|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:3287586..3290598+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1175.1.p1 ID=MSTRG.1175.1.p1|Name=MSTRG.1175.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3013bp|location=Sequence derived from alignment at sc0000005_pilon:3287586..3290598+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttgtttcagaaaaatattgaagatttttttcgaataaaaaGACTTGA
AAAATACTACAACTATAAAGATTATGTTTGGTAAGTTTAATTTGAGTTGT
CCCGAAGGGATCCAAAATTTATATAtgtgtgaagaaataagaattttatt
cACTCAGAAGATTTGTGTGGCAGAGCAGTTGTAtacatttcgtccttatt
gggACTCATCAGCACACTGCATACTGCACTCTGGCTGGCTAAATCGATTT
ATCTCTGACGACCACAAAATCACTTTAGGTTTGAACTGAGACAGTGGACA
GTAGGGAAATTCTCTACGTGACTCTTTGCAGACTTACTAAAAGTATATAT
ACACTCTGCAAGAACTTTATGTATGTCTTTACCTTTCAATGTggcgaaaa
caaatttttctgaTGAAGCTTTTTAAATATGATGCTCTGTCGTTTAGGAA
ATCATTTTGGGAGACGGAAATCATTCCACCGACACCCTTCGGAAGCCAAC
CTACCCTCATGTATCATTCATGATAATCATTATGTTAATTGGTACGATAA
TCGATACAATAATTATTCCAGAGATTTTTGGGGTTTCGACCATGGACCAT
TGACTGCTTTTACCTGCTCATTCTCATCTAATAACTCTAACATCTATAAT
GTGTGTTTTGCCCTGGAGGAGCAAGTATCATCATACAATGCTAGTAATTC
AACAGGATTCGAATCTGTGGCTGCTTTTTATGAATATGATGGTATAAAGG
AAGAACCTAAGAAACGTAAAAAGGAGAAGAAGGTTGATGAAGATGCTTGG
AAACTGAACCCCATTGTTCAGGCAATAATGAAAAGAGATGAGGAACAAGC
AGCCGCGAATCCCAAGGCCATTGAAGTAGTTTCTGATGGCGATTCCTGGA
GTACTGTAGAAGAAGAAACAGTTTGCTCTTCTGGTGTAGGGGATGATGAT
GAATTTGATGAATTTGTTGGTGAAATTAAAGAACTTAACAGCTTTGGTGA
TAAATCAAATGACATTGACAATTATCCAACAGATGGATATAGGAGTGGTG
GTGGTGtttctcttgggattggtttgaATGATGATATTGAATGTCAATTG
TTAGATTCAGATAGTAGTTCTGATGAAAATGTGGACACTGAAACTAAGAA
AACCGAAAGAAAAGATACTGCATCTAGATTTATTAACGGTATCAATTTAG
ATACGTATGATGTCGATTCTGGTAAAATTTTCAGTAGTGTATCCTGTGAT
ATTTATCAGAGAGATTTGGATGCCAATGCTTCTGAATCCAATTCTGGAGA
TTCTGACATCATTGAAATGGGTTGTTTTGGTAAAAATGATAACATTGACT
ATGAACAGAGTACAACTGCTAAGAAAAGGCGGATTTGTTTCAGTAATGGT
GAAGCCAAATATGAATCTGATGATGAGATAAATGTAGTTAATTGCAGATG
TAATGGTAAAAACTATAAACAACTTAATGTTTCCAACAAAGTTAAACCTG
GTGACCAGGAAATTGGAGATTCTCCCGGAAACAATTCCAATGAACAGGAA
CTTTCAAACAAATCCTACGTTGATGAAATGAATTATAATGGTATTGGTGA
TATTGATAATACCGATGAAGAAGACAGTTTCGATgaggaaaacgaaagtg
aaagtgaagagCCAGAAGAAGAATCTGATGATTGGGAAAATATGGATATG
GATACATATTGCAAAAGGATCATGGGTGATTTGATATACCCTGTCACTGT
ATTTATTGATAACACACCACTTCCTTTACCACGATTTTCTAAATGTCAAC
GtttttttACTGTACTGAAAGCCAAGACAATCGATGGATTGAAATGTatt
aaaatgcttgaaaaagaCCGTTTGGAAGATGGGAAAGATGCATCGGTTGA
GACTTTTGTGTTGCCTTGTAAAGGTGAAGGTTTTGTAACCCAGAATGATG
TTTGTATGTTGGCTATAGGTGACTTATATGCAGTTACTGCCAGGCGAAAT
GTACATACTAATGATACTTTAGTGTTTTGGAAAGTAGCCCTCAAAAGATG
GACCAAGGATGAAATGTATTTGAAATATAACTGGACGTTGGAACCAAatg
attatttttcttcatcTGATTTTGGTGCATCGAATCGCCTTCAAGTGATT
GATTATGAGTTTTCATCTAACGGGCAATGCATTACTTTATTGATGCAAAA
TGGTTTCATTTTCACTGTTGATATTCAAAGAAAACATCAGGTCTGGCAAG
TGTACCTACCACCAGGTGGCGATCGAATGGTCAAACAACTTACCTTACAT
CCAACATTGAACGCTACATTAGTATTTGCAATGAAAAACGAATGTTATTC
ACTGGATTGTAGCTCCAAATCACAATCATGGGATATGATTCAATCAGTCA
TTGAATTACCAAGAGATTACATCATCAATTACATCACCTTTTCTCAAAGT
AGAGATCTACTATCCCTCTGTACTGGCCCTGAAGGAGACGTGTTCATTTA
TTCAGTAGATAAACACCAATATAATCAACTTTTTAAACTTGAACATGATA
CAGTGGCATCTGCAATACACTGTGATTTTTCATGGACGTCTGAAGAACTT
TTAGTGTCTTATGGTGATGCTGACTATCGAATCTGGCAATTGCCAAAGCA
TCTTAAGTTGAAAAAGATTGCTAGAATTCAATTCCTAAAATTAGTTCGTG
GTTGTCATATAAACCAGTTGAAATTACCAAATTCATTGAAAgaatattta
ctattttaagTATCTTTTACAATAACGTATGCTCCGGAgtacttttatga
aatttgttttctctctgttctttgtcgaattttttactttttggattatc
ttttttcactttttcaccaagattttgaattaaaaaaagttatcttGATA
ATCGTAAGGATTAATCTCAAGTATCGCTTTGAAATCTCAATATACCGACC
ACCAAGCAGTTATTATCAACCATACATTTATAAATCCCGAAgcgctagat
gtcgtgctttata Coding sequence (CDS) from alignment at sc0000005_pilon:3287586..3290598+ >MSTRG.1175.1.p1 ID=MSTRG.1175.1.p1|Name=MSTRG.1175.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4638bp|location=Sequence derived from alignment at sc0000005_pilon:3287586..3290598+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGGAAATCATTTTGGGAGACGGAAATCATTCCACCGACACCCTTC
GGAAGCCAACCTACCCTCATGTATCATTCATGATAATCATTATGTTAATT
GGTACGATAATCGATACAATAATTATTCCAGAGATTTTTGGGGTTTCGAC
CATGGACCATTGACTGCTTTTACCTGCTCATTCTCATCTAATAACTCTAA
CATCTATAATGTGTGTTTTGCCCTGGAGGAGCAAGTATCATCATACAATG
CTAGTAATTCAACAGGATTCGAATCTGTGGCTGCTTTTTATGAATATGAT
GGTATAAAGGAAGAACCTAAGAAACGTAAAAAGGAGAAGAAGGTTGATGA
AGATGCTTGGAAACTGAACCCCATTGTTCAGGCAATAATGAAAAGAGATG
AGGAACAAGCAGCCGCGAATCCCAAGGCCATTGAAGTAGTTTCTGATGGC
GATTCCTGGAGTACTGTAGAAGAAGAAACAGTTTGCTCTTCTGGTGTAGG
GGATGATGATGAATTTGATGAATTTGTTGGTGAAATTAAAGAACTTAACA
GCTTTGGTGATAAATCAAATGACATTGACAATTATCCAACAGATGGATAT
AGGAGTGGTGGTGGTGtttctcttgggattggtttgaATGATGATATTGA
ATGTCAATTGTTAGATTCAGATAGTAGTTCTGATGAAAATGTGGACACTG
AAACTAAGAAAACCGAAAGAAAAGATACTGCATCTAGATTTATTAACGGT
ATCAATTTAGATACGTATGATGTCGATTCTGGTAAAATTTTCAGTAGTGT
ATCCTGTGATATTTATCAGAGAGATTTGGATGCCAATGCTTCTGAATCCA
ATTCTGGAGATTCTGACATCATTGAAATGGGTTGTTTTGGTAAAAATGAT
AACATTGACTATGAACAGAGTACAACTGCTAAGAAAAGGCGGATTTGTTT
CAGTAATGGTGAAGCCAAATATGAATCTGATGATGAGATAAATGTAGTTA
ATTGCAGATGTAATGGTAAAAACTATAAACAACTTAATGTTTCCAACAAA
GTTAAACCTGGTGACCAGGAAATTGGAGATTCTCCCGGAAACAATTCCAA
TGAACAGGAACTTTCAAACAAATCCTACGTTGATGAAATGAATTATAATG
GTATTGGTGATATTGATAATACCGATGAAGAAGACAGTTTCGATgaggaa
aacgaaagtgaaagtgaagagCCAGAAGAAGAATCTGATGATTGGGAAAA
TATGGATATGGATACATATTGCAAAAGGATCATGGGTGATTTGATATACC
CTGTCACTGTATTTATTGATAACACACCACTTCCTTTACCACGATTTTCT
AAATGTCAACGtttttttACTGTACTGAAAGCCAAGACAATCGATGGATT
GAAATGTattaaaatgcttgaaaaagaCCGTTTGGAAGATGGGAAAGATG
CATCGGTTGAGACTTTTGTGTTGCCTTGTAAAGGTGAAGGTTTTGTAACC
CAGAATGATGTTTGTATGTTGGCTATAGGTGACTTATATGCAGTTACTGC
CAGGCGAAATGTACATACTAATGATACTTTAGTGTTTTGGAAAGTAGCCC
TCAAAAGATGGACCAAGGATGAAATGTATTTGAAATATAACTGGACGTTG
GAACCAAatgattatttttcttcatcTGATTTTGGTGCATCGAATCGCCT
TCAAGTGATTGATTATGAGTTTTCATCTAACGGGCAATGCATTACTTTAT
TGATGCAAAATGGTTTCATTTTCACTGTTGATATTCAAAGAAAACATCAG
GTCTGGCAAGTGTACCTACCACCAGGTGGCGATCGAATGGTCAAACAACT
TACCTTACATCCAACATTGAACGCTACATTAGTATTTGCAATGAAAAACG
AATGTTATTCACTGGATTGTAGCTCCAAATCACAATCATGGGATATGATT
CAATCAGTCATTGAATTACCAAGAGATTACATCATCAATTACATCACCTT
TTCTCAAAGTAGAGATCTACTATCCCTCTGTACTGGCCCTGAAGGAGACG
TGTTCATTTATTCAGTAGATAAACACCAATATAATCAACTTTTTAAACTT
GAACATGATACAGTGGCATCTGCAATACACTGTGATTTTTCATGGACGTC
TGAAGAACTTTTAGTGTCTTATGGTGATGCTGACTATCGAATCTGGCAAT
TGCCAAAGCATCTTAAGTTGAAAAAGATTGCTAGAATTCAATTCCTAAAA
TTAGTTCGTGGTTGTCATATAAACCAGTTGAAATTACCAAATTCATTGAA
AgaatatttactattttaaATGTTTGGAAATCATTTTGGGAGACGGAAAT
CATTCCACCGACACCCTTCGGAAGCCAACCTACCCTCATGTATCATTCAT
GATAATCATTATGTTAATTGGTACGATAATCGATACAATAATTATTCCAG
AGATTTTTGGGGTTTCGACCATGGACCATTGACTGCTTTTACCTGCTCAT
TCTCATCTAATAACTCTAACATCTATAATGTGTGTTTTGCCCTGGAGGAG
CAAGTATCATCATACAATGCTAGTAATTCAACAGGATTCGAATCTGTGGC
TGCTTTTTATGAATATGATGGTATAAAGGAAGAACCTAAGAAACGTAAAA
AGGAGAAGAAGGTTGATGAAGATGCTTGGAAACTGAACCCCATTGTTCAG
GCAATAATGAAAAGAGATGAGGAACAAGCAGCCGCGAATCCCAAGGCCAT
TGAAGTAGTTTCTGATGGCGATTCCTGGAGTACTGTAGAAGAAGAAACAG
TTTGCTCTTCTGGTGTAGGGGATGATGATGAATTTGATGAATTTGTTGGT
GAAATTAAAGAACTTAACAGCTTTGGTGATAAATCAAATGACATTGACAA
TTATCCAACAGATGGATATAGGAGTGGTGGTGGTGtttctcttgggattg
gtttgaATGATGATATTGAATGTCAATTGTTAGATTCAGATAGTAGTTCT
GATGAAAATGTGGACACTGAAACTAAGAAAACCGAAAGAAAAGATACTGC
ATCTAGATTTATTAACGGTATCAATTTAGATACGTATGATGTCGATTCTG
GTAAAATTTTCAGTAGTGTATCCTGTGATATTTATCAGAGAGATTTGGAT
GCCAATGCTTCTGAATCCAATTCTGGAGATTCTGACATCATTGAAATGGG
TTGTTTTGGTAAAAATGATAACATTGACTATGAACAGAGTACAACTGCTA
AGAAAAGGCGGATTTGTTTCAGTAATGGTGAAGCCAAATATGAATCTGAT
GATGAGATAAATGTAGTTAATTGCAGATGTAATGGTAAAAACTATAAACA
ACTTAATGTTTCCAACAAAGTTAAACCTGGTGACCAGGAAATTGGAGATT
CTCCCGGAAACAATTCCAATGAACAGGAACTTTCAAACAAATCCTACGTT
GATGAAATGAATTATAATGGTATTGGTGATATTGATAATACCGATGAAGA
AGACAGTTTCGATgaggaaaacgaaagtgaaagtgaagagCCAGAAGAAG
AATCTGATGATTGGGAAAATATGGATATGGATACATATTGCAAAAGGATC
ATGGGTGATTTGATATACCCTGTCACTGTATTTATTGATAACACACCACT
TCCTTTACCACGATTTTCTAAATGTCAACGtttttttACTGTACTGAAAG
CCAAGACAATCGATGGATTGAAATGTattaaaatgcttgaaaaagaCCGT
TTGGAAGATGGGAAAGATGCATCGGTTGAGACTTTTGTGTTGCCTTGTAA
AGGTGAAGGTTTTGTAACCCAGAATGATGTTTGTATGTTGGCTATAGGTG
ACTTATATGCAGTTACTGCCAGGCGAAATGTACATACTAATGATACTTTA
GTGTTTTGGAAAGTAGCCCTCAAAAGATGGACCAAGGATGAAATGTATTT
GAAATATAACTGGACGTTGGAACCAAatgattatttttcttcatcTGATT
TTGGTGCATCGAATCGCCTTCAAGTGATTGATTATGAGTTTTCATCTAAC
GGGCAATGCATTACTTTATTGATGCAAAATGGTTTCATTTTCACTGTTGA
TATTCAAAGAAAACATCAGGTCTGGCAAGTGTACCTACCACCAGGTGGCG
ATCGAATGGTCAAACAACTTACCTTACATCCAACATTGAACGCTACATTA
GTATTTGCAATGAAAAACGAATGTTATTCACTGGATTGTAGCTCCAAATC
ACAATCATGGGATATGATTCAATCAGTCATTGAATTACCAAGAGATTACA
TCATCAATTACATCACCTTTTCTCAAAGTAGAGATCTACTATCCCTCTGT
ACTGGCCCTGAAGGAGACGTGTTCATTTATTCAGTAGATAAACACCAATA
TAATCAACTTTTTAAACTTGAACATGATACAGTGGCATCTGCAATACACT
GTGATTTTTCATGGACGTCTGAAGAACTTTTAGTGTCTTATGGTGATGCT
GACTATCGAATCTGGCAATTGCCAAAGCATCTTAAGTTGAAAAAGATTGC
TAGAATTCAATTCCTAAAATTAGTTCGTGGTTGTCATATAAACCAGTTGA
AATTACCAAATTCATTGAAAgaatatttactattttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:3287586..3290598 + |
|
