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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:41750..45547- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11718.1.p1 ID=MSTRG.11718.1.p1|Name=MSTRG.11718.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3798bp|location=Sequence derived from alignment at sc0000086_pilon:41750..45547- (Clytia hemisphaerica_ch_hm2_pilon)
ATATTAAGCGGTACCTTTGTAGTATTTCTTTGTCGTAAAAAGCACCTGCG
AGGGAGCTCACAAAACACAAGATTTAGACTAACACATCAGTCTAGTCTTA
AATTCTTCTCCACAGAGGATATTCTTAGATTTAAATCTGATTTATTCACG
TCTCCGTCAAGAAAAGATCATTCAGGAACATAAAACGGTAGGGTTATAGG
ATGTCCCCCCTGGTCCCGGATATCAAAACAAACCTTTTCAAGACAGGATT
CTACATATCCAGGGGGTAAGTGGTGAAGTCATAAAGATGTTCAAAACCAC
CCGCTTTGTGAAGAGGTGTGGGAAATAAAGAGTCACTAACCTAGCGCCTC
TTTGTGCAATGGAAATTGATATTTAATTAAACCAGGGGGTCTTTTTCCGA
TCGAAAGATATCCTGTAGTTATTATTTCTTCACTCTGAAGAGAATCGATT
TATTTTTGAATAAATAAAATAAAGGTGTTTTGCCAAACATTTAGTTGGTC
ATTGGTGTAGGTATCCAAGGTCAAAATCTTATCACATTCAGACATTTATT
TTAGCCTTCTGTCTATATATTTTATCTTATCTCTAAAGAGATTGTGTAAC
AAGGGTGCTGTGGTTTGTAGAGGGTTGTACATAAGGACCACTTTGAGTAC
TTGGAATAGAAATCGAAATCTATTTGGAGAAAACCTACCTATTGAAAATA
TAAGCTCTAAATAAAAAATGTTTTCGATTTATTTGACCTGGAAATTTTCC
TAGACTCATTTCTTTTGCTCTTGTGACCTAGAAGTAGTGTGGTGATGATA
ATCTTTTTTGAAAGTAGGCTGCACAAATTTCGGAATAGTTTTTGCAATCC
GCTTTGGAAAACCACTACACAAAATCTACTGACGGGGTTTTCGAGCTCGA
TATGCATAACCTATAACAAAACATTTCGGCGATTTATATACAAATTTTGA
ATTCAAATTAAATAGAGTGGGTAGGCCAGCTGGTGGATGACGGGGTTAGT
TGGCAGGTGCGCTACTTGGAACCCAGGGGAGAATAATAATACCAATTTCA
AACCAATATCATTTTGTCTATTGATTTCATATCCTTTATTCTGATTGAAC
AACTTCTTACAACTCGTAAAATCTGCATTTTCGTGGACTTTGGTGAAAAG
ACGTCGATGAAGATGAATTCTAAAACGAATTTCAATGAATTAAAGTGGGT
AGGCCAGCTGGTGGACGGGGTTGGTTCTCGGGAAAAATAACTTCAAAGAA
AAATTTTATAAAGCGAATTTCAATGTTTTCTTATTACAGGACATCACTAA
TAACTAAATCCTGAAGAATAAGATTCAAGACATCATCGATATGTTGGATT
TCATGAGAATTTTGTTTTGTTTGGGATTTGTTGTAGTTGCTGTCATTGCA
GAAGCTGAGACTCAGGTACATAATTTTCCGCATCATTTCCAAACTTACCA
TCATTTTGTATATAAGATTTCCATTTCTGCACTTAGACTCCTTTGCCACT
TTTCTATGGGAAGACTCCGGGTAGCTGAAAAATAATGAGCTTTATAAAGT
TAAGCGCTATTAGTATCATTCACAAGGGAACTAAGGGGCTGGGTTCGAGT
TTGTGAATCCGTTAGTGGATGCAAGTAACCTCGTAGGGTTTTTGAGATAG
TTCACAGATGAATTTCCGTTATGTCGACATACTCTTTACCGGAACTTTTT
ACTGGTTTTACTTTAGGGCTATGATAGTCAGCAGATCTTCTAATATGGAA
GGTTAAGCTGACGCAAATTTTTGACCTCTTTAAAGATTTATACTCCTTAA
TAACGGGCTAAGTCATTAAATAATTTCGATTAACGTACAACTTTTTTTCA
CGCCAAAGGATGACAACTTAGCCAAGCGGGTATCCCATCAAACTCATATC
CCTGGGGACAAGTCACCAGGACGTAAATTTATTCTTCACTTGCGTCCCCA
TGGCGATGAACAAACAAAACAACGAAAGATGCTGCCCCTAAAGCGAGAAG
ATACTGCTGTTGATGATCTTTTTGCATCACGGTTTGGTAAGGAGGATGAG
GATGCTGCCGAGTCTACGTGGAGTGCCTGGAGAATGGGACGGGAAGCAGA
TACTGTGGACACCACCAAGAGGGTAAAGGATGCTGAGTCAGCATGGAGTG
TTTGGAGGATGGGACGGGAAACGGATGGCACTACCACTGTAAAGGACGCC
ACCACGAGGGAGCGAGATGCCTCTATCCCCAGCCATCCAAGATATCAAGT
ATTTAGGTCAGGTCGAGAAGCCGAAAAGTCGCTTCCAATGTCAAGAGCAT
TTGGTGGAAAAAGGGATTCACCCGGCGATGCTCCTATTCCTTATTATTAC
TCATTCAACAACGAAGGAAAAGATTTTTCGTGGAACATCTTTGGTAGAAA
GAGAGCAGCTGAGTCCGATCTTCCAATGTCCAGATTTGTCGATGGTCGAA
AGAGGGATTTACCCATGGGAAGAACGTTTTCCAAACGGAAATCCAACCGC
ATGTTTTCTCGTGCCGACGTTCCGTTTTTCGTCAAGCGAGGTTCAAACCT
ACCTATGAACAGAATGTTTTCTCGAAGTGCTGTTCCATACTTTGGAGAAG
GAAAGAGAGAATCGAATCATTTGCCAATGGGTATTTTTTCAAGAGAAAAA
ACCAACGCTGATGTTCCGTTTTATGTAAAACGTGCTTCAAGCCTTCCTCT
CGGTCATATGTTCTCCAAAAGAGCCAATTTCCTCAACAATCGCCTACCAA
TGCAACTTGGATTTAAACGAGCCTCAAATCTACCAATGACCAGAATGTTT
TCCAAGAGGGCGAGTCTACCAATGCTACTTGGAGTAGTCAAAAAGGAGCA
TGGTGGATTTGCACGAGCACCTGAATACAACTGGGGTCCAGCTTCCTTGA
AATATCACCGCCGTAGCCTCCTTCCAATGATAATGCACGAAAGAAAAAGA
CGCTTCAATGGATTCAGACCAGTCGTAAGTGGAATTATCAATAATGACCG
AAACCGTAAATTGAAAAACAATGTCAATGACTTTCATGTTAAAAAACTTT
GAGTATAATCCCATACGAAGCCTTTGGATGGTACACTGATTTCATGATCA
GAATGAATATAATGGAAACTTTAGATGTTATGATTTTTATTATTTCGAAG
TTAGAGTTTATTACGATGTTGGAGGAAGTGCGTCAATGCGCTACATAAAC
TATAGCCCGTGGAGCCAGTTTCTCAATCACGGCAAAGCAAAATATTTTGA
TTGCAGTTTTTTTGAAAGTGGACGAAAGCGCTATATCTACTTGTCATTGT
CTACAATGACTTTTGTGTGGTTACCGCTTTCAAAAAAAACTCCAATCAAA
GATGGCGGATATAGCTTGGTCCAAGGTCTGTTAAAGGTCAATCGCTACAT
AATACCAATCATATTCCAACCTCGTTCCCTGTGTATTATCAGCTTTTTGA
TGCCTACTGATAGCGCTAGATAATATTCTCCGGCGTTCATAGGTATTATA
AATAAAGCCTGGGGTACACGGGGACGAGGTTGAGTTCTATTAAGTTCTAA
ATCAAGCCTCGTGTTCTCAAATTATTCTTATAATAGAAAAAGCTAAAAAA
ATCGTGTTGTAGGATTGAAAAATGATGAATCTCAAATATTTGTTATCGTA
ACATTTTCATAATTTTCGCATGAAATTTTAGGTTTTCTCATTTTTACTTA
TCATCTTTGTATGTGTGACAAATTATAGTCCGTATAAATATTTTCTTAAT
AAAGGGGGTAATGAATTAAAGAAATATATTTTATGTTTATGTAGCTTA Coding sequence (CDS) from alignment at sc0000086_pilon:41750..45547- >MSTRG.11718.1.p1 ID=MSTRG.11718.1.p1|Name=MSTRG.11718.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000086_pilon:41750..45547- (Clytia hemisphaerica_ch_hm2_pilon)
GATGACAACTTAGCCAAGCGGGTATCCCATCAAACTCATATCCCTGGGGA
CAAGTCACCAGGACGTAAATTTATTCTTCACTTGCGTCCCCATGGCGATG
AACAAACAAAACAACGAAAGATGCTGCCCCTAAAGCGAGAAGATACTGCT
GTTGATGATCTTTTTGCATCACGGTTTGGTAAGGAGGATGAGGATGCTGC
CGAGTCTACGTGGAGTGCCTGGAGAATGGGACGGGAAGCAGATACTGTGG
ACACCACCAAGAGGGTAAAGGATGCTGAGTCAGCATGGAGTGTTTGGAGG
ATGGGACGGGAAACGGATGGCACTACCACTGTAAAGGACGCCACCACGAG
GGAGCGAGATGCCTCTATCCCCAGCCATCCAAGATATCAAGTATTTAGGT
CAGGTCGAGAAGCCGAAAAGTCGCTTCCAATGTCAAGAGCATTTGGTGGA
AAAAGGGATTCACCCGGCGATGCTCCTATTCCTTATTATTACTCATTCAA
CAACGAAGGAAAAGATTTTTCGTGGAACATCTTTGGTAGAAAGAGAGCAG
CTGAGTCCGATCTTCCAATGTCCAGATTTGTCGATGGTCGAAAGAGGGAT
TTACCCATGGGAAGAACGTTTTCCAAACGGAAATCCAACCGCATGTTTTC
TCGTGCCGACGTTCCGTTTTTCGTCAAGCGAGGTTCAAACCTACCTATGA
ACAGAATGTTTTCTCGAAGTGCTGTTCCATACTTTGGAGAAGGAAAGAGA
GAATCGAATCATTTGCCAATGGGTATTTTTTCAAGAGAAAAAACCAACGC
TGATGTTCCGTTTTATGTAAAACGTGCTTCAAGCCTTCCTCTCGGTCATA
TGTTCTCCAAAAGAGCCAATTTCCTCAACAATCGCCTACCAATGCAACTT
GGATTTAAACGAGCCTCAAATCTACCAATGACCAGAATGTTTTCCAAGAG
GGCGAGTCTACCAATGCTACTTGGAGTAGTCAAAAAGGAGCATGGTGGAT
TTGCACGAGCACCTGAATACAACTGGGGTCCAGCTTCCTTGAAATATCAC
CGCCGTAGCCTCCTTCCAATGATAATGCACGAAAGAAAAAGACGCTTCAA
TGGATTCAGACCAGTCGTAAGTGGAATTATCAATAATGACCGAAACCGTA
AATTGAAAAACAATGTCAATGACTTTCATGTTAAAAAACTTTGAATGTTG
GATTTCATGAGAATTTTGTTTTGTTTGGGATTTGTTGTAGTTGCTGTCAT
TGCAGAAGCTGAGACTCAGGATGACAACTTAGCCAAGCGGGTATCCCATC
AAACTCATATCCCTGGGGACAAGTCACCAGGACGTAAATTTATTCTTCAC
TTGCGTCCCCATGGCGATGAACAAACAAAACAACGAAAGATGCTGCCCCT
AAAGCGAGAAGATACTGCTGTTGATGATCTTTTTGCATCACGGTTTGGTA
AGGAGGATGAGGATGCTGCCGAGTCTACGTGGAGTGCCTGGAGAATGGGA
CGGGAAGCAGATACTGTGGACACCACCAAGAGGGTAAAGGATGCTGAGTC
AGCATGGAGTGTTTGGAGGATGGGACGGGAAACGGATGGCACTACCACTG
TAAAGGACGCCACCACGAGGGAGCGAGATGCCTCTATCCCCAGCCATCCA
AGATATCAAGTATTTAGGTCAGGTCGAGAAGCCGAAAAGTCGCTTCCAAT
GTCAAGAGCATTTGGTGGAAAAAGGGATTCACCCGGCGATGCTCCTATTC
CTTATTATTACTCATTCAACAACGAAGGAAAAGATTTTTCGTGGAACATC
TTTGGTAGAAAGAGAGCAGCTGAGTCCGATCTTCCAATGTCCAGATTTGT
CGATGGTCGAAAGAGGGATTTACCCATGGGAAGAACGTTTTCCAAACGGA
AATCCAACCGCATGTTTTCTCGTGCCGACGTTCCGTTTTTCGTCAAGCGA
GGTTCAAACCTACCTATGAACAGAATGTTTTCTCGAAGTGCTGTTCCATA
CTTTGGAGAAGGAAAGAGAGAATCGAATCATTTGCCAATGGGTATTTTTT
CAAGAGAAAAAACCAACGCTGATGTTCCGTTTTATGTAAAACGTGCTTCA
AGCCTTCCTCTCGGTCATATGTTCTCCAAAAGAGCCAATTTCCTCAACAA
TCGCCTACCAATGCAACTTGGATTTAAACGAGCCTCAAATCTACCAATGA
CCAGAATGTTTTCCAAGAGGGCGAGTCTACCAATGCTACTTGGAGTAGTC
AAAAAGGAGCATGGTGGATTTGCACGAGCACCTGAATACAACTGGGGTCC
AGCTTCCTTGAAATATCACCGCCGTAGCCTCCTTCCAATGATAATGCACG
AAAGAAAAAGACGCTTCAATGGATTCAGACCAGTCGTAAGTGGAATTATC
AATAATGACCGAAACCGTAAATTGAAAAACAATGTCAATGACTTTCATGT
TAAAAAACTTTGAATGTTGGATTTCATGAGAATTTTGTTTTGTTTGGGAT
TTGTTGTAGTTGCTGTCATTGCAGAAGCTGAGACTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000086_pilon | genome | sc0000086_pilon:41750..45547 - |
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