MSTRG.11733.1.p1 (mRNA) -

Overview
NameMSTRG.11733.1.p1
Unique NameMSTRG.11733.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000086_pilon:330684..332040+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11733.1.p1 ID=MSTRG.11733.1.p1|Name=MSTRG.11733.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1357bp|location=Sequence derived from alignment at sc0000086_pilon:330684..332040+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAGTACCTGGTACTAATTTCTTTGAGATTCAAAATTAGATGCCACCATC
CGGGTCAGATGGGTCAGTACCCTGCAGCTTTACCCCCTGAACACACACAA
TACACAATACAGTACATTTAATTGTTATGATTCGCATGCAAAGAAATTCT
GTGCGATTAGGGTTTCTCTGGCTTGCAAACCAATTATAAAGAATTGTTTT
GTTTGAGAGAAATCATTAATCAGGTGTTTAAACCATGCTGCTATAGGCTT
CAAAGTCTTCCTTTAGTATAAATTGTGAAAATGTATTCTTACATTTCTTA
GTGGTTAAACTTTGTGATTATTTTATTATAGTTTAAAgatttcaatttaa
aatttaactTAGAAGAGAAAATGGCTCAAATAAGCACTGACAAAGATAAT
GGACAATATCTTAATCGAATTGGGAAATTGGTAACAGAAGTAGCTAAAGA
GTCTGTTCAAAATCATGGTTATTTTTCTATTGCATTTTCTGGAGGTAGTG
CTGCAACTAAGATTTGTGcagcttttcaaaaagatgaGTATTCTCAAGCa
actgatttttcaaaatggaaaatctttttttctgatgaaCGCTATGTTGA
GCTAGAGCATCCAGATAGCAATTACAAAGCAATCAAGGATGGATTGATTG
ACAAACAAAGCGCTATCAAAGCTGAGAATGTTTTTACGTTGACCAAAACT
GATGATCTAACAAAAGACGCTGCAAATTATGAAACACAAATGAAATCAGT
GTTTACCGGTCAAGAATTCCctaaatttgatttgattgttttggGGATGG
GTCCTGATGGTCACATTTGTTCACTTTTTCCCAACCATACACTTCTTGAG
GAACAAACAAAATGGATTGGTTATCTCCaagattcaccaaaaccaccatC
AGAGAGAATCACTTTCACAATGAATGTTGTCAACAATGCTGCAAATGTTG
TTTTCATTGCAACTGGTGaagcaaaagctgaaaatgtACGTAGGGCTGTT
AAAGAAGAGCCAACTAAAGAGATCCCAGCATCTTTggttaagcctaaaaa
aggaaCTTTATATTGGTTCCTGGATGCAGGTTCTTCCagtaaattataaa
aaagttgtGAAAGGTAGAAATGCACAAAGGGATGCacatatttttgtatt
tttgtagtattgacttttacagcattttaatattattagggtatttttta
ATAACATAATTTGAATAGAAAAATTGATAGCACAAAAATAGATttctaaa
atgataaataatcTTGATACAGTGTATCCGGTCAAATGAATTGCATTAAT
GACTTTGCTCTGTAATTGTTTTTCTCAGCTAATTAGTTATTACTTAATAG
AGTAATT

Coding sequence (CDS) from alignment at sc0000086_pilon:330684..332040+

>MSTRG.11733.1.p1 ID=MSTRG.11733.1.p1|Name=MSTRG.11733.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=729bp|location=Sequence derived from alignment at sc0000086_pilon:330684..332040+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCAAATAAGCACTGACAAAGATAATGGACAATATCTTAATCGAAT
TGGGAAATTGGTAACAGAAGTAGCTAAAGAGTCTGTTCAAAATCATGGTT
ATTTTTCTATTGCATTTTCTGGAGGTAGTGCTGCAACTAAGATTTGTGca
gcttttcaaaaagatgaGTATTCTCAAGCaactgatttttcaaaatggaa
aatctttttttctgatgaaCGCTATGTTGAGCTAGAGCATCCAGATAGCA
ATTACAAAGCAATCAAGGATGGATTGATTGACAAACAAAGCGCTATCAAA
GCTGAGAATGTTTTTACGTTGACCAAAACTGATGATCTAACAAAAGACGC
TGCAAATTATGAAACACAAATGAAATCAGTGTTTACCGGTCAAGAATTCC
ctaaatttgatttgattgttttggGGATGGGTCCTGATGGTCACATTTGT
TCACTTTTTCCCAACCATACACTTCTTGAGGAACAAACAAAATGGATTGG
TTATCTCCaagattcaccaaaaccaccatCAGAGAGAATCACTTTCACAA
TGAATGTTGTCAACAATGCTGCAAATGTTGTTTTCATTGCAACTGGTGaa
gcaaaagctgaaaatgtACGTAGGGCTGTTAAAGAAGAGCCAACTAAAGA
GATCCCAGCATCTTTggttaagcctaaaaaaggaaCTTTATATTGGTTCC
TGGATGCAGGTTCTTCCagtaaattataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11733MSTRG.11733Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11733.1.p1.exon1MSTRG.11733.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11733.1.p1MSTRG.11733.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086_pilongenomesc0000086_pilon:330684..332040 +