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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:304993..308966- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11732.1.p1 ID=MSTRG.11732.1.p1|Name=MSTRG.11732.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3974bp|location=Sequence derived from alignment at sc0000086_pilon:304993..308966- (Clytia hemisphaerica_ch_hm2_pilon)
AAGAATTATAGGCAATTCTGCTAACGGCATAATTGCTGAAAGAAATCGGC
TGTTTCGAAGAAACAACAATAATGACACTCCAAAATCAAAGAAAATAAAG
CTCATTGCTAAAAAAGGACACCACAACTATGGCTCGAGGAACAGAAAAAT
GCAAACTCCATGAAAACGGCCAAGTTATCACAGCCTTTTAAATAGAAGGT
TATCTCTCAGAGGAACAACTATATGAAAGGCTGGAAGAGTGTTTTTCCTC
AGTTTTAGATTTCTCACATCCGGTTCCCAGGTATTATCTTCATCCATACA
TCATTTTATTATATATTTCAACAAAATGTAAACAATCGAATTTTGATTTT
TAGCACCTGTCTACCACATAATATAGGCCTGCAGCCAAGGTAGTGAAATG
TGTTGTTTCGTAGGGCACCCCCCTATCAGGGCAAATTTTTGACCATTTGC
TCCTAATAGGGGCCTATTTGTTTCCCTTGCTATAAATGCTGTAGATGATA
GCTGCTAAAAGTGCTATGAAATCCCATGAAAACTTTGAAAATGATAGCAA
ATGATTTTAGATGCAATTTTTACTGTGAAGAAATTGCAAACTTTGCTTTG
CTTGCAGAAGGTTGATGTTTTTACTATTTTTGCTGATGGGGAGTTTGCAA
GTTTATTTACAAAAAATGCTAAAGTTTTGGACAGAAAACAATTATTTGAG
TGCACTTGTAGTAAATATAGCAAAAATAGTGATGAAACAAATAGGCCCTA
GTATGTAAAATTGGAAAATAAAAATTTGCCTCGCAAACTTTTAAACTCGC
AGTTTTCGAGTAAATCGGTTTTTATTTACTTGAGATATTTGAATTTAAAT
ATCATCGAATCGAGTTTTTTTTGCGGAGTTTATAGCAGTTTTGATGTACG
TTAAAAGTGGAACATCTCTAAATCTAGACATCGAAACCCAGCAAACCATA
CCGTTTTTGGATACTACTAAGTGAGAGCTATTCAACTGTGAGAATGAATT
TTCTGGAAAATGATCTCAGAAAGTTTCTGACATCATGGGAAAAAGCAAAA
ATCGTCAATTTTTGGCTATTTGTCGGCACCATGAAACCTAACAAATGAAT
AACGAAAAAAATTTTTTATTATTGTTATATATAATAAAAATCGATTTACT
CGAAAACTGCCGGAAATTTGTAAGGTAAATTTTTATTTTCAATTCTACAT
ACTATTAGGAGCAAAATAAGGGGTGCCCTACAAAAACCTATTTTAAGGCT
TTTTCGAATTTCAGACGCTGGTCTAATAGTTGTTTAAAATCGAATTTGAT
ATTTCAATTTAGTGCACTTCTTTATTTCAGTGGAATTTGTACACAAAAGC
AATATAATGAATTATAGAATAATAATATAACTCTGTTGCTTGCTTAAATA
AACTTTGTTGTTGTTTTTGCATTCAATTTCATACATTTCTTGTGAAATCC
ACAATTTAGGTTCGAGTATGTCAAGTACATCAGTGGCCAGCTTGTATCAC
CAACATTGGGGCAAAATGTGTCTTTCGATAGCACAACAGTTCTTTCAATT
AGCCGTCAGGGTGACATTTATCTCCGAGCAACACATAATCTTGTAAGTTT
TTTTTAATAGTATAACGAAAGTGGTTGTAAACCCTAACATTTTAACATTC
CAATTGGAATGACATAGGAAAACATGATATGTATGATTTCTGAGAAAGAT
TCAATTCAATTTTCAGACTACGGGCTACGGCTGTTAAAGATTTTTAAGAT
TCTAGCCTACAAGTTTTGTATTTTCAAGGAAAATAACACATGGTTTTTAT
ACTAAGTTACCAAAAATTATGCCAAAGATACCTAAATTTAGCTTGTACAG
TAAATGCCAACTTCAGGCTTTTTATGCATCCATCCATCAGGTTGATTAAG
TAGTGTTATGTATTTTTTTGGCAATTTTCAGGGCTGAACCCTTTAGCAAC
TTGGTTGCTTATAAAAACTGATTCACATTTTAAGTCAGACCATGACTGAC
ATTTCTTTTTTTTTTTAGAAAAACATCGAAGTGATGGGTGATGATAGTGA
TGATAATTTGGAAGTAAATTTTGCCTTGTTTTTTTAACTTTTAATGAATC
TCGGTCGTCTTTTTAAAAAAAAGAGTAAAACACAGAAAAAAGAAAATTTT
GTTCACTGTTTTTTTTAGTTAGCTGAAGTGAAATTCCTTTAACTATTAAC
TACTTTTTGAAATTTATCTATCGCTCGCAATACACTTGTACCTTTAGGGA
ACTAATTTTCGCGGGAACTAATTTTGTCTAAAAATTTCAAATATCTCTCT
AGGAAAATGAAAGAATTTGAGCAAAAAGTGGGTGTCAAGCACAAATATTA
GTTCCAAGAAATACAAATATTTCAGACCAACCCTCTAAGCGTGAAAATTA
GTTCACACAAAAATTAGTTCCCTTAACTCCTAACAATGTGACATATAAAA
AATGAAAAATATTTGTTTTATGCAGAATGCTGAACAAAACACGCCAATCA
ACAATCAACAATCAAGAATATTTCGGAATGGCAGCCAAATACGACAGCCA
GGTTCTTCTACAAGAACACTGCCAGAACATTCAGGTTCCCCCACAAGACC
ACTACCAGAACAGCCAGGTTCCTCCACAAGACCACTACCAGAACAGCTAG
GTTCCTCCACAAGACCACTACCAGAACAGCCAGGTTCCTCCACAAGACCA
CTACCAGAACAGCCAGGTTCCTCCACAAGACCACTACCAGAACAGCCAGG
TTCCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCCACAAGACCAC
TGCCAGAACAGCCAGGTTCCTCCACAAGACCACTGCCAGAACAGCCAGGT
TCCTCTACAAGACCACTGCCAGAACAGCCAGGTTCCTCTACAAGACCACT
ACCAGAACAGCCAGGTTCCTCCACAAGACCACTACCAGAACAGCCAGGTT
CCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCTACAAGACCACTG
CCAGAACAGCCACAGTCCTCCTCCCATCCACAACAGCCTTCACAGGAAAT
CAATTCTTCTACAACTACAGGTGCTACAGCTGATAATCGGCAAAATCTAA
GGGACTTATTCCCGAACTTAACTGACTGGCAAATTTGTGAAATACTTGAA
TCTTATTCAGATATGGAAGAAGCAGCAAGTTTTGCTGCAGAGATTTCGGA
AAAAAACGAGAAAGGAGCAACAATGGAATCTTTAGAAGACGTTTTTTCGT
ATTTTGAAAAGAAATTGCATCCATCGAGGCAAACACTTAGAGTTGAAGAA
AAACATATTTTCTCAGATGTTTTGGCATTCTATAAAGGTAGAGATTTTGA
TCCAACAAAGAAACTTCGTGTCATTATAGAAAACGGGCCTGGCATCGACG
CTGGAGGTTTAACAAGACATATGTTCGACGTTGTATTTCAAATGTTACGT
AAATCCGATGGAGAGAACAGATATTTTGAAGGAGAGAGATTTTCTCTACT
CCCTATTTGTTCCTCAAGAACCGCCCTTTCAGAAATTTTCATAGAGTCCT
GAAAATATGTTACGAAACATATCTTGTTCCAGTGTTAACCTAGCACACGG
ACCAATATTATCAAACGTCATACATCGAATGAACAATAATGAATTGAAAG
GATTGCTAAAGTACTCAACTGGGTCAGATAATCTGAATGTATTAAAGGAT
CAGAATCTCTTTGTCAATGTCAAAGCAGAATATACTGGAGTATTTTCGTC
AACTTGCTTACTTGAATTGACTGTTGCTGAATCACTATTTGAAGATGAGG
ATATGTTATTGAATGCACTCAAAGCAGTCATTGTCCCAGGACACCAAAGC
TTCAATACAGCTTAATTCTTGACTATTTTATCATTTTTAAACAGACTCTT
TTGACTTTTTAAAGCTATCTTTTATAGTTTTATGTTTTAAAGACCATACG
TCGCTGTAAAATAAGAGTGCCTCA Coding sequence (CDS) from alignment at sc0000086_pilon:304993..308966- >MSTRG.11732.1.p1 ID=MSTRG.11732.1.p1|Name=MSTRG.11732.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000086_pilon:304993..308966- (Clytia hemisphaerica_ch_hm2_pilon)
AATGCTGAACAAAACACGCCAATCAACAATCAACAATCAAGAATATTTCG
GAATGGCAGCCAAATACGACAGCCAGGTTCTTCTACAAGAACACTGCCAG
AACATTCAGGTTCCCCCACAAGACCACTACCAGAACAGCCAGGTTCCTCC
ACAAGACCACTACCAGAACAGCTAGGTTCCTCCACAAGACCACTACCAGA
ACAGCCAGGTTCCTCCACAAGACCACTACCAGAACAGCCAGGTTCCTCCA
CAAGACCACTACCAGAACAGCCAGGTTCCTCCACAAGACCACTGCCAGAA
CAGCCAGGTTCCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCCAC
AAGACCACTGCCAGAACAGCCAGGTTCCTCTACAAGACCACTGCCAGAAC
AGCCAGGTTCCTCTACAAGACCACTACCAGAACAGCCAGGTTCCTCCACA
AGACCACTACCAGAACAGCCAGGTTCCTCCACAAGACCACTGCCAGAACA
GCCAGGTTCCTCTACAAGACCACTGCCAGAACAGCCACAGTCCTCCTCCC
ATCCACAACAGCCTTCACAGGAAATCAATTCTTCTACAACTACAGGTGCT
ACAGCTGATAATCGGCAAAATCTAAGGGACTTATTCCCGAACTTAACTGA
CTGGCAAATTTGTGAAATACTTGAATCTTATTCAGATATGGAAGAAGCAG
CAAGTTTTGCTGCAGAGATTTCGGAAAAAAACGAGAAAGGAGCAACAATG
GAATCTTTAGAAGACGTTTTTTCGTATTTTGAAAAGAAATTGCATCCATC
GAGGCAAACACTTAGAGTTGAAGAAAAACATATTTTCTCAGATGTTTTGG
CATTCTATAAAGGTAGAGATTTTGATCCAACAAAGAAACTTCGTGTCATT
ATAGAAAACGGGCCTGGCATCGACGCTGGAGGTTTAACAAGACATATGTT
CGACGTTGTATTTCAAATGTTACGTAAATCCGATGGAGAGAACAGATATT
TTGAAGGAGAGAGATTTTCTCTACTCCCTATTTGTTCCTCAAGAACCGCC
CTTTCAGAAATTTTCATAGAGTCCTGAATGGGTGATGATAGTGATGATAA
TTTGGAAAATGCTGAACAAAACACGCCAATCAACAATCAACAATCAAGAA
TATTTCGGAATGGCAGCCAAATACGACAGCCAGGTTCTTCTACAAGAACA
CTGCCAGAACATTCAGGTTCCCCCACAAGACCACTACCAGAACAGCCAGG
TTCCTCCACAAGACCACTACCAGAACAGCTAGGTTCCTCCACAAGACCAC
TACCAGAACAGCCAGGTTCCTCCACAAGACCACTACCAGAACAGCCAGGT
TCCTCCACAAGACCACTACCAGAACAGCCAGGTTCCTCCACAAGACCACT
GCCAGAACAGCCAGGTTCCTCCACAAGACCACTGCCAGAACAGCCAGGTT
CCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCTACAAGACCACTG
CCAGAACAGCCAGGTTCCTCTACAAGACCACTACCAGAACAGCCAGGTTC
CTCCACAAGACCACTACCAGAACAGCCAGGTTCCTCCACAAGACCACTGC
CAGAACAGCCAGGTTCCTCTACAAGACCACTGCCAGAACAGCCACAGTCC
TCCTCCCATCCACAACAGCCTTCACAGGAAATCAATTCTTCTACAACTAC
AGGTGCTACAGCTGATAATCGGCAAAATCTAAGGGACTTATTCCCGAACT
TAACTGACTGGCAAATTTGTGAAATACTTGAATCTTATTCAGATATGGAA
GAAGCAGCAAGTTTTGCTGCAGAGATTTCGGAAAAAAACGAGAAAGGAGC
AACAATGGAATCTTTAGAAGACGTTTTTTCGTATTTTGAAAAGAAATTGC
ATCCATCGAGGCAAACACTTAGAGTTGAAGAAAAACATATTTTCTCAGAT
GTTTTGGCATTCTATAAAGGTAGAGATTTTGATCCAACAAAGAAACTTCG
TGTCATTATAGAAAACGGGCCTGGCATCGACGCTGGAGGTTTAACAAGAC
ATATGTTCGACGTTGTATTTCAAATGTTACGTAAATCCGATGGAGAGAAC
AGATATTTTGAAGGAGAGAGATTTTCTCTACTCCCTATTTGTTCCTCAAG
AACCGCCCTTTCAGAAATTTTCATAGAGTCCTGAATGGGTGATGATAGTG
ATGATAATTTGGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:304993..308966 - |
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