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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:3212731..3218155- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1171.1.p1 ID=MSTRG.1171.1.p1|Name=MSTRG.1171.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5425bp|location=Sequence derived from alignment at sc0000005_pilon:3212731..3218155- (Clytia hemisphaerica_ch_hm2_pilon)
GTCTGGAACCTAAAATTTGTACTTTTTCAGTTTAAAAGTCAAAAAATGAT
TTTTTTTGAAAAACTGCTTCATTCATCCTGAGGCTTACCATAATGGAAAA
CTACCCTGAAAATTTCAAGTCAATAGCTTTTCTCAATCCTGAGAAAAGGC
TGACAAGGTGCGGGAAAACCCCCTAAAACGTGTTTTGAGAAAAAAACGGC
GCAGAAAGTTAAAAATAGAGGTTTTTCTCAATTTTTCTGCGATACATAGA
CCGTTTTACAAAATTTTTGCTGTGGTTGACCAAAATGGATTGACACATTA
CTTTTAATGTTGAAAAGGTACTGGAAATACTAAAATAGTCCAAGTTTTTT
GAAAAAAATGGCCTTCCACGTGCTCCGGGAATCTCCAAGTATTTTGCGTC
AACTCTGCGTACAACGCGTAAACATGGCTTTAAGTCAATAAAAGTGCATT
TTCTCGTCAAAAAACATATTGCCAACAAAATATATCATCCTTGTGCTCTC
TCAAATCTGTTTATATCATTTACAGTTGAATTTCAGTGTTGATCTCTTAG
GGAAACGTGTCTTCAGGTTGAACGTCAATCATGCATAGTTTTACTCAATT
TTCCAGGATTGCCTCCTGGCGCCATGAGTGCCACGATTCATCAAAGACTG
GATTTCCACTGGATTTAAGACTCATAATGGATACATCATTGAATGTGTTT
AGTTCCTTGTTTCAAACTTTATTCATACCATGGTTCATAGTCTATAGTCC
ATCACTTTGAAAAGTTTTTTCGGTGTACAAGTTTTACTGCTCGAAAACAT
CAGTTCGCAGAATCAAATTGTTGCTTTCACTCAAATTATAGGCTTCCAAA
GCTTTCCCAGATGTGAGAAATGAAATGAAACATTCAATAATATCATAATT
CAATCCAAAACAATACATAAGCTCAGTTTCCATGTCAAAAACCACACAGC
TGACTGCCTCCAAATTTCATTTCATAAAATCTCCGCCCGATCCAATACTG
GATTACGCCCTTTTCTCGCCTTCAGTCTGCAAGTCATTGCTCAAAGCCTC
TTTCGCCAATTCGCGCTGATAAAGATGGACGCAGAGTAAGTAGAATACTT
AAAATTCCATACATTCCTTTATGAATCCAAAATCATCTAAGCTTAGCAGA
TTAACTACCTTCATTACATTCAGTGACTATGAAGGGTAGTGTTGCCCCAA
CATATTGAAGGCATTATTTTACTCGATAAAGTTTAAAAAAAAAAAAAATC
AAAAATCCTTTATTTCATTCAGTGATTATAAAGGGTAAAATAATGTTTCA
AAATCTCTTTCCTAGAAATGGTAATGGAGATAATGTCCCTGCAGCTCCTC
AGGAACCTGTAGAAGAACATGCTGATGAGGTCCAGCCCATCAACGAACAA
CCTCCAGCCCCTACTGACAGATTTGAACTCGATCCAGAGGCGGCTGAAGA
GAAATGGGAACTCCCAAACAATCTTTTAGAATACATCCACAAATATATCA
AACTGCATGTAGCTGATAAAGATATCAAAGACAGCATTGTTTGGGAAAAT
CCTGTACCAACAAATCTAAAACAGGTACCTGATCTTGACAGCTACATCCG
CACGATACTGTCAAATAATAACAAATCAATAACTCTTAAATCAGAAAAGA
CATTAAAGACAATTCAAGATAAAATGTTTTTGGTCTTTGGACCACTTTTG
AAAATTTGGGATGCAGTTGACCAGGAAAAAAGCCGAAATCCTGAGGATGA
ATCAACCGTCCACCTCTCGCATCTTCTTGACCAAACAATACTTTTGCTGT
CTCAGATCCAAAACTCATGCAACTATCACAGAAGAGAGAATATTTTGTCA
ACACTGATTGACTCCTCATCAAGAGTAAAAGATATCTTAAAGAACCAAAG
TCAAGAGCTTAACAAGGCTGATAACAAGCATTTATTTGGAGAAGAATTCG
AAACCAAATTGATTAAAGACACCAAAGCTATCAAAAAGTCAGAATCTGTA
TTTACTGGAGTGAAAGCATCATCATCTACGTCAACTAGACCCAGATTCCC
TGCAATTGGTTCAAAAAGGCCCTTTCCAGGAGGCTCTTTTCCAGCAAGCC
GTGGAAGAGGGCATTCAAGACCAGGCTTCTCATTCAGAGGTAAGAAAATT
TCCTATCTTAAACCAAAAAATATCAACTTGTTTTGTACCTCCAAAACCGA
GTCCCATTCCTCCACTAAGACAGGTCCAGGAAGAACAAGACCTTTCTTGT
GTGCACCCTCTAGTAAAATCACTGTTTCCTCAGAAACTAGTCAAAAACCT
GCCAAAGGCAGGTCGAACGAAGTTTTATTTGAAAAATTGGGAAAAACTAA
CACAAGATCCAGAGATACTGAGAACAGTTCAAGGATATCAAATACCCTTT
GTTTCAACTCCAAGGCAAAATCAAATTCCCAAATCTCCAAACATGTCAAA
AGAGGAGATATCACTAGTGGATCAGGAGATAGAGCAAATGTTGGAAAAGA
ATGCTATAGAAACAATTCATTTTCAAAACCAAAATCAATTTCTAAGTTCT
CTGTTCCTGGTTTCCAAAAAGGATGGAGGGAACAGACCAGTGATAAATCT
GAAGTCCCTAAACAAACACATTCCTTACCTTCATTTCAAGATGGAAAGCT
TGTCCTTACTCAAAGAACTTCTAAAAAAGGGGGACTTCATGGTCAAGATA
GACCTTTCGGACGCCTATTTCTCAATCCCGATAAGTCAAGAATCCAGGAA
GTATGTGAGATTCAAGTGGAAACAAAAAATTTACCAATTTCTTTGCCTGT
GCTTCGGCCTTGCTCCAGCACCCAGAGTCTTTACAAAAGTGATGAAAGTT
CCTATAGCCCTATTGAGAAGGTTGAATGTCCGCCTAATAGTTTACTTGGA
CGACATTTTAATCCTGGCGTCTTCCCTTCAAGAGATAAGAATGGCCCGGG
ACACTTTGATGTTTTTACTTCAACATCTGGGATTCAGAATCAACATGAAG
AAGTCAGTTCTAGAACCAGTTCATCAGATTCAATTTTTGGGGGTGGAAGT
GGACTCGTTGAATTTAAAATTGAGCCTGCCACCAGAGAGAATGGAAAAGA
TAATTTCCCAGTGTCAGAATATGCTGGAATCTTCTCAGGTATCGATAAGG
GATCTCACAAAACTTCTTGGCCTCTTGTCCTCAGCAGCAGTAGCAGTTCT
CCCTGCACCTCTTCAGTACAGGGCTATTCAAAGCCAACAGATAAAAGAGC
TGTCGAGACACAAAAATTTCGACTCAATGATTTCCTTATCAGAAGAGGTG
AAGGAAGAACTGAACTGGTGGTGTCAAAACCTTCAATTGACAAACGGACG
TTCTCTAGTTTTACCTCCTCCTCAACTTTTGATATCTTCAGATGCATCCA
AGGAAGGATGGGGTGCATACTGCAAGGGGAAGGAAACAGGGGGTCAATGG
TCAGCACCAGAACAGGATCTTCATATCAATGTACTAGAGTTGAAAGCTGC
AAAACAATAGCAATACTAGCATTCCACAGGCTTTTTCCACAAACATTGTC
CATTCACATTCAGATGGACAATATAGCAGCCCTTACATATTTGAAGAAAA
TGGGAGGAACCCACAGCAAACTGTTAACAGACCTAAGCAAGGAGATCTGG
AAATACCTTTTAGAGCATCAGATCACGATTACTGTAGAGTATCTTCCAGG
GCGCCTGAATGTGGAAGCAGACCGCCAATCACGATCAGTGAAAGACTCAA
GCGAATGGAAACTAAAAACTCAGATATTTCGAGAACTTTGCAAAGCAAGG
GGGACACCGTGTACAGACCTTTTTGCCTCAAGACTAACCCACCAAGTACC
TCTTTATTATTCTTGGAAAATAGATCCCTACAGCAAGGGACAGGATGCAT
TTCAGACTCAGTGGACTCACATAAGGGGGTATGCGTTCCCACCATTTTGT
CTAATAGGGAAGGTTCTTTGGAAGGTGTCAGCCGAAAAGGCAACAATCTT
GTTAATAACACCAGCCTGGCAGACTCAAAGCTGGTATCCACAACTTCTTC
AATTGTCCATTCAAAATCCTATTCTTATCCCAAACCAATGGGACCTTTTG
ATGAACCCTCAAAACATAATACACCCTCTAATACAGAACCAAAGCCTCCA
ACTGGTGGCTTGGACAGTTTCAGGGAGAGAATCCAAGCAGAGGGATTATC
GGAGAAAGCTGCAGAGCTCATCACTGCCTCAAGAAGACCAGGGACACGAT
CTCATTACAAATCGGCCTGGGGTAAGTGGGATAGCTGGTGTGGTACAAAA
CAAGTTGATCCCTTTCGATGCCCTCTAAATTTCATCATAGAGTTCTTAAC
TGATTCTTTTCAGAGTGGCCTTGAACATAGTACAATTGCTGGTTACAGGT
CCGCAATATCTGCTTACCATCAACCTATTGATGGTTTACCGGTTGGAAAA
CATCCCTTGGTTTCTTCTCTTCTCAAGGGTGTTCATAATGAAAGGTTTCC
TCAACCGAAATACAATTTTATTTGGGATGTAGATGTAGTAGTTAGATATT
TAACCTCTATTGATTCAAAAACAGCCAGTGACAAATTATTAACCTTCAAA
TTAACAATGCTCCTTTCGTTAACTTCAACAGCCAGAGCGCATGAAATAAC
TTTCCTTGACACAGCATTTTTGGTCAAGCATCACTCAAAATATATTTTTT
CATTTGGCAAACCAACTAAGGTTGACAGACCAGGAAAAGTCAGACCTCCA
ATTGAATATTTTCCTTTTAAGGACGATGAAAATCTGTGTGTTTGTAAAAA
CATTGATTTGTATTTAGAAAGAACAAAAACTTGGAGAGAGGGGAAAGGTC
AATTGTTATTGAGCTATGTGAACCCCCATAAACCAGTAGTTTCTTCTACC
GTCTCTGGATGGGTGTTAAAAACCTTATTTTTGGCAGGGATAGATACTTC
AACCTTTAAGGGACATTCTACTAGGTCGGCTTCAACTTCAAAAGCTTATG
CTCAAGGTGTTCCAATGAAAGAAATTCTAAAAAGAGCACACTGGTCAACT
TCAACCACTTTTGAAAAGCGATACAAAAAAGATTTAGTTGAGGAAAATGA
TTTTACATCAGCACTTTTCTCTAATAAATAGTACGCTTTAAACAGAGGCT
TTGAGCAATGACTTGCAGACTGAAGGCGAGAAAAGGGCGTAATCCAGTAT
TGGATCGGGCGGAGATTTTATGAAATGAAATTGAGGATTGTGCAAGGGCC
CGAAGGGCCCGCAGTGCAATCCCGATTTTATGAATAAAATCGAAGCCAAC
GATCTAATACTGCCCGCCCACCTTATTCCCCTTCATCAGCCTAATATAAC
AGTATATTATTTTATTTGTTCTCAATTTCAGGTCGTGGCAATTTCCGCGG
ACGTGGACGAGGTCGTGGCAATTAG Coding sequence (CDS) from alignment at sc0000005_pilon:3212731..3218155- >MSTRG.1171.1.p1 ID=MSTRG.1171.1.p1|Name=MSTRG.1171.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2637bp|location=Sequence derived from alignment at sc0000005_pilon:3212731..3218155- (Clytia hemisphaerica_ch_hm2_pilon)
GTCGTGGCAATTTCCGCGGACGTGGACGAGGTCGTGGCAATTAGAAATGG
TAATGGAGATAATGTCCCTGCAGCTCCTCAGGAACCTGTAGAAGAACATG
CTGATGAGGTCCAGCCCATCAACGAACAACCTCCAGCCCCTACTGACAGA
TTTGAACTCGATCCAGAGGCGGCTGAAGAGAAATGGGAACTCCCAAACAA
TCTTTTAGAATACATCCACAAATATATCAAACTGCATGTAGCTGATAAAG
ATATCAAAGACAGCATTGTTTGGGAAAATCCTGTACCAACAAATCTAAAA
CAGGTACCTGATCTTGACAGCTACATCCGCACGATACTGTCAAATAATAA
CAAATCAATAACTCTTAAATCAGAAAAGACATTAAAGACAATTCAAGATA
AAATGTTTTTGGTCTTTGGACCACTTTTGAAAATTTGGGATGCAGTTGAC
CAGGAAAAAAGCCGAAATCCTGAGGATGAATCAACCGTCCACCTCTCGCA
TCTTCTTGACCAAACAATACTTTTGCTGTCTCAGATCCAAAACTCATGCA
ACTATCACAGAAGAGAGAATATTTTGTCAACACTGATTGACTCCTCATCA
AGAGTAAAAGATATCTTAAAGAACCAAAGTCAAGAGCTTAACAAGGCTGA
TAACAAGCATTTATTTGGAGAAGAATTCGAAACCAAATTGATTAAAGACA
CCAAAGCTATCAAAAAGTCAGAATCTGTATTTACTGGAGTGAAAGCATCA
TCATCTACGTCAACTAGACCCAGATTCCCTGCAATTGGTTCAAAAAGGCC
CTTTCCAGGAGGCTCTTTTCCAGCAAGCCGTGGAAGAGGGCATTCAAGAC
CAGGCTTCTCATTCAGAGATGGACGCAGAGTCGTGGCAATTTCCGCGGAC
GTGGACGAGGTCGTGGCAATTAGAAATGGTAATGGAGATAATGTCCCTGC
AGCTCCTCAGGAACCTGTAGAAGAACATGCTGATGAGGTCCAGCCCATCA
ACGAACAACCTCCAGCCCCTACTGACAGATTTGAACTCGATCCAGAGGCG
GCTGAAGAGAAATGGGAACTCCCAAACAATCTTTTAGAATACATCCACAA
ATATATCAAACTGCATGTAGCTGATAAAGATATCAAAGACAGCATTGTTT
GGGAAAATCCTGTACCAACAAATCTAAAACAGGTACCTGATCTTGACAGC
TACATCCGCACGATACTGTCAAATAATAACAAATCAATAACTCTTAAATC
AGAAAAGACATTAAAGACAATTCAAGATAAAATGTTTTTGGTCTTTGGAC
CACTTTTGAAAATTTGGGATGCAGTTGACCAGGAAAAAAGCCGAAATCCT
GAGGATGAATCAACCGTCCACCTCTCGCATCTTCTTGACCAAACAATACT
TTTGCTGTCTCAGATCCAAAACTCATGCAACTATCACAGAAGAGAGAATA
TTTTGTCAACACTGATTGACTCCTCATCAAGAGTAAAAGATATCTTAAAG
AACCAAAGTCAAGAGCTTAACAAGGCTGATAACAAGCATTTATTTGGAGA
AGAATTCGAAACCAAATTGATTAAAGACACCAAAGCTATCAAAAAGTCAG
AATCTGTATTTACTGGAGTGAAAGCATCATCATCTACGTCAACTAGACCC
AGATTCCCTGCAATTGGTTCAAAAAGGCCCTTTCCAGGAGGCTCTTTTCC
AGCAAGCCGTGGAAGAGGGCATTCAAGACCAGGCTTCTCATTCAGAGATG
GACGCAGAGTCGTGGCAATTTCCGCGGACGTGGACGAGGTCGTGGCAATT
AGAAATGGTAATGGAGATAATGTCCCTGCAGCTCCTCAGGAACCTGTAGA
AGAACATGCTGATGAGGTCCAGCCCATCAACGAACAACCTCCAGCCCCTA
CTGACAGATTTGAACTCGATCCAGAGGCGGCTGAAGAGAAATGGGAACTC
CCAAACAATCTTTTAGAATACATCCACAAATATATCAAACTGCATGTAGC
TGATAAAGATATCAAAGACAGCATTGTTTGGGAAAATCCTGTACCAACAA
ATCTAAAACAGGTACCTGATCTTGACAGCTACATCCGCACGATACTGTCA
AATAATAACAAATCAATAACTCTTAAATCAGAAAAGACATTAAAGACAAT
TCAAGATAAAATGTTTTTGGTCTTTGGACCACTTTTGAAAATTTGGGATG
CAGTTGACCAGGAAAAAAGCCGAAATCCTGAGGATGAATCAACCGTCCAC
CTCTCGCATCTTCTTGACCAAACAATACTTTTGCTGTCTCAGATCCAAAA
CTCATGCAACTATCACAGAAGAGAGAATATTTTGTCAACACTGATTGACT
CCTCATCAAGAGTAAAAGATATCTTAAAGAACCAAAGTCAAGAGCTTAAC
AAGGCTGATAACAAGCATTTATTTGGAGAAGAATTCGAAACCAAATTGAT
TAAAGACACCAAAGCTATCAAAAAGTCAGAATCTGTATTTACTGGAGTGA
AAGCATCATCATCTACGTCAACTAGACCCAGATTCCCTGCAATTGGTTCA
AAAAGGCCCTTTCCAGGAGGCTCTTTTCCAGCAAGCCGTGGAAGAGGGCA
TTCAAGACCAGGCTTCTCATTCAGAGATGGACGCAGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:3212731..3218155 - |
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