MSTRG.11730.1.p1 (mRNA) -

Overview
NameMSTRG.11730.1.p1
Unique NameMSTRG.11730.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000086_pilon:275652..277267-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11730.1.p1 ID=MSTRG.11730.1.p1|Name=MSTRG.11730.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1616bp|location=Sequence derived from alignment at sc0000086_pilon:275652..277267- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGTTCTTGTTGTTCGGTAGAATCTCGCCTCGGTTAATCCAGACATCTA
GACTAGTAACCGCACTTAAAAATCTCCCTTTCACAGATATAAACAAAATG
GAGGCACGAGGAGCAAGAAAACCAAAGGCAGCTGCCTCTAAATCTATGCT
TAAAAGAAGTTCAACATATATTGCCAGCTTTTATAAAAACCCAGCACGAT
GGTAAGTTATTCTTTTTTTTTTAAGTGGTCTATGACTGTGGTGCTATGAG
ATATTTACAAAAGCCCCCCTCTTTCTTTTGATGTTGGTGTTGATGATAGT
CATCATAAAACCAGTACCAGACAATCTCAATCGAACGGAATGGACGATCG
AACCAGTCGAACCAAATCGAACGCAATCGACCGATTGAAATTCGATTGTC
GAACGCAATCGAATCTCAATCGAACGTCAAAATTCTGGGTGATATTCGAT
TGGTTTGATTGTTGTTCGAACGACCCTGCCTATGCCCCGGACAGTCTGGG
GTTTTTTTGATGCGTGCCCGGGGTCCGTATTATTTGTTTTTGAGAGACTA
CCCCGGACGCCCCAGACAGCCCGCGCGGTCGCTTTTTATAGAATCGCTGA
CCGCGCGGGCTTTTTTCTAATTATACGATATACGTCCGGGGGGGTAAATT
TATGGCGCAAAAATTGGAGCCCCGGACGTAGGTCCGGGGAAAAAGTTATT
TTTTTCAGACCCCAGACATTTGCCCCGGACTGTCCGGGGCATAGGCAGGG
TCGTTTGTTCGACTGGTTCGATCGTTGATTCCGTTCGATTGAGATCGTCT
GGCTTTATTCTTGCAGCTTCTCAACATCCAAGCTCTCAAATATCACAAGC
CAAATGAAATTACTTTTGATTTCCCGTAGAAATTATGCGATGAACAATCC
GGGGGTCAATGAATCGACGATCGAACGCAATCGAATGCAATCGAACATCA
ATCGAATGCAATCGAATATCAATCGAATCTGAAAATTCCGGTAATATTCG
ATTGAGATTCGATTGCGTTCGACAATCGAATTTCAATCGGTCGATTGCGT
TCGATTTTTTCGACTGGTTCGATCGTCGATTCCGTTCGATTGAGATCTTC
TGGTCATAATTCTTTTGATTAACTGATAACCACGTTGCCTTTGCTCTTTG
TGTTTTCAGATTTACATTAAGTTTAAACAGTTAGTTTTTTACCTCTTTCT
GGCTTCTCAAAATGTTATTCTTTTTTTTTATTCAGGCAAATGGTGAAGCA
CACAGCTATATTTCTTGGCGCAATTTGGGTCGCAAGAGAATTCTCGGATA
TTGATCTTATGACGCCACCTCAAGGAGGACCAATGTAAATCATCATTGCT
CAAATCAGCCAGACCACCAAACAGAACATGGTCGAAGTTTATCTCAAATG
AACTTTGGCTCACTACTGAACCTGATGTTTCTTTGATAAGTTTTCAAAAC
AATATTAGAAAGCCATAACTTGATAGCCAACTGGTATATATTCTTTATTT
TATGAAAAACTGATATACATCATAAGTTTTGTAAATAATGCTTAGTTCTA
TGACCTGAAAATATATTTTCATATTCAAAACAATCCTAAAAGAAAAATAA
TTTTAACAAATGGCTG

Coding sequence (CDS) from alignment at sc0000086_pilon:275652..277267-

>MSTRG.11730.1.p1 ID=MSTRG.11730.1.p1|Name=MSTRG.11730.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000086_pilon:275652..277267- (Clytia hemisphaerica_ch_hm2_pilon)
GCAAATGGTGAAGCACACAGCTATATTTCTTGGCGCAATTTGGGTCGCAA
GAGAATTCTCGGATATTGATCTTATGACGCCACCTCAAGGAGGACCAATG
TAATTGTTCTTGTTGTTCGGTAGAATCTCGCCTCGGTTAATCCAGACATC
TAGACTAGTAACCGCACTTAAAAATCTCCCTTTCACAGATATAAACAAAA
TGGAGGCACGAGGAGCAAGAAAACCAAAGGCAGCTGCCTCTAAATCTATG
CTTAAAAGAAGTTCAACATATATTGCCAGCTTTTATAAAAACCCAGCACG
ATGGCAAATGGTGAAGCACACAGCTATATTTCTTGGCGCAATTTGGGTCG
CAAGAGAATTCTCGGATATTGATCTTATGACGCCACCTCAAGGAGGACCA
ATGTAATTGTTCTTGTTGTTCGGTAGAATCTCGCCTCGGTTAATCCAGAC
ATCTAGACTAGTAACCGCACTTAAAAATCTCCCTTTCACAGATATAAACA
AAATGGAGGCACGAGGAGCAAGAAAACCAAAGGCAGCTGCCTCTAAATCT
ATGCTTAAAAGAAGTTCAACATATATTGCCAGCTTTTATAAAAACCCAGC
ACGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11730MSTRG.11730Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11730.1.p1.exon2MSTRG.11730.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11730.1.p1.exon1MSTRG.11730.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11730.1.p1MSTRG.11730.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086_pilongenomesc0000086_pilon:275652..277267 -