|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:451466..459640+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11742.5.p1 ID=MSTRG.11742.5.p1|Name=MSTRG.11742.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8175bp|location=Sequence derived from alignment at sc0000086_pilon:451466..459640+ (Clytia hemisphaerica_ch_hm2_pilon) TGATATTCATTTCCCGTGACCTTTGACCTTCATTCAACTTCATCGTAATT
TGTTCAACATTtcaaaatcggaaaataaaccaaaacTCACTTTTTAACAT
TCTCTTCTTTTATTTATCTCATTATAGGTCCAACGGATGGGTCCTCGGCC
TCGACGACGGCGTTGGCGATCCAAGGCTTCACATACGATGCAGCATCTGG
TTATTATTATGACTCGAACACTGGTCTATACTATGACTCGTCTACTGGGG
TGAGCTACTTAAAAATTTCCGGACGAAAGTTCAATTAAAGAAAACGCCTA
AGAATATCTACTTACTCGAGGGTAACTAAAAGACTGGGGTGtggttgaaa
aaaattcgaacttaaaggttttggttttatataagagtgatattgtttgc
ttactcatcaattttaattcacaagctttttaacaCTAAATTGACACATA
TGTGGAGCAAGAGTTGTCCGAATGAGGAAaggttttttgcttatatcagc
ataatataacagtAGACAGACACTGGTCTTATATAAAATAtgtatctgat
atgaaacgggaacacttatgtaaaaataaaacctttaaaaattagGGATA
AAGGAATGAACACATCATTATCAAAATCGGCggattttttgaagatttac
aGCAAAAGAAGATTAGGAACTTGaacaaacattttccaaaagaaattttt
agcaGAGTGGTAGGCTTAGGGTTAGACAGGGCGGGATCTTTTTAGTTTGA
CGGAAGTAAGTTGTTACTGTTCAGTATCCTTTAACTTTTGCATTAGTTct
atacttgaaaaaaaaaacggtaaTTCAAGGATAAATTATACTCAAAACCA
TAATTTTAAGAATGTTCTCCGTcgttctttttcaatttctcttattcgat
gaaaatattTAGTTCCAGCTAAATCTAGtttgaatcacagacctctacaa
agcTGGCTGGTATCTATAAAAGAAGCACGATTTCGATCGTATTCTTTAGA
GGGTGCAAGCAGTCTAGAGGAAATCAAATCATAGAGAGagtctatttaaa
aaaaaaaatttattacgtTTTAGTATTACTACAACAGCACTACAGAACAG
TGGTTACAATGGGATGGTACTCAATATCACGTGATCAATCAAGACGGGTA
TACCTACTCTCTTTTctctttcatattttcattaCTATTTTGTTGGCTGG
AAAGTATTGTTTTGACTGTTCGGGGCACAAATTCCTGTTAATTTAGGAGG
AATTGGTAtttttttCCCATATCTAAAGTAAGAATTTATAGTTATAAATT
CTTACTTTAGATATGGGaaaaaaaTACCGATTCCAGATATTTCTCGAAAA
TAACATATCCAATTGAGAATATACACCCCTGCAGTGTCTTCTTTCTATTT
TTATAGCAGTTGTTTGGTTGCAAGTATCATATTGTGTCGACAAAAACAAC
AACTGAAAAGCACATTGCAGTGCCGCATATTATAAATTAACGGGTCCATT
TTCAACTATCGTCTTAGTCCTATCTTTTCGCCTTTTTATAGATCTCTGGC
TGGTCAACCTTCACAAcagaaacaacaacaacagcacgCGATAAAACAAC
CTCCACCGCCCTCCACGCCTAACCCTGCTGCTGCTCATCAAACACAGGTA
CTCATACTATTTACTCTCATAACAAACCAAGATATTAGACTGCAGTCGTT
TATAATACATGTTATACAGTAATATGAGTGTTATATGACAATACGGtgat
tgttacgggataatatcagaCTACTGTTATTCAGATTCGGGATTTTTTGG
GTATCTTATGTATTTCAAGATCGAAATTAAATTAGTCACTTTCATATCTT
AAAACACATtagatgtaaaaataaaataacctAATTGTTATTCGCTGTTC
GCTGTAAAAAGTGtgactttgaaaataatttatcacGTGAATGGCCAGAA
CATGGAAGAATCTTCCGAGGTTGTTTTATTTAGCGTGGATATTGACAGGT
TTAAGGTGGAATTAATGCCTTTATGTCCGAATACTAGACACTATAGTAGA
ACTTTGAGAAAATCATTACTTCCACACTCAAAAAATCTCTTtccccttta
aaaaaaaaccttctttAAAAAGTTCGAAAGTTCAAATTTACATATCGATA
TGTTTTGGAAGAGACAAAATTAAAAGCAGATTTTcaggtattttttttta
aatttcattatatAGTTACTTGAACCGTACGACTAGAACATAATCTACTT
ATTTTGTCTACCTtcagcaacaacaacagcagcattatacacaacaaaac
caatattcacaacaactccaaccacaacaGCTATCAAAGAGTATCAGCAC
ACCCGCTCAAAATGCATTAATGATAGCCTCTGATCAACACCAAAAGAACC
AACTGCAGGCTGGTACACCCGGTCAACAGGCTAGTGGAGAATCAGGTAAC
CTTGGTGACCAAATCTAGTTCTCTGACTAGCTCTAATCTCTAGTGTGCGT
CGCAAACATCTAAAGATTTACTTCCTATATAGGCATTTTTGGGAGAGAGG
ATAATATATCGAGTATTACGTAGtctttataagaaactcttttcgcttAG
ATGCTGAGTAGTAGCCTACCTAATCTCCGACTAGATTTTGATTACTTAAC
GCGGGCGCGTATGCACTCTAAGAGCAATGTCCAggttgatctttttcatc
caaatttgggatgaatattaGATCAAACGAGCTGTTGAGCGCGGTGCTTG
GCTAAGGCAAAACAATCACACCAAAATAAACTACGAATCATAAGCATAGA
ACatttaaaacattatttattttGGCTGAATAACCATTTCAGATCATTAT
ACTcgccatatccctttagagcatAGCGTGGTAAGCgttggatgatctgt
tatgagattaaaATTGCCCTGTTTCAGCTACTTGGTTGATTTAGGATGGA
TAGAGGGTCTGTGAAACGTGGACGAAGAATAACTATTGTTGATGCTGCTA
ACCTTATTTCAACTCAAATTTCATAATGTCGAGTTAAATTGCAAGCGATT
TATATTACTCTTGTTTAAtacttttctctcttttagTTCAATTGGGATTT
CAAAAACCAAAGAGTGCAAGAAAGGTACTTTTTGTCAATATCCTTTTATT
TCCGAATCGCAAAGACcagtaatttttttccatctaTCAATCTACTGCCA
AAACTTGATTGTAAGTCTAAAGATTTTTGAGGATCTTtaggaattttttg
aaatttaaggggAGGTAAAAAGGAAACTCTACCGTTCAAGCTCGAAAAAT
TTAGAATTATAGTCCTTAAATCCTCcttaaatatcaaaatttgaaataaa
ttttactaATCGTAACGTTTGCTTTCATAATggcgaaaaaaatttcttta
tgaaaaataaaagtcGAAACAGAAGCAAATTTACTGGCTCTTACTGAGaa
aaaaaCTTATACGACATTTTTTCTGAAAGGAAGTTGGTTTTTTAATAAAG
AGGTTTTCCATGTTTTGacaagttacgtaatttccaccattatgaaAGTG
AACGTTCGAtttggggacaagctggagtttttacaagctcttatttgatt
tggttggtcgttaagatgtaataaaagaatcttattactttttctaaaga
acgcgtcatctttatcactttaaatgaccaattagtgaagtatcttgtaa
aaactccaaggcatctctcGATTCGCGTTAGGGATTACCTCTACAGATTC
GATCCGTTAATCTTCTTTACCTTATACAGATTGCAAAAGACATGGAACGT
TGGGCGAAGAAACTAAACACACAGACAGAAACAAAGAAGGCGGCCGTCAA
ACAAGCACAACAAGAATTACGCATGCTCGAACAGAAAGAAGAAGAGttaa
gaaagaaaattcaaattggAAGCTCGCTCACTGAAAGTCTGGCTACTGTT
GCTAAAGCAAAGGTAcataagttttaaaaaatgtctcgaAACTCGTTCTC
ATCAATATTAAACCAGCAGACTTTGTTGGCCGTTCGCTGGATATGAATTT
CATGGAAGCTTAgtttataaatattttgaaactgTCATGACGGGTAGAAA
ACGACAGAAAATATGAACTTTTGGTTTGATCAATTTTGAGgaatagtccg
ggagccaaatcctatatctccttaaataagcacttttgcttaacccaaga
ttctacaggataaactatacatttttggaatcctaactatcctagtttaa
gaaatggtcggTCGCCAACCCTAATTACTggtcaatttttggacctacct
taaggtagtgtcctataaattaacccgtgttcgttagttagttcgttagt
acgttagttaccaacttttctcgagattggctcattcaatttttctgatt
ttttgcacaaaggtgcattactataaaccctcgaatgtgacggagcccga
ttttcgaaaaaaaattttttccggccggtagaaccggaaatgtcccgaaa
aaagcggttttttgagattttctcgagattttatcattagttttttgcga
ttttttgcacatagatgcacattagtactgccgaaaaggtgtcgaaaacc
gtttgccgaaaaaaaaaattttccggtctgtagaaccggaaatgtgccga
aaatcgtcgttttttcacatttccgtcacattttttcaacttatttaatt
gtttctttacagaaaaatgttctttatgatgatgcccaaaacttagcatc
gtttgatttccaaaaaaatcatcctttgaatccggaactccttaaaaatc
gccggaacagccgaaaaccggcgtaaaacggttttccttcattttttcaa
cttatactcgacagttTGTTTTTGACTACCCCCTCCCCCATTCTCCACCC
CGACACTCCTCAATCTgtgatgaaataatgaaaactgaaaattaaatgtt
ttttttacttcagttttaattttctctgaatgattgattaaagtgtcgat
attatttttctttcaccattaaacatcgatgcgtttcttaattgctttct
ccgttccaatagatatataaatcgaaatttaaaattatacattacttcca
ttaaattctaattattcgttttataaataggtaggtccattaaagtatta
cttgttcatactgggcccgagtttaggggggtaCTTTTAACCCTtcgtaa
ggatttgttaaggaaaatatctttccatgtatgatataatgtgctatatc
tcatgaatgaattgaccaattgctttgaaactttgccaaaagCTTCAAGA
TAGATTGGTGATCATCATTTGCAAAAagctttgtgaaaaattatttttgg
aggTTTCCCTGGGggaaaaatagggaaaatttgggtattttcgctgaatt
ttgacactttataagactgggacctaccaaaacaacttttaatgaggcac
aaactttgtgttatgataaaatttgatgcgaTACACCAGAAAATTATTTG
TCAACTGTATATACTATCATTTTCGAcgcttcagggggtaaaaataccca
ttttattgaatttttacataatttgagcaattttcactgtttatctcgcc
taaaatatcttcgaaaatagttttaacttgatctttGTGTATTATACACT
AGAAATTTACAATGctgacttgaaactttcacatACAGGGTGCAGTTTGa
gaaaccagggggtaaaattgccaaGTTTTGGGCCCATTTGACCCATAGAA
CAGTGTTAAGCTGTGCAAAGTTTGATTTCTAGCTGCTGGAAACATGGATA
TTTTTGGTAGGCAATAGATctatcttgaaacttttggcaaagtttcaaag
caattggtcaattcattcatgagatatagcacatatcatacatggaaaga
tattttccttaactaatccttacaaagggtaaaaagtaccccctaaactc
gggcccagtatgaaaaattgaccaggaatTAGCTTTGGGGACCATTTCCA
acactaggatagttgaggattctAaaaatgtatagtttatcctgtagaat
cttgggttaagcaaaatgctatttttcaggtttggctcccggactagaAG
TCAATAGCAGAAAACCAGTGGTTTTTGGTTCGCATCTTGGTCCTACCAAA
TTCTGCTCAAATCAAAgattaagggaacttattttagcGAGCaacaaaat
cctgaaaaattttggcgagaacttattttgacgaATGACAGGCTAAATCT
GtcctattttgccttattttgatcaattttgatgaattataTGAATTATT
CTGTCAAAATGCAAGGAAAATTCATTTTGGCGACAACTTATTTTGACGAC
TGAGTaaagtatttaattttggcgagaacttattttggggaaatttgtCT
AAGCAcaccaaattcgccaaaataagttcacTCAATGTAGCTGAGCCGGA
GTGCTCAGGTTGGTGGACCACTTTTATTCAGATTTGGAATGAATATTCAA
TGAGATTTTGAGCTCGGTGATAGGCTAGAACAAAACAATTGCACGAAAGT
TAAACGTCTATCGCAAACATTAGAACCCGGTCGcagtcactttcgttttt
agaGCAACGTGGCTTTGAATGTTTTGGTTGAACAATCGGGCCAGAGGTGT
GCACAGAATAAATGATCTGTTATAAGATTAGTAAAATGTTGACAATACTA
ACATACAGTTTTTTAATGAGAACGCCGAGACATTTTCtggattttaaaaa
tattcttgcCTCTGAAGCCTTTGGTTCTCATTTACTTTGTTTTTATGGAA
ACAACTTTTTTGATCAAGATATGCTGTAGTAATACTCTAAACTTTCCGAT
ACTTTATCGTTAGGATGGTATTCGATCGCTCTTCGTGCCAGACAATGACG
AAGAGGGTAGTGTCTTGAAGTTGGGATCAGCTCTCCAATCGAACAACCAA
AAACCTCGTAAGTATCGAtgactttattttatttatcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgttcgttcttccattaattcgttcatt
cttccattaattcgttcgttcttccattaattcgttcattcttccattaa
ttcgttcattcttccatcaattcgttcattcttccgtcaattcgttcatt
cttccgtcaattcgttcattcattcattttaggTTCCAGTCTTGTCGCCG
ATTACCCTGACGACGACTTTGACAAtgataatgacgtcatcgatgaaaGT
CAATTCGTTGATCTCTCCAAAATGGCATGTTTACTTTGTCAACGACAACT
GACCAGTCAAGAGAATTTGACAAAACATTTAACAATGTCGCAATTACACA
AGGTAATTAACCTGTAAACAAATTACCGGCAAAGAACTTTTTTGCATCAA
GGTGAAACCCCATAGCTAAATTCAAGTGACGAGTATCGAATTTATACTTT
CTTCTCCGACCACCCAAGATCCTTGAATGACTATTAACTTTTCTGTTTCT
GTTTGTCGATATAACTACCTTATATTTTCTGtcaatttaacaaaaatatt
ttggtaacaaggaaTttttgaaaaacttttgcctgatattttttttcgtt
ttttatcttCAGCAAAATTTAGAGAAATATAAACGAAGTAAGAAGAACAA
AAGGTAACGAAACGTTAAATGGCTGATTGTGAATACGCATGCGTAGAATT
GTGCAAATTTCTTCGGTGATGGCAAATAGACAAAAGGGAGAAAGGTCACT
TGGTTGTGACAAATGGCTATCGACAGCCTTACAGACAATTCTAAACCAAT
TGTGAATTTATTTTTACAATTGAGCTTCTGATTGTTGTAATTCTATAAAG
ACTTGAGCGCGCTGTGGACAATGTCGGATAAATACACACACAATAACGGA
CGAACACTTTCACGGCAACGGACATTTAAGTATTGTGTGACTTTTGAATG
GATATTAGTCCTAGCCGTTGTTATTATTCTGCATTACCTAGGGTTTTTTT
AAtatatataaatgaatatatcattttatttgataaaaattatatattga
AGGAAGACcatttcattcatcattcattcattctatctatgccccccccc
cagcggtttgcgtgaatgcgtgaatgggcttttttggttgcgtgaatgcg
tgaaaattgaaaaaaaattgcgtga Coding sequence (CDS) from alignment at sc0000086_pilon:451466..459640+ >MSTRG.11742.5.p1 ID=MSTRG.11742.5.p1|Name=MSTRG.11742.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3636bp|location=Sequence derived from alignment at sc0000086_pilon:451466..459640+ (Clytia hemisphaerica_ch_hm2_pilon) ATGATAGCCTCTGATCAACACCAAAAGAACCAACTGCAGGCTGGTACACC CGGTCAACAGGCTAGTGGAGAATCAGTTCAATTGGGATTTCAAAAACCAA AGAGTGCAAGAAAGATTGCAAAAGACATGGAACGTTGGGCGAAGAAACTA AACACACAGACAGAAACAAAGAAGGCGGCCGTCAAACAAGCACAACAAGA ATTACGCATGCTCGAACAGAAAGAAGAAGAGttaagaaagaaaattcaaa ttggAAGCTCGCTCACTGAAAGTCTGGCTACTGTTGCTAAAGCAAAGGAT GGTATTCGATCGCTCTTCGTGCCAGACAATGACGAAGAGGGTAGTGTCTT GAAGTTGGGATCAGCTCTCCAATCGAACAACCAAAAACCTCgTTCCAGTC TTGTCGCCGATTACCCTGACGACGACTTTGACAAtgataatgacgtcatc gatgaaaGTCAATTCGTTGATCTCTCCAAAATGGCATGTTTACTTTGTCA ACGACAACTGACCAGTCAAGAGAATTTGACAAAACATTTAACAATGTCGC AATTACACAAGCAAAATTTAGAGAAATATAAACGAAGTAAGAAGAACAAA AGGTAAATGATAGCCTCTGATCAACACCAAAAGAACCAACTGCAGGCTGG TACACCCGGTCAACAGGCTAGTGGAGAATCAGTTCAATTGGGATTTCAAA AACCAAAGAGTGCAAGAAAGATTGCAAAAGACATGGAACGTTGGGCGAAG AAACTAAACACACAGACAGAAACAAAGAAGGCGGCCGTCAAACAAGCACA ACAAGAATTACGCATGCTCGAACAGAAAGAAGAAGAGttaagaaagaaaa ttcaaattggAAGCTCGCTCACTGAAAGTCTGGCTACTGTTGCTAAAGCA AAGGATGGTATTCGATCGCTCTTCGTGCCAGACAATGACGAAGAGGGTAG TGTCTTGAAGTTGGGATCAGCTCTCCAATCGAACAACCAAAAACCTCgTT CCAGTCTTGTCGCCGATTACCCTGACGACGACTTTGACAAtgataatgac gtcatcgatgaaaGTCAATTCGTTGATCTCTCCAAAATGGCATGTTTACT TTGTCAACGACAACTGACCAGTCAAGAGAATTTGACAAAACATTTAACAA TGTCGCAATTACACAAGCAAAATTTAGAGAAATATAAACGAAGTAAGAAG AACAAAAGGTAAATGATAGCCTCTGATCAACACCAAAAGAACCAACTGCA GGCTGGTACACCCGGTCAACAGGCTAGTGGAGAATCAGTTCAATTGGGAT TTCAAAAACCAAAGAGTGCAAGAAAGATTGCAAAAGACATGGAACGTTGG GCGAAGAAACTAAACACACAGACAGAAACAAAGAAGGCGGCCGTCAAACA AGCACAACAAGAATTACGCATGCTCGAACAGAAAGAAGAAGAGttaagaa agaaaattcaaattggAAGCTCGCTCACTGAAAGTCTGGCTACTGTTGCT AAAGCAAAGGATGGTATTCGATCGCTCTTCGTGCCAGACAATGACGAAGA GGGTAGTGTCTTGAAGTTGGGATCAGCTCTCCAATCGAACAACCAAAAAC CTCgTTCCAGTCTTGTCGCCGATTACCCTGACGACGACTTTGACAAtgat aatgacgtcatcgatgaaaGTCAATTCGTTGATCTCTCCAAAATGGCATG TTTACTTTGTCAACGACAACTGACCAGTCAAGAGAATTTGACAAAACATT TAACAATGTCGCAATTACACAAGCAAAATTTAGAGAAATATAAACGAAGT AAGAAGAACAAAAGGTAAATGATAGCCTCTGATCAACACCAAAAGAACCA ACTGCAGGCTGGTACACCCGGTCAACAGGCTAGTGGAGAATCAGTTCAAT TGGGATTTCAAAAACCAAAGAGTGCAAGAAAGATTGCAAAAGACATGGAA CGTTGGGCGAAGAAACTAAACACACAGACAGAAACAAAGAAGGCGGCCGT CAAACAAGCACAACAAGAATTACGCATGCTCGAACAGAAAGAAGAAGAGt taagaaagaaaattcaaattggAAGCTCGCTCACTGAAAGTCTGGCTACT GTTGCTAAAGCAAAGGATGGTATTCGATCGCTCTTCGTGCCAGACAATGA CGAAGAGGGTAGTGTCTTGAAGTTGGGATCAGCTCTCCAATCGAACAACC AAAAACCTCgTTCCAGTCTTGTCGCCGATTACCCTGACGACGACTTTGAC AAtgataatgacgtcatcgatgaaaGTCAATTCGTTGATCTCTCCAAAAT GGCATGTTTACTTTGTCAACGACAACTGACCAGTCAAGAGAATTTGACAA AACATTTAACAATGTCGCAATTACACAAGCAAAATTTAGAGAAATATAAA CGAAGTAAGAAGAACAAAAGGTAAATGATAGCCTCTGATCAACACCAAAA GAACCAACTGCAGGCTGGTACACCCGGTCAACAGGCTAGTGGAGAATCAG TTCAATTGGGATTTCAAAAACCAAAGAGTGCAAGAAAGATTGCAAAAGAC ATGGAACGTTGGGCGAAGAAACTAAACACACAGACAGAAACAAAGAAGGC GGCCGTCAAACAAGCACAACAAGAATTACGCATGCTCGAACAGAAAGAAG AAGAGttaagaaagaaaattcaaattggAAGCTCGCTCACTGAAAGTCTG GCTACTGTTGCTAAAGCAAAGGATGGTATTCGATCGCTCTTCGTGCCAGA CAATGACGAAGAGGGTAGTGTCTTGAAGTTGGGATCAGCTCTCCAATCGA ACAACCAAAAACCTCgTTCCAGTCTTGTCGCCGATTACCCTGACGACGAC TTTGACAAtgataatgacgtcatcgatgaaaGTCAATTCGTTGATCTCTC CAAAATGGCATGTTTACTTTGTCAACGACAACTGACCAGTCAAGAGAATT TGACAAAACATTTAACAATGTCGCAATTACACAAGCAAAATTTAGAGAAA TATAAACGAAGTAAGAAGAACAAAAGGTAAATGATAGCCTCTGATCAACA CCAAAAGAACCAACTGCAGGCTGGTACACCCGGTCAACAGGCTAGTGGAG AATCAGTTCAATTGGGATTTCAAAAACCAAAGAGTGCAAGAAAGATTGCA AAAGACATGGAACGTTGGGCGAAGAAACTAAACACACAGACAGAAACAAA GAAGGCGGCCGTCAAACAAGCACAACAAGAATTACGCATGCTCGAACAGA AAGAAGAAGAGttaagaaagaaaattcaaattggAAGCTCGCTCACTGAA AGTCTGGCTACTGTTGCTAAAGCAAAGGATGGTATTCGATCGCTCTTCGT GCCAGACAATGACGAAGAGGGTAGTGTCTTGAAGTTGGGATCAGCTCTCC AATCGAACAACCAAAAACCTCgTTCCAGTCTTGTCGCCGATTACCCTGAC GACGACTTTGACAAtgataatgacgtcatcgatgaaaGTCAATTCGTTGA TCTCTCCAAAATGGCATGTTTACTTTGTCAACGACAACTGACCAGTCAAG AGAATTTGACAAAACATTTAACAATGTCGCAATTACACAAGCAAAATTTA GAGAAATATAAACGAAGTAAGAAGAACAAAAGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000086_pilon | genome | sc0000086_pilon:451466..459640 + |
|