MSTRG.11751.1.p1 (mRNA) -

Overview
NameMSTRG.11751.1.p1
Unique NameMSTRG.11751.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000086_pilon:563546..564773+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11751.1.p1 ID=MSTRG.11751.1.p1|Name=MSTRG.11751.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1228bp|location=Sequence derived from alignment at sc0000086_pilon:563546..564773+ (Clytia hemisphaerica_ch_hm2_pilon)
agagaccaaactttcaagaaaaaacatatCAGGTAGTGAAGTCATTTTTC
GGCAAGCACGTTCAAGGCACACGAGTTATGTTCACAATTCATCATAATGG
CGGAAGAAGCATTTAagccaattttcaaaatggatttttttGACTACATC
AGTTTAGTGTTGAGTATTTTGGTTATCATTTTACATTCGTATGGGTTAAA
ACTCCTACAGACGATCAATCAAACGAGCGGTGAGAAACACATCTTCATTG
CAAATTTTTCACTATGGAACATTTTTTGGGCATTAAGTAATTTGGTACGT
TACCCATTGATCAGATATGGTTCAGACAGAGTGTTCACTTATTGGACATT
GGTAATTGAAGGAGCGCGTATTCCTTTTTATATGGCCATCTTCTACATCA
CTATCGACCGATTTCTACAGCTCTATCTACACATGCGTTACCATCGTTGT
TTTTTCAAGAAACGTAAAATCTTACTAAGTGTTTTACCGTGTGTAGCATA
CCTTATCTGGCTTGCAACAACATTACCATTGTTCACTAAAGATATAATTA
CATTTGAAGTCTTGATTTTATGTACTTCGCTTTATATTTCGGGCGCGTTT
CATGTTCTAATTTTAGTAACTTTTGTAACCATCTACTCATACATCAGTCA
GAAATTATGGCGAGCAAGCAGACATGCTATTGGAAAACGAAAATCGTCTT
TGAAGAAACTTGCAGTACCTTTTATTATCGTtatcactttcattttatta
gaAACGTTACCTGACGGCTTTATCTTCTTTGGGCTCGCGCATTACGGTGG
ATGGACAATATTTTTATTCCGCCTAGATGCTCTTTCGAACGCTTTAGTCT
ACATTTTCTTACAACCAAGGATTAAATACCAAGTTGGAAAACAAATGCAA
AAAGGGACCGACTTTTTGAGTTGCCATTCACGCACAACTGCTAGAATGGA
GAAATCGAGTAAATCAAGTAATCTTACTGGCAGTTCCGGTAACTCGTGAA
TATTGTTTCTCGATACTTTTTGATCTTATTTGAGTTCTATGAAATAAgat
tatttataattttactGTTGTAAATGTTGTAAAAATGAATTATGCTTTTT
GTACTGAGTTGCTTCGAAACAAATACAGTCACTAATTCATAAAGAGCTGA
AAGTTATCGATACAGGGGTCGAACATGATTACGAGGCTGTGGTGGTAGAT
AGCAAAATAAATATCGATACAAATATAT

Coding sequence (CDS) from alignment at sc0000086_pilon:563546..564773+

>MSTRG.11751.1.p1 ID=MSTRG.11751.1.p1|Name=MSTRG.11751.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=903bp|location=Sequence derived from alignment at sc0000086_pilon:563546..564773+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGAAGAAGCATTTAagccaattttcaaaatggatttttttGACTA
CATCAGTTTAGTGTTGAGTATTTTGGTTATCATTTTACATTCGTATGGGT
TAAAACTCCTACAGACGATCAATCAAACGAGCGGTGAGAAACACATCTTC
ATTGCAAATTTTTCACTATGGAACATTTTTTGGGCATTAAGTAATTTGGT
ACGTTACCCATTGATCAGATATGGTTCAGACAGAGTGTTCACTTATTGGA
CATTGGTAATTGAAGGAGCGCGTATTCCTTTTTATATGGCCATCTTCTAC
ATCACTATCGACCGATTTCTACAGCTCTATCTACACATGCGTTACCATCG
TTGTTTTTTCAAGAAACGTAAAATCTTACTAAGTGTTTTACCGTGTGTAG
CATACCTTATCTGGCTTGCAACAACATTACCATTGTTCACTAAAGATATA
ATTACATTTGAAGTCTTGATTTTATGTACTTCGCTTTATATTTCGGGCGC
GTTTCATGTTCTAATTTTAGTAACTTTTGTAACCATCTACTCATACATCA
GTCAGAAATTATGGCGAGCAAGCAGACATGCTATTGGAAAACGAAAATCG
TCTTTGAAGAAACTTGCAGTACCTTTTATTATCGTtatcactttcatttt
attagaAACGTTACCTGACGGCTTTATCTTCTTTGGGCTCGCGCATTACG
GTGGATGGACAATATTTTTATTCCGCCTAGATGCTCTTTCGAACGCTTTA
GTCTACATTTTCTTACAACCAAGGATTAAATACCAAGTTGGAAAACAAAT
GCAAAAAGGGACCGACTTTTTGAGTTGCCATTCACGCACAACTGCTAGAA
TGGAGAAATCGAGTAAATCAAGTAATCTTACTGGCAGTTCCGGTAACTCG
TGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11751MSTRG.11751Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11751.1.p1.exon1MSTRG.11751.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11751.1.p1MSTRG.11751.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086_pilongenomesc0000086_pilon:563546..564773 +