttCCAGGATGATGAGATTATTACAAATATTGAGGAA
AGGAAAAAGCAAAATACCAGGAACTTTTCTTTTCACCAGTTCGATTCGAT
GGAAATCTTATCAAGCTCTTCGAAATGCATTATCTGCTGAAGAAATTTAT
TCAGAGCTGATTAAAGGTAACAGAGGAGCTTTAGCTAAAGGTATTACTTT
AACAGAATCGACAAGACAGGATCACATTGATGAAGCCCATAAACTTTTAC
ATCTAACTTTGGAGTATTTAAAGAATAAACAAACTGAGAAACCAACTTTT
CGCATTGGACTAACCGGTTCGCCTGGTGCTGGGAAAAGTACCTTAATTGA
AACTCTTGGAAAACAATTAACTTCGTTGGGTCATAAAGTTGCTGTTTTGG
CTGTCGATCCTTCTTCTGCCAAAACAGGTGGATCGCTGCTTGGTGATCGA
ACTCGAATGGTCGAACTTTCTCATGACCCAAATGCTTTTATACGACCTTC
CCCCTCGTCAGGGACTCTAGGTGGTGTCACAAGGAGAACAAATGAAGCTA
TTGTTTTATGTGAAGGCGCCGGTTATGACATTATTCTTGTCGAGACAGTT
GGCATCGGACAATCTGAATTTGCTGTTTCGAACATGACGgatatgtttgt
tttgattatacCTCCTGGTTCAGGGGACGAGTTACAAGGGATTAAGAAAG
GTGTTGTTGAGATGGCTgacttagttcttataaacaaagCAGATGGAGAT
TTATTACCAGCCGCTAGAAAAGTTCAAACTGAATATATGAGTGCTTTGAA
ACTATTACAAAGACCAGGTGCTAAATGGACTCCTAAGGTTTATCCAGTTT
CAGCTCTTCATAATGAGGGTCTTGATAAAGCTTGGTGGAAAATAGAACAG
TATAAAAGCAAAATGTTAGAAGATGaaacttttcttcaaagaaGAAAACA
CCAATATAAATCATGGATGTGGAATTATGTTCAAGACAATATCATGGAAC
GATTTCTATCCAATGAGAAAGTTAAAAATCGTATCAAGCATTTTGAGATA
CTGGTTGAAAATGAACAGGTTCATCCCGCATTTGCTGCTGATGAACTGTT
GAAGATTTTtacaaatgaaaattaattattttatttttagatttcaaata
GCAAAGATTATCGAGAGTGTGATTGCCGAGGGTTTtgttcaaacttcttt
tccgTAAATAGTTTCAATGACATCTAACTTCCTAGTTTGTATTTCAACAT
AACGTAATTATTTCCTTCCCAATTGGTTAAAAACGCATTTTTGACGAGGA
ACCTTCCTTGTCTGTATCACTCAGATGAGatgtgtttttataagatactt
taataattggtcatttgaagtaataaaaatgacgcgttctttagaaaaag
taacaaaattgttttattactggttaacgaccaaacaagtcaaataagag
cttgtaaaaactacgTCTCGTCCCGTATCACTCGACCCTACACATCATTT
TATTCGTGGTAACATAAAGCACAACTTATTGtaactaaaaattttaaatg
ttaattttcttgtatagttttataaaaagctttttaattttgatattgtt
ttcATATCTTTAGAATATTTTACCTAGAGTTTTCTTTGAGAGTTAAAAac
gaaatatttcttttcaatttacAGTATGTTTAACGAAGTTAttacatcaa
atttgatttatcCTTTtcgttttcgattttttctaTATACCTGTCTTAGT
GAGCTAGTCTTTGGTGACGGGATGAGAGTTCATCGCACTGTGGGGATTAA
ATTATTAACGAGCAATTTCTTGAGATAATTTGAGGTAGAGATATATGATA
TC Coding sequence (CDS) from alignment at sc0000086_pilon:631744..635795+ >MSTRG.11756.1.p1 ID=MSTRG.11756.1.p1|Name=MSTRG.11756.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000086_pilon:631744..635795+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGgatataccGATGATGAGATTATTACAAATATTGAGGAAAGGAAAAAG
CAAAATACCAGGAACTTTTCTTTTCACCAGTTCGATTCGATGGAAATCTT
ATCAAGCTCTTCGAAATGCATTATCTGCTGAAGAAATTTATTCAGAGCTG
ATTAAAGGTAACAGAGGAGCTTTAGCTAAAGGTATTACTTTAACAGAATC
GACAAGACAGGATCACATTGATGAAGCCCATAAACTTTTACATCTAACTT
TGGAGTATTTAAAGAATAAACAAACTGAGAAACCAACTTTTCGCATTGGA
CTAACCGGTTCGCCTGGTGCTGGGAAAAGTACCTTAATTGAAACTCTTGG
AAAACAATTAACTTCGTTGGGTCATAAAGTTGCTGTTTTGGCTGTCGATC
CTTCTTCTGCCAAAACAGGTGGATCGCTGCTTGGTGATCGAACTCGAATG
GTCGAACTTTCTCATGACCCAAATGCTTTTATACGACCTTCCCCCTCGTC
AGGGACTCTAGGTGGTGTCACAAGGAGAACAAATGAAGCTATTGTTTTAT
GTGAAGGCGCCGGTTATGACATTATTCTTGTCGAGACAGTTGGCATCGGA
CAATCTGAATTTGCTGTTTCGAACATGACGgatatgtttgttttgattat
acCTCCTGGTTCAGGGGACGAGTTACAAGGGATTAAGAAAGGTGTTGTTG
AGATGGCTgacttagttcttataaacaaagCAGATGGAGATTTATTACCA
GCCGCTAGAAAAGTTCAAACTGAATATATGAGTGCTTTGAAACTATTACA
AAGACCAGGTGCTAAATGGACTCCTAAGGTTTATCCAGTTTCAGCTCTTC
ATAATGAGGGTCTTGATAAAGCTTGGTGGAAAATAGAACAGTATAAAAGC
AAAATGTTAGAAGATGaaacttttcttcaaagaaGAAAACACCAATATAA
ATCATGGATGTGGAATTATGTTCAAGACAATATCATGGAACGATTTCTAT
CCAATGAGAAAGTTAAAAATCGTATCAAGCATTTTGAGATACTGGTTGAA
AATGAACAGGTTCATCCCGCATTTGCTGCTGATGAACTGTTGAAGATTTT
tacaaatgaaaattaaATGgatataccGATGATGAGATTATTACAAATAT
TGAGGAAAGGAAAAAGCAAAATACCAGGAACTTTTCTTTTCACCAGTTCG
ATTCGATGGAAATCTTATCAAGCTCTTCGAAATGCATTATCTGCTGAAGA
AATTTATTCAGAGCTGATTAAAGGTAACAGAGGAGCTTTAGCTAAAGGTA
TTACTTTAACAGAATCGACAAGACAGGATCACATTGATGAAGCCCATAAA
CTTTTACATCTAACTTTGGAGTATTTAAAGAATAAACAAACTGAGAAACC
AACTTTTCGCATTGGACTAACCGGTTCGCCTGGTGCTGGGAAAAGTACCT
TAATTGAAACTCTTGGAAAACAATTAACTTCGTTGGGTCATAAAGTTGCT
GTTTTGGCTGTCGATCCTTCTTCTGCCAAAACAGGTGGATCGCTGCTTGG
TGATCGAACTCGAATGGTCGAACTTTCTCATGACCCAAATGCTTTTATAC
GACCTTCCCCCTCGTCAGGGACTCTAGGTGGTGTCACAAGGAGAACAAAT
GAAGCTATTGTTTTATGTGAAGGCGCCGGTTATGACATTATTCTTGTCGA
GACAGTTGGCATCGGACAATCTGAATTTGCTGTTTCGAACATGACGgata
tgtttgttttgattatacCTCCTGGTTCAGGGGACGAGTTACAAGGGATT
AAGAAAGGTGTTGTTGAGATGGCTgacttagttcttataaacaaagCAGA
TGGAGATTTATTACCAGCCGCTAGAAAAGTTCAAACTGAATATATGAGTG
CTTTGAAACTATTACAAAGACCAGGTGCTAAATGGACTCCTAAGGTTTAT
CCAGTTTCAGCTCTTCATAATGAGGGTCTTGATAAAGCTTGGTGGAAAAT
AGAACAGTATAAAAGCAAAATGTTAGAAGATGaaacttttcttcaaagaa
GAAAACACCAATATAAATCATGGATGTGGAATTATGTTCAAGACAATATC
ATGGAACGATTTCTATCCAATGAGAAAGTTAAAAATCGTATCAAGCATTT
TGAGATACTGGTTGAAAATGAACAGGTTCATCCCGCATTTGCTGCTGATG
AACTGTTGAAGATTTTtacaaatgaaaattaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000086_pilon | genome | sc0000086_pilon:631744..635795 + |
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