MSTRG.11742.2.p1 (mRNA) -

Overview
NameMSTRG.11742.2.p1
Unique NameMSTRG.11742.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000086_pilon:444589..459640+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11742.2.p1 ID=MSTRG.11742.2.p1|Name=MSTRG.11742.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=15052bp|location=Sequence derived from alignment at sc0000086_pilon:444589..459640+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGACAACAATCGTGAGAGTGAATATCGACGTTCTCTTGCATCTTCATCC ACATCATCATCGCGTGACGATCGACATCATCGTGACGATCACTCACGCTC CGGTAATGTTGCAGGAACGACGTCATCAACATCGAAGTTTGATCTAATAC AACCCTCTCCCACAGTTATTATACAAAGTCTTCATTTAGAAGCACAAGAA AAAGATGTGagtgattttattttcattaaaccatatgtttttagcttttt gaCTAATATAAGTAAGTTTGtgtatctgtgtttttttttctgcacCGGAG ACTGTTAGtttctgatttgtctagatcctgattgactgaggacgacggta aatttACACTTTCACCGACCCaaattttgcgggtcaaaactgtggttttt ttccaaactgCTCCTGTAACTCAATCGCTCTCAAATTCACAAATACATAG ACTCGCTATAGATTTCTCCTAAAACCTCCGCTAGCCTTGAATATTTGTAA CAGTTTCAAATTGCCATTAATAGATGAGGGGATCCCCACGATGTCTTCCT AATTGATATCCTATGGGTATTCTGCCTATACTTAACTAAAGCAACCCACA GTTTTGACTCGCAGCGGTAAAAGTTCTGATTTACCGTCTGAAAACTAAca gtaccgagtttatgtatgtgtgtttttcagcgacggagacggtaaggttc taatttgagtagatcctgaccaactgaggacgacggtaaatcagcacttt taccgtcctcgattttgcggggcggaattgcgggtttttccaaatcgctt cagtcactctaccgtcctcaaaagtgcaaatacataaactcggtagttTC CATCGGAAACGGAAATAAGGAAAACAGCTGGacaaaattgaattaaatta cTTATCATTAAATCCATCTAAAATCTTTTGTAATATGTAACGTGATTCGA TTTATTTTGTTAGATCGAAGCTATTTTGAAAGAGGACGGATTTGTAGCAA GGAACGTATCTGTCATCCGTGAACGGAATTCGGAGAGTCGCGGTTTCGCT TTCGTTGATTTTGATAACGAAAATATGGCTAGGGACTGGATCATCAAGCG ACAGGTACacacttttatatttgaataattttttcgaCCTAGGGTTATCC TTATAATTAAGAATACTTTAGATTAACGAAAATCAAGCGAAACGATAACG AAAATCAAGCTTAGACTGGTCCCCTAAGCGGGAAATCCGTGTAAAATACT CCATAATTCAAATCgatctttattttgaagaaagtTCTTGAGCCCTTGAA GTTCAATTTAGAGTCGACTCTATTGCGAAACCTTGATTCCttcaagatcg aattagagagaacaAGTTTATTGCAAAACATTGATAACAACTCGTGTTAC TTATAAAGACACTAGAAAAGGTAATTATGTACATTTTTATTCTTTCTTCT CATAGCAAAAGCTGGTGATACTTGGTCAGAGATCAGTATTGAATTATAGT CGTAATAAAAAACAACAGCAACCAAATCAACAACAACCGACGCATGTTGC TGACTGGACTTGTAACAAGGTATCATTAACATTGAGAATGTATTCATGAC AGTCACTCTTATCTACGGCCGtttttttCGCCTTACAAtccaagggttgt gggttcgatcacCGGTTACCGCTAACTCAGCGATTgggtagcttagattg ggtaatctgatctaggcggtaagttactgggagctgagtagtagtaagtt tgcgaccgcagtcgagggcgacccggaagctcccttttcgtatagctgtc tacccgaaggtaggggagggcgccactcctttacctggatttctccactt acccttgatccgtctctttagttgctgagcatcaagcagagaggaatcaa gtaccattttgggaatctttggtatgacccggctgaggatcgaacccaca acctcgcGCACTTAGCTGGATGCTCTatcactgcactacggtcgcttaac gggagctgagagtaggtgtggcgatCTACCTCAGCATTCAACCTCCCAGG TCTAcggcaaatagaaaagggggatagactccctcgcTCCCAAATGAATA TATGCTCACTTTATCTACTAATGCACATGTTGGGTACTGTCAATAACAAA AGGGACTGCGAAACaacattaattttatttttaaagtcgTTCCATTCGGT CTTACAGAAGgctaaaataaacatttttgtcTCAAAGTTCagcaaaatta aatgaaaataaaaatcggGGCTAAGTTACCTGAAATTGCATAATTGTTGT TTTAGACAGCCTTTATAGTGGAAAAACACTAGGATTTTAAGTGCTCGTTT CGGTCACTAACGGACGCTAAACTGCATCATGGCTGGATTTTTCTTTCAGT GTAATGGGTTGAATTTCGGAAGCCGCCACAAATTTGGAGAACCGTTCGTT TGCTTCAAATGTAATACTATTCGTGATGGTAAGTGAGAGTGGCCCTGGGG TGCCAACACtttttttCACCCAAATAACTATCGAGAAAGTCAAAGAAAAT TATTCTGGAATTCACTTAATCATTGATTATAGAGTATTTTAGAGATCTTC CAGTCTCATAAAGGTTGATCTCCTATAAGCTTCAACTAAAAGAATTAACA ATAAATAACCTCCTTTGAATTAGAATCTTtccactcccccccccccttaa aataaagttttttaccactttgaattgaatttagAATCAGATGTACAAAG ACAAGACCAACATCAACAGAATAAAGATTCATCAGTTTGTGCTAACCCTT GTAATGGTAGGTCTTCTATAAATGCAATATcaggaaataaaaaattatca tattCAAACACCCTGTTATTTTTTAGTGCTTCCGTATTAAACATATATCA TGGATATCTTGAATTAACTGGAATTATGAAGAAGTTTTCAAGATCTGAGA GtgtttttgttatattatggtaacccttttttttcttccagtTTTTCTGA TACCATATAATATCACGAATTAACTGGAAtctatctttttttctttcagt tctCATGATACGCGGTATGGACTTCTCCACTGAAGAAGAGAAGGTATGCT TGAACGTCATGGAAATTAGACTATATTTGCGAATTACCGTTAATACCCGT TCCGTTTCGCTGCgtaacgaaatgaagccattctattggttaaaagtgac ttaaaattgaatttaaccGATAGATTGGCTATATTTTTAATCGGAACGAA ACGAAACCAAACCGTACGCTAAGGGCTCCCTAGGGGTCAAACATGTTGTA AGGTcctgttttttttgttgcttattttatgaaaaattcaactTTCATCA TCCTTCTTTATCCTCAGATACGAATGGAGGTTGTGAAACTGACATCAAAA GTGTTATAcgacgttcgattgattcgtgATAAGATCACCGACATGTCACG TGGGTTCGCATTCATCGAACTTGGAACGACTGaggtatttcttttttatt tcacctATATTCATTTTCTTTACCTATATTTAACACGAACGGGGCTTTCT ACTTTGTTCAAATATATAAAAACTAGAACGTAGATTTCCCAAAGAcgaaa actgaaaaattggccGTTGGCATCAAGGCAGATTTTAGGGTCAGTCGGGT AaaatagccaatcagattggTTTTATCCTACATAATAAAGTGATTTAGAT AATGTTTTCTGAAAGTTTCATCTTGATAGAGATTCACAGATGTTTTGAGT AAGAAAGACTCGACTAATCGAAATTCGAATCAGCTGTTCCTTTCATTAAG TTTTGTGACGGCAGTGAAGAGGGCGACCAGTTGAGGAGGGTGCCACTCAT TTCCTTGGATTTCCACCTTTAAACCGGTCTTGTTAGACGCCCAAAACAAA GCAGATCTAGTCATCAAGTACCGTGCTTAAATTTTTAGTATGATCAGACC TTTGATTGAACCCCATAATTCTATGCACTGTAGCTAAGTAAATTATTTAC CTTTGTATCACAGTGCTACGCTTGCTTGACACCCCGAGTCGGAGTCTTTT CCTCTTACCAGTAAATCACCCTTTCCTTTTTCCTCCTTCATAACAGGATG CACAAGAACTTATGGAAGTTATCGAACGTATGGACCCGCCCTTTGAAATT GACGGGCGTCGCATTACAGTGGGTTACGCCCGGAATGGATACAATGCTCC CCTCGGTGGCAAGAAAACGTAAGAGAATGTTTATTACAATAGACAATCTG GGAGAGCTCAGTCTTTCACCTGAAAATAACTGATTTCAGATTCTTTCTCT TCGGGGGAGGGGTTAACTGTCGAGTGGTTAAAAACATCCTAAAATGTGGT ATTACCTGCTTGAGTCAGAGGCTTTTTCAACATATCGAGAAAGAATGGGG AAATccttcgcgggtacttaatttcgcgattttttaggccaaatttcgcg aaatttaataccgtttaaatttttcaaaaatgtaaaatcgcgaaattaaa tacacgcgaaaatttttcgaaataggtcaaaaatcgaaaatacttatttg ttacacttagttactatttttgtcactagttttgttactatttttggtat gtttacacccaatacgttgtgtttcaagcgaaatcagtcattttcttgac tcattcccactttttgaaaatgcccaatttattgaatcgcgaaatttaat acacgcaaaAATTTCCAGAAACTGGCAATCGTGAAATTTATGTAGTACAC GCGAAAAATGTTtcctcgaaaaaatttcgcgattcgcgaaatttaataca cgcgaaatataataccaattAGGTATAcggaagattttgaaaatgagtaT CAACGTTTACGGAACAAATCTATCAACTTGCATTTCTTTCCCTTTTGTTG TAATATCTTGCTGTCTTCCTGTATAGGTCAACTGGCGTAGTATCAAAAGA GACGGCTGCACAAAACGCTCTTGCTCAAGCAACGGCTGCTAATCCCAACA GCACTCCTCTTGAGGTAATTTAGATTCCGCGATAATTGTTCAATTTATCT ATCAACTCAATGTCTCTATTCTTTATTGTTGTTGAATAAATATGTCCTTG TTTCTCCTAAATTGCTTGTTCAACTCAAACACCCGTTTTGGTAAAATTGT AACCAATTTCAACCTGGAAAATATTTGGTTTTGAGCCGAAAGCATTGATT GGGAAAATCGATTTCGTCTGCAGACACAGTTGAGAAAGATTAAAGTTTCA GTTAGAGGAATTTagaactacagttgacgctctcttattcgacattctac tattcgataggctcccttattcgatgaaatttaaagtccccgccaacaag aaactctcaaaaACGACGTTCACTAATTCGGtaagctcccttatttgatg aaaatccaattccccttgaagatggAATTAGacagcgtcaactgtatttt gaaGCTAAACCAGACAAAGTCTAAGTCTATTTCATGGCTAGTTTCACCAA AGCTCAGTTGCAAACGCTtagaaatgacaaaaaagaccaCGAGCACTATT TTAACCTCCGTTTATGCTGGCTTATCTGTGTCTCTATAAGCTACTACTTA ATCTCGATCTCTTTGTTTGTAAGCTCCGATCAGAGTAGAAATTTAGCTCT CAAAAATATTGTTCATACTTAGTGTAAAGGGCTAATTACACTATACAATA TATAGTCAGGCAATATtgtgatgatatattgctggagtgcaggcaatata ttgaaaaagtgTCTGCAATTTATTGTCAGCTagatttgcaattttccaac aatataggggaattgtttacggaaagaaaattcctttttcataATAGAGC ATGTGTTATTTAcatcgtacattacggtccgaaaacgatattgtcaaata ttgttcgtcaatatattgtgtagtctaagtagcccttaaaaaatagtttt tggaTGAAACGAGAAAAAAGGTATTTGGTATTATGTGTTGAATGTTCGTG CTCAAAGTGGCTTGGTTATTCACAGCAGAAAAAATACTGGCATATTGTTA GAAGGAACTGTCATGTGAGAATCTACTGGTTTCATACGGTAAGACAAAGA TAGAACGATACGGCAACGACCAGAACCTCATGTTTCCATTTTCTATGAGT CTCGTTGATTTTTCATTGACAAATTTTCTCGCACTTTTCTTCATACAGTA CTCTTCTCACAATGTGACTGGCGCCTTGCAAAATCCGTCATCGACAGGTA GGCTCGTGTAACCTGGGACTTAAATAATACGaaaaaaaTGACAGTTCAGG TATAGTATAACGAAAACAAAAGCTCATACATGAGTTTGTTGACTGGGAGA CATCAAAACTTGATTGTAGGACTTCTTAAAACGTCTGTTATCaccaaaat ttaataaaaaattatgaccTTACGTGTAATAATAGCTTTCCTTAACTAAA ATTTTATTGACATTAACGATCCCTAACTCGTTAAACCTgctgagcaaaaa aaaagatgCCAACCGGATCTGATTTTTTGAGGTTAATTCGTATCCCTCAT AACACAACAAAGCTGAGGGGGATACTGATATGCATTATATATATGCATCC CATCGCTTCAGAACAAAAAATCTTCTTAAGGGGAAAATTTACGAAGAAAT GACAAAGAAggggggggTCATAGAAACTTTCATTTAAATTCCATACGAGG TAGCAGAGCTACCTTCAACGAAAATGATAGTGTTTTGAGCTACCTttcca aaacaccatagaattTTCGTTGAAACACGAGTGGTGCTAGTCAAATTTAT GCACtagaaacattaaaaacaaacctttactcctttaaaaaaaaaataaa aaaaaattaataatacgCTGAGAACAATGATATTCATTTCCCGTGACCTT TGACCTTCATTCAACTTCATCGTAATTTGTTCAACATTtcaaaatcggaa aataaaccaaaacTCACTTTTTAACATTCTCTTCTTTTATTTATCTCATT ATAGGTCCAACGGATGGGTCCTCGGCCTCGACGACGGCGTTGGCGATCCA AGGCTTCACATACGATGCAGCATCTGGTTATTATTATGACTCGAACACTG GTCTATACTATGACTCGTCTACTGGGGTGAGCTACTTAAAAATTTCCGGA CGAAAGTTCAATTAAAGAAAACGCCTAAGAATATCTACTTACTCGAGGGT AACTAAAAGACTGGGGTGtggttgaaaaaaattcgaacttaaaggttttg gttttatataagagtgatattgtttgcttactcatcaattttaattcaca agctttttaacaCTAAATTGACACATATGTGGAGCAAGAGTTGTCCGAAT GAGGAAaggttttttgcttatatcagcataatataacagtAGACAGACAC TGGTCTTATATAAAATAtgtatctgatatgaaacgggaacacttatgtaa aaataaaacctttaaaaattagGGATAAAGGAATGAACACATCATTATCA AAATCGGCggattttttgaagatttacaGCAAAAGAAGATTAGGAACTTG aacaaacattttccaaaagaaatttttagcaGAGTGGTAGGCTTAGGGTT AGACAGGGCGGGATCTTTTTAGTTTGACGGAAGTAAGTTGTTACTGTTCA GTATCCTTTAACTTTTGCATTAGTTctatacttgaaaaaaaaaacggtaa TTCAAGGATAAATTATACTCAAAACCATAATTTTAAGAATGTTCTCCGTc gttctttttcaatttctcttattcgatgaaaatattTAGTTCCAGCTAAA TCTAGtttgaatcacagacctctacaaagcTGGCTGGTATCTATAAAAGA AGCACGATTTCGATCGTATTCTTTAGAGGGTGCAAGCAGTCTAGAGGAAA TCAAATCATAGAGAGagtctatttaaaaaaaaaaatttattacgtTTTAG TATTACTACAACAGCACTACAGAACAGTGGTTACAATGGGATGGTACTCA ATATCACGTGATCAATCAAGACGGGTATACCTACTCTCTTTTctctttca tattttcattaCTATTTTGTTGGCTGGAAAGTATTGTTTTGACTGTTCGG GGCACAAATTCCTGTTAATTTAGGAGGAATTGGTAtttttttCCCATATC TAAAGTAAGAATTTATAGTTATAAATTCTTACTTTAGATATGGGaaaaaa aTACCGATTCCAGATATTTCTCGAAAATAACATATCCAATTGAGAATATA CACCCCTGCAGTGTCTTCTTTCTATTTTTATAGCAGTTGTTTGGTTGCAA GTATCATATTGTGTCGACAAAAACAACAACTGAAAAGCACATTGCAGTGC CGCATATTATAAATTAACGGGTCCATTTTCAACTATCGTCTTAGTCCTAT CTTTTCGCCTTTTTATAGATCTCTGGCTGGTCAACCTTCACAAcagaaac aacaacaacagcacgCGATAAAACAACCTCCACCGCCCTCCACGCCTAAC CCTGCTGCTGCTCATCAAACACAGGTACTCATACTATTTACTCTCATAAC AAACCAAGATATTAGACTGCAGTCGTTTATAATACATGTTATACAGTAAT ATGAGTGTTATATGACAATACGGtgattgttacgggataatatcagaCTA CTGTTATTCAGATTCGGGATTTTTTGGGTATCTTATGTATTTCAAGATCG AAATTAAATTAGTCACTTTCATATCTTAAAACACATtagatgtaaaaata aaataacctAATTGTTATTCGCTGTTCGCTGTAAAAAGTGtgactttgaa aataatttatcacGTGAATGGCCAGAACATGGAAGAATCTTCCGAGGTTG TTTTATTTAGCGTGGATATTGACAGGTTTAAGGTGGAATTAATGCCTTTA TGTCCGAATACTAGACACTATAGTAGAACTTTGAGAAAATCATTACTTCC ACACTCAAAAAATCTCTTtcccctttaaaaaaaaaccttctttAAAAAGT TCGAAAGTTCAAATTTACATATCGATATGTTTTGGAAGAGACAAAATTAA AAGCAGATTTTcaggtatttttttttaaatttcattatatAGTTACTTGA ACCGTACGACTAGAACATAATCTACTTATTTTGTCTACCTtcagcaacaa caacagcagcattatacacaacaaaaccaatattcacaacaactccaacc acaacaGCTATCAAAGAGTATCAGCACACCCGCTCAAAATGCATTAATGA TAGCCTCTGATCAACACCAAAAGAACCAACTGCAGGCTGGTACACCCGGT CAACAGGCTAGTGGAGAATCAGGTAACCTTGGTGACCAAATCTAGTTCTC TGACTAGCTCTAATCTCTAGTGTGCGTCGCAAACATCTAAAGATTTACTT CCTATATAGGCATTTTTGGGAGAGAGGATAATATATCGAGTATTACGTAG tctttataagaaactcttttcgcttAGATGCTGAGTAGTAGCCTACCTAA TCTCCGACTAGATTTTGATTACTTAACGCGGGCGCGTATGCACTCTAAGA GCAATGTCCAggttgatctttttcatccaaatttgggatgaatattaGAT CAAACGAGCTGTTGAGCGCGGTGCTTGGCTAAGGCAAAACAATCACACCA AAATAAACTACGAATCATAAGCATAGAACatttaaaacattatttatttt GGCTGAATAACCATTTCAGATCATTATACTcgccatatccctttagagca tAGCGTGGTAAGCgttggatgatctgttatgagattaaaATTGCCCTGTT TCAGCTACTTGGTTGATTTAGGATGGATAGAGGGTCTGTGAAACGTGGAC GAAGAATAACTATTGTTGATGCTGCTAACCTTATTTCAACTCAAATTTCA TAATGTCGAGTTAAATTGCAAGCGATTTATATTACTCTTGTTTAAtactt ttctctcttttagTTCAATTGGGATTTCAAAAACCAAAGAGTGCAAGAAA GGTACTTTTTGTCAATATCCTTTTATTTCCGAATCGCAAAGACcagtaat ttttttccatctaTCAATCTACTGCCAAAACTTGATTGTAAGTCTAAAGA TTTTTGAGGATCTTtaggaattttttgaaatttaaggggAGGTAAAAAGG AAACTCTACCGTTCAAGCTCGAAAAATTTAGAATTATAGTCCTTAAATCC TCcttaaatatcaaaatttgaaataaattttactaATCGTAACGTTTGCT TTCATAATggcgaaaaaaatttctttatgaaaaataaaagtcGAAACAGA AGCAAATTTACTGGCTCTTACTGAGaaaaaaaCTTATACGACATTTTTTC TGAAAGGAAGTTGGTTTTTTAATAAAGAGGTTTTCCATGTTTTGacaagt tacgtaatttccaccattatgaaAGTGAACGTTCGAtttggggacaagct ggagtttttacaagctcttatttgatttggttggtcgttaagatgtaata aaagaatcttattactttttctaaagaacgcgtcatctttatcactttaa atgaccaattagtgaagtatcttgtaaaaactccaaggcatctctcGATT CGCGTTAGGGATTACCTCTACAGATTCGATCCGTTAATCTTCTTTACCTT ATACAGATTGCAAAAGACATGGAACGTTGGGCGAAGAAACTAAACACACA GACAGAAACAAAGAAGGCGGCCGTCAAACAAGCACAACAAGAATTACGCA TGCTCGAACAGAAAGAAGAAGAGttaagaaagaaaattcaaattggAAGC TCGCTCACTGAAAGTCTGGCTACTGTTGCTAAAGCAAAGGTAcataagtt ttaaaaaatgtctcgaAACTCGTTCTCATCAATATTAAACCAGCAGACTT TGTTGGCCGTTCGCTGGATATGAATTTCATGGAAGCTTAgtttataaata ttttgaaactgTCATGACGGGTAGAAAACGACAGAAAATATGAACTTTTG GTTTGATCAATTTTGAGgaatagtccgggagccaaatcctatatctcctt aaataagcacttttgcttaacccaagattctacaggataaactatacatt tttggaatcctaactatcctagtttaagaaatggtcggTCGCCAACCCTA ATTACTggtcaatttttggacctaccttaaggtagtgtcctataaattaa cccgtgttcgttagttagttcgttagtacgttagttaccaacttttctcg agattggctcattcaatttttctgattttttgcacaaaggtgcattacta taaaccctcgaatgtgacggagcccgattttcgaaaaaaaattttttccg gccggtagaaccggaaatgtcccgaaaaaagcggttttttgagattttct cgagattttatcattagttttttgcgattttttgcacatagatgcacatt agtactgccgaaaaggtgtcgaaaaccgtttgccgaaaaaaaaaattttc cggtctgtagaaccggaaatgtgccgaaaatcgtcgttttttcacatttc cgtcacattttttcaacttatttaattgtttctttacagaaaaatgttct ttatgatgatgcccaaaacttagcatcgtttgatttccaaaaaaatcatc ctttgaatccggaactccttaaaaatcgccggaacagccgaaaaccggcg taaaacggttttccttcattttttcaacttatactcgacagttTGTTTTT GACTACCCCCTCCCCCATTCTCCACCCCGACACTCCTCAATCTgtgatga aataatgaaaactgaaaattaaatgttttttttacttcagttttaatttt ctctgaatgattgattaaagtgtcgatattatttttctttcaccattaaa catcgatgcgtttcttaattgctttctccgttccaatagatatataaatc gaaatttaaaattatacattacttccattaaattctaattattcgtttta taaataggtaggtccattaaagtattacttgttcatactgggcccgagtt taggggggtaCTTTTAACCCTtcgtaaggatttgttaaggaaaatatctt tccatgtatgatataatgtgctatatctcatgaatgaattgaccaattgc tttgaaactttgccaaaagCTTCAAGATAGATTGGTGATCATCATTTGCA AAAagctttgtgaaaaattatttttggaggTTTCCCTGGGggaaaaatag ggaaaatttgggtattttcgctgaattttgacactttataagactgggac ctaccaaaacaacttttaatgaggcacaaactttgtgttatgataaaatt tgatgcgaTACACCAGAAAATTATTTGTCAACTGTATATACTATCATTTT CGAcgcttcagggggtaaaaatacccattttattgaatttttacataatt tgagcaattttcactgtttatctcgcctaaaatatcttcgaaaatagttt taacttgatctttGTGTATTATACACTAGAAATTTACAATGctgacttga aactttcacatACAGGGTGCAGTTTGagaaaccagggggtaaaattgcca aGTTTTGGGCCCATTTGACCCATAGAACAGTGTTAAGCTGTGCAAAGTTT GATTTCTAGCTGCTGGAAACATGGATATTTTTGGTAGGCAATAGATctat cttgaaacttttggcaaagtttcaaagcaattggtcaattcattcatgag atatagcacatatcatacatggaaagatattttccttaactaatccttac aaagggtaaaaagtaccccctaaactcgggcccagtatgaaaaattgacc aggaatTAGCTTTGGGGACCATTTCCAacactaggatagttgaggattct Aaaaatgtatagtttatcctgtagaatcttgggttaagcaaaatgctatt tttcaggtttggctcccggactagaAGTCAATAGCAGAAAACCAGTGGTT TTTGGTTCGCATCTTGGTCCTACCAAATTCTGCTCAAATCAAAgattaag ggaacttattttagcGAGCaacaaaatcctgaaaaattttggcgagaact tattttgacgaATGACAGGCTAAATCTGtcctattttgccttattttgat caattttgatgaattataTGAATTATTCTGTCAAAATGCAAGGAAAATTC ATTTTGGCGACAACTTATTTTGACGACTGAGTaaagtatttaattttggc gagaacttattttggggaaatttgtCTAAGCAcaccaaattcgccaaaat aagttcacTCAATGTAGCTGAGCCGGAGTGCTCAGGTTGGTGGACCACTT TTATTCAGATTTGGAATGAATATTCAATGAGATTTTGAGCTCGGTGATAG GCTAGAACAAAACAATTGCACGAAAGTTAAACGTCTATCGCAAACATTAG AACCCGGTCGcagtcactttcgtttttagaGCAACGTGGCTTTGAATGTT TTGGTTGAACAATCGGGCCAGAGGTGTGCACAGAATAAATGATCTGTTAT AAGATTAGTAAAATGTTGACAATACTAACATACAGTTTTTTAATGAGAAC GCCGAGACATTTTCtggattttaaaaatattcttgcCTCTGAAGCCTTTG GTTCTCATTTACTTTGTTTTTATGGAAACAACTTTTTTGATCAAGATATG CTGTAGTAATACTCTAAACTTTCCGATACTTTATCGTTAGGATGGTATTC GATCGCTCTTCGTGCCAGACAATGACGAAGAGGGTAGTGTCTTGAAGTTG GGATCAGCTCTCCAATCGAACAACCAAAAACCTCGTAAGTATCGAtgact ttattttatttatcgttcgttcgttcgttcgttcgttcgttcgttcgttc gttcgttcttccattaattcgttcattcttccattaattcgttcgttctt ccattaattcgttcattcttccattaattcgttcattcttccatcaattc gttcattcttccgtcaattcgttcattcttccgtcaattcgttcattcat tcattttaggTTCCAGTCTTGTCGCCGATTACCCTGACGACGACTTTGAC AAtgataatgacgtcatcgatgaaaGTCAATTCGTTGATCTCTCCAAAAT GGCATGTTTACTTTGTCAACGACAACTGACCAGTCAAGAGAATTTGACAA AACATTTAACAATGTCGCAATTACACAAGGTAATTAACCTGTAAACAAAT TACCGGCAAAGAACTTTTTTGCATCAAGGTGAAACCCCATAGCTAAATTC AAGTGACGAGTATCGAATTTATACTTTCTTCTCCGACCACCCAAGATCCT TGAATGACTATTAACTTTTCTGTTTCTGTTTGTCGATATAACTACCTTAT ATTTTCTGtcaatttaacaaaaatattttggtaacaaggaaTttttgaaa aacttttgcctgatattttttttcgttttttatcttCAGCAAAATTTAGA GAAATATAAACGAAGTAAGAAGAACAAAAGGTAACGAAACGTTAAATGGC TGATTGTGAATACGCATGCGTAGAATTGTGCAAATTTCTTCGGTGATGGC AAATAGACAAAAGGGAGAAAGGTCACTTGGTTGTGACAAATGGCTATCGA CAGCCTTACAGACAATTCTAAACCAATTGTGAATTTATTTTTACAATTGA GCTTCTGATTGTTGTAATTCTATAAAGACTTGAGCGCGCTGTGGACAATG TCGGATAAATACACACACAATAACGGACGAACACTTTCACGGCAACGGAC ATTTAAGTATTGTGTGACTTTTGAATGGATATTAGTCCTAGCCGTTGTTA TTATTCTGCATTACCTAGGGTTTTTTTAAtatatataaatgaatatatca ttttatttgataaaaattatatattgaAGGAAGACcatttcattcatcat tcattcattctatctatgccccccccccagcggtttgcgtgaatgcgtga atgggcttttttggttgcgtgaatgcgtgaaaattgaaaaaaaattgcgt ga

Coding sequence (CDS) from alignment at sc0000086_pilon:444589..459640+

>MSTRG.11742.2.p1 ID=MSTRG.11742.2.p1|Name=MSTRG.11742.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3636bp|location=Sequence derived from alignment at sc0000086_pilon:444589..459640+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAGCCTCTGATCAACACCAAAAGAACCAACTGCAGGCTGGTACACC
CGGTCAACAGGCTAGTGGAGAATCAGTTCAATTGGGATTTCAAAAACCAA
AGAGTGCAAGAAAGATTGCAAAAGACATGGAACGTTGGGCGAAGAAACTA
AACACACAGACAGAAACAAAGAAGGCGGCCGTCAAACAAGCACAACAAGA
ATTACGCATGCTCGAACAGAAAGAAGAAGAGttaagaaagaaaattcaaa
ttggAAGCTCGCTCACTGAAAGTCTGGCTACTGTTGCTAAAGCAAAGGAT
GGTATTCGATCGCTCTTCGTGCCAGACAATGACGAAGAGGGTAGTGTCTT
GAAGTTGGGATCAGCTCTCCAATCGAACAACCAAAAACCTCgTTCCAGTC
TTGTCGCCGATTACCCTGACGACGACTTTGACAAtgataatgacgtcatc
gatgaaaGTCAATTCGTTGATCTCTCCAAAATGGCATGTTTACTTTGTCA
ACGACAACTGACCAGTCAAGAGAATTTGACAAAACATTTAACAATGTCGC
AATTACACAAGCAAAATTTAGAGAAATATAAACGAAGTAAGAAGAACAAA
AGGTAAATGATAGCCTCTGATCAACACCAAAAGAACCAACTGCAGGCTGG
TACACCCGGTCAACAGGCTAGTGGAGAATCAGTTCAATTGGGATTTCAAA
AACCAAAGAGTGCAAGAAAGATTGCAAAAGACATGGAACGTTGGGCGAAG
AAACTAAACACACAGACAGAAACAAAGAAGGCGGCCGTCAAACAAGCACA
ACAAGAATTACGCATGCTCGAACAGAAAGAAGAAGAGttaagaaagaaaa
ttcaaattggAAGCTCGCTCACTGAAAGTCTGGCTACTGTTGCTAAAGCA
AAGGATGGTATTCGATCGCTCTTCGTGCCAGACAATGACGAAGAGGGTAG
TGTCTTGAAGTTGGGATCAGCTCTCCAATCGAACAACCAAAAACCTCgTT
CCAGTCTTGTCGCCGATTACCCTGACGACGACTTTGACAAtgataatgac
gtcatcgatgaaaGTCAATTCGTTGATCTCTCCAAAATGGCATGTTTACT
TTGTCAACGACAACTGACCAGTCAAGAGAATTTGACAAAACATTTAACAA
TGTCGCAATTACACAAGCAAAATTTAGAGAAATATAAACGAAGTAAGAAG
AACAAAAGGTAAATGATAGCCTCTGATCAACACCAAAAGAACCAACTGCA
GGCTGGTACACCCGGTCAACAGGCTAGTGGAGAATCAGTTCAATTGGGAT
TTCAAAAACCAAAGAGTGCAAGAAAGATTGCAAAAGACATGGAACGTTGG
GCGAAGAAACTAAACACACAGACAGAAACAAAGAAGGCGGCCGTCAAACA
AGCACAACAAGAATTACGCATGCTCGAACAGAAAGAAGAAGAGttaagaa
agaaaattcaaattggAAGCTCGCTCACTGAAAGTCTGGCTACTGTTGCT
AAAGCAAAGGATGGTATTCGATCGCTCTTCGTGCCAGACAATGACGAAGA
GGGTAGTGTCTTGAAGTTGGGATCAGCTCTCCAATCGAACAACCAAAAAC
CTCgTTCCAGTCTTGTCGCCGATTACCCTGACGACGACTTTGACAAtgat
aatgacgtcatcgatgaaaGTCAATTCGTTGATCTCTCCAAAATGGCATG
TTTACTTTGTCAACGACAACTGACCAGTCAAGAGAATTTGACAAAACATT
TAACAATGTCGCAATTACACAAGCAAAATTTAGAGAAATATAAACGAAGT
AAGAAGAACAAAAGGTAAATGATAGCCTCTGATCAACACCAAAAGAACCA
ACTGCAGGCTGGTACACCCGGTCAACAGGCTAGTGGAGAATCAGTTCAAT
TGGGATTTCAAAAACCAAAGAGTGCAAGAAAGATTGCAAAAGACATGGAA
CGTTGGGCGAAGAAACTAAACACACAGACAGAAACAAAGAAGGCGGCCGT
CAAACAAGCACAACAAGAATTACGCATGCTCGAACAGAAAGAAGAAGAGt
taagaaagaaaattcaaattggAAGCTCGCTCACTGAAAGTCTGGCTACT
GTTGCTAAAGCAAAGGATGGTATTCGATCGCTCTTCGTGCCAGACAATGA
CGAAGAGGGTAGTGTCTTGAAGTTGGGATCAGCTCTCCAATCGAACAACC
AAAAACCTCgTTCCAGTCTTGTCGCCGATTACCCTGACGACGACTTTGAC
AAtgataatgacgtcatcgatgaaaGTCAATTCGTTGATCTCTCCAAAAT
GGCATGTTTACTTTGTCAACGACAACTGACCAGTCAAGAGAATTTGACAA
AACATTTAACAATGTCGCAATTACACAAGCAAAATTTAGAGAAATATAAA
CGAAGTAAGAAGAACAAAAGGTAAATGATAGCCTCTGATCAACACCAAAA
GAACCAACTGCAGGCTGGTACACCCGGTCAACAGGCTAGTGGAGAATCAG
TTCAATTGGGATTTCAAAAACCAAAGAGTGCAAGAAAGATTGCAAAAGAC
ATGGAACGTTGGGCGAAGAAACTAAACACACAGACAGAAACAAAGAAGGC
GGCCGTCAAACAAGCACAACAAGAATTACGCATGCTCGAACAGAAAGAAG
AAGAGttaagaaagaaaattcaaattggAAGCTCGCTCACTGAAAGTCTG
GCTACTGTTGCTAAAGCAAAGGATGGTATTCGATCGCTCTTCGTGCCAGA
CAATGACGAAGAGGGTAGTGTCTTGAAGTTGGGATCAGCTCTCCAATCGA
ACAACCAAAAACCTCgTTCCAGTCTTGTCGCCGATTACCCTGACGACGAC
TTTGACAAtgataatgacgtcatcgatgaaaGTCAATTCGTTGATCTCTC
CAAAATGGCATGTTTACTTTGTCAACGACAACTGACCAGTCAAGAGAATT
TGACAAAACATTTAACAATGTCGCAATTACACAAGCAAAATTTAGAGAAA
TATAAACGAAGTAAGAAGAACAAAAGGTAAATGATAGCCTCTGATCAACA
CCAAAAGAACCAACTGCAGGCTGGTACACCCGGTCAACAGGCTAGTGGAG
AATCAGTTCAATTGGGATTTCAAAAACCAAAGAGTGCAAGAAAGATTGCA
AAAGACATGGAACGTTGGGCGAAGAAACTAAACACACAGACAGAAACAAA
GAAGGCGGCCGTCAAACAAGCACAACAAGAATTACGCATGCTCGAACAGA
AAGAAGAAGAGttaagaaagaaaattcaaattggAAGCTCGCTCACTGAA
AGTCTGGCTACTGTTGCTAAAGCAAAGGATGGTATTCGATCGCTCTTCGT
GCCAGACAATGACGAAGAGGGTAGTGTCTTGAAGTTGGGATCAGCTCTCC
AATCGAACAACCAAAAACCTCgTTCCAGTCTTGTCGCCGATTACCCTGAC
GACGACTTTGACAAtgataatgacgtcatcgatgaaaGTCAATTCGTTGA
TCTCTCCAAAATGGCATGTTTACTTTGTCAACGACAACTGACCAGTCAAG
AGAATTTGACAAAACATTTAACAATGTCGCAATTACACAAGCAAAATTTA
GAGAAATATAAACGAAGTAAGAAGAACAAAAGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11742MSTRG.11742Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11742.2.p1MSTRG.11742.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11742.2.p1.exon1MSTRG.11742.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon2MSTRG.11742.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon3MSTRG.11742.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon4MSTRG.11742.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon5MSTRG.11742.2.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon6MSTRG.11742.2.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon7MSTRG.11742.2.p1.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon8MSTRG.11742.2.p1.exon8Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon9MSTRG.11742.2.p1.exon9Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon10MSTRG.11742.2.p1.exon10Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon11MSTRG.11742.2.p1.exon11Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon12MSTRG.11742.2.p1.exon12Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon13MSTRG.11742.2.p1.exon13Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon14MSTRG.11742.2.p1.exon14Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon15MSTRG.11742.2.p1.exon15Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11742.2.p1.exon16MSTRG.11742.2.p1.exon16Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086_pilongenomesc0000086_pilon:444589..459640 +