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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:1251246..1258581- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11702.4.p1 ID=MSTRG.11702.4.p1|Name=MSTRG.11702.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7336bp|location=Sequence derived from alignment at sc0000085_pilon:1251246..1258581- (Clytia hemisphaerica_ch_hm2_pilon)
AGGAATCTCCTTCCAGCTACGCTGTTTATTGTTTTGGTTTGACCAATCAG
AGGTGGACTGGGCAAAGGGTGAGCCGTGAGCAATGCGCATGTCTATTATG
CTAAAGCGAAATGGTAAAGATACGAAGATAAACTGTTGATGGAATGTGAC
TAGAAGAAATAATGTATTTATAACCATAATTTTGACTAAAACTTGTCAAT
GTTTCATGCCAATATACTGATGGATTATACGTTTATTAATATTGGGTTGT
AATTTTGGATGATTCGCTGCAATAGCTAGGTTTAACGACTTGCAGCGATT
CCATAGAAGAAGCCAGTATTTTTATACACATAAACAACAAGTGGAGGCTC
TCCTGGTCATTGGTCATAACAGTTCAGTTTGTTTTGAACATATAGTTGAG
TTGAATTTTCAAATTTTGGTATTTATCTAGAACTCTTATACGACAATGTC
AACAGACACAGCAGATCGCTTTACCTCTAAATTTCGACAACAACGCCAGA
CAGGTGCTGGTGGTGGAACACGAGATAGGAGACGCGTCTTTGAAAGTGGA
AACGATGATACAACTAAGAACAGTGTAAGCTCATCTGGTGTAGCTGGTAG
ATATAGAAGTACTGGTGATAGGGGTGAAAAGACTGAAACCTCATCGGTAT
CCTCACGACTTAGTAAACTAAATACAAATGATGATAAAGAGGATGATACT
GAGAAAAGTTCAACAGAAAATAAACATCAAGATGAAGAAGATGCGGAAGA
ACAAGCATCTTCTCGCAAGTCACATCGAAAGGCTGGAGGTGCAAGCGCTA
AATCGGGACAAAAACGACGAGATAGAAAAAATTTAAGGGAAAAACGACGA
TCAACTGGTGTTGTTATAATGCCTGGGCAACCGGTATAAATTGTTTTGTT
TTGTTTTTCTCCAGACACTCTAAACAGGTTTTCCAAACTTTGCAGGAAAG
AAGCTTACAGGCTCATTTCAGATTATTCAGTTAGGAATGGACAATTTGTT
GCAAAGGTTTTCCTCATATAACAACATTATGATGGATAATAAAGTCAAGT
AGAATAGAAGGTTATTCAGATTATTGCAGGTTGGCCTTCATAGTGTCCTC
CCCCCCCTTTATAAAGGGGGGGGATTCTGATTTTGGCCCTTTTTTTAAAG
TATGGGGGAAAATGAAAAATTTGAAATTTGCTGGGGGAAAATAAAGAGGG
GGGAAAACTATAAATTTAGGAGATTTTGACTGGGGGAACTTCACTGATCT
CAAGGTGATCTTGTTGCCAAACCTGTTTAAGCAATAAAATCAGCAAATCT
TTTGGGATAAACCAACTTTTCAATACAATTTCATTTTTCCAGCACTTTCA
AGGCTATTTTTTCAAGCTTTCCAAAATTTCAAACTTGATTTAAGGCATTT
TTATGTTAACCATATGGGGGAACCACAAAATCTTCAAATAGCTGGGGGAA
TTCAAAAAAGAGGGGGGAACCGAAAAATTTTGAAATATGGTGGGGGAAAT
AAAAGAGGGGGGAATGGAGAAAAATTTTGATTTTTAGTGGGGGGAACCAA
CCCAGGAGGACACTATGGCCTTATTCTTAGGTTTTTGTAAATCAAACATG
ATCAGTCAAACAATCGTTAGAAATATTTGGTTATTTACCAAACCAATTTG
AGAATTTTAGCAGGCTGAAAAATTCAACTTATGTTTCATTGTCTGATATT
AGATCTTTTGCTAAACATTGCTAAAGTTGGTTTAATGTCAGCAACCCCCA
TTCCATTCTGTCAACCATTTTTGGGGAGGAATAATAGGAAGGTAAGAATA
TCACTGATTGAATCTATATTTCTTTGGTTTTAGCAAAAGGATGACTGTAT
TTGTAAGGGGGTTGTCAACATAAGACCAGCTTATAGTTCCATCAGAGCAT
ATAGTAATATTATAGTTTGGAAGGTGAGAAAGTTTTATGGCTAATATGAC
AGTTGATAGTACCGTCAACTGCTCTAACTTGGGACTATCTGACAAAACAT
GGGACGGCAATTCGGCCACCGAACCTCCAAAGTCATTTGATTTGAGTTAA
TGAACAGCGTATTAAAAAATACACGATTTCTCTTTCTCACCAAGTAGGCT
TTTAAATCGAAATATGAAAAAAAACCCGTAGTCGAACACACGCGAGTGTT
GTGCTCTCTAAGAGGAACGAAGAAGTATGATTGATAAACTTGGTGGAGTT
ATCAAAACAAATTTGTTGTCAAAGAGATTTAACAGTAAGTGAAAATACAG
GCCAGATATCAACCAGTCCCATGTTTCGACCAATGGTCCCAAGTTAGAGC
AGTTGACGGTACCATTATAGATAGTTTAGCTATAAACAATTTTATCCATT
TATCTCAGTCTTTGTGTATGCATACCACAAGTTAATATAATATTAACATG
CCCCATCTTATTCTGTCACCCATTTAAAAAAAGGAAAATTACGAAGTTTG
GAATCTGACGCTTATTGAAACTATATTTCTTTGCTTAGCGGTCAGAGAGT
AAAATATATTTTCTCTCAGTAAACATTGACTTGGACCTTGAGGAAATCCC
ATAGTTGTTTGGGAGAACACGACCGTCTTTTGGATAACTAGCTTAAACTC
CAGCATAAAAGTTTGTAATGATAACGTCATATACCTTAAGGGAAAAAATT
GTCGCAGAATTTAATTTTGCGGTTCACACAGGTTCACAGCTCAAAATTCT
GAAGTTTCGCAGAATTCAATTTTGCGGTTTGTTTAAAATATGGCTTATTT
TGCCCTAAAAAGATAAATCTTATAGGTGATTTTTTAAATCATGAAAATAT
ATTAAATTCCAAAAATATATTAAATTGTTCCTGCAAAAGTTTCTTCCTTT
AAGGTAATTGATTACCTGTCTATTACCACAGCTGTTACCTAGGGACAAGA
TAATTTATCCTGTTTTTACTGACTGGTGAAAAGAAATGTACACTGAAGTA
GTTTGTTAGTCTTAAACGACTATTATTCCCATCTCTAAAGAAGGTTGACT
GAGTTGAATGAAGGATGTCAACATTAGACCAATTTATAGAAATATAAACT
GAGCTAGTAATGTTTTGATTGTCACAAGTGCCTTAAAAGTTTTTAGATTT
TTGACTAAGCTTGTGTATTATGAGAATAGAAATTGTCAACTCTGGTTTTA
TCCCAATGCTCTCACATATTGTATTTTGGTCTAATACTGACATCCCTCAT
CTAACTTCCTTATCCTTCTCTATAGATAAAGCCATTCTAATTTGCATCAG
TCGACAAAAAAGTGCCTTTTTTGGCCACCAACGGACACTGCCCTGCCTTT
CTAAAATATGGCCTGACCATTTTAAGCAAATAGAAATAGATTCAGCCTTT
CTATTTTTTTCAGCTCTAAAAAAGGATGTTGGAATCAGATGAGGGAATTT
GACATTAGACCAAGTTAGTTATGGTAGTTTTTTCAATTGGAGTCAAATTA
ATCATACAGGAAAGTAGAAAAACAATTGAATGTTCATGAAAGTTTAAATG
AAGCAAACAAATCTTCTTCTCCTGATCTGTTGATCTTAACTGATCTGTTG
AACATTGCCTTGCAGGGCTTAGTTTTATAACCCATGCAAAAATGTTCTAA
ACACTGACATTCGTGATTTTTTCTGGCTCACAAAATCCATGAAATTAAGA
TTTTTTGATTCAAAAAGGGAACCAGAAAATATTCAACATATTAGAAAATA
ATTGATTGTCTAATACTTGCATGATCCTATGGTATTATTAATTCCACTGA
GAAAGTGATCTTATGACCATCTTCCTTAACTTCAGTGCAAGAGGCCAGGA
TTCAATTCCCACTCTGTTTCACTTGGTCCTACAGGGTCCTACCCATGACA
TACGTCATGGCATGTGATGGGAGTTGGGCACAATCACTCTGATACAAGAG
AGTAGGGAAGTTTGCCGGAAATCTGTTTGGTGACATTATTCGAATGTTTA
AGGGAGAGCTGTTGTTATCCCAAGCTTGATCAAGTAGCATGTAGAAGATT
TCGTAAATGACCCCTTTGTGAAATGAAATGATTTTTATTAAAATTTATTT
TGGTTTATTCATGAATATCAGTTACCATCAAGAAGTTTTTTAATTTTCTT
TGTATCTTTTTTCCTCATCAAATAGAAAAACCTGTGGCCTAAAATGGCTA
AAATGGCTAACAAACTACCCAAACTTGACTCTCTTTTTCCAGTACTTCTA
AAAATGCTGCATATTGACTCAATTGTTCCTATCAGTTTAGCCAGGTTTAA
TAGATAAAGTGTAATTTTAAAACATTTAGTGGTATTAGTTGTTGTTCTTC
CATTCTTATTAAATTTTGAGGTCATTGATTAGTCAAAGTAGAAATTAAAA
CTTCTGTCTATAACAATATTTTGCGAAGGAAATTTGTAAACAATAATTCT
CAGTTGAACAGTGTCGAACAAAGTTGTTTTGCTGGTTATAAAAAGAAATT
ATTCATCTTTTAAGGAATTTATTTTATTTTGATTAAATTCCTTCTTCATC
GTGTTTTTATTCAGCCTACAAAGTAAACTCTAGTAAATTCATATTTGGAT
TCTGTTTACTTTGTATTATGGAATCACATACTACTGCTACAGTTGATGCC
ATATTTGATGCCAAAATGCAGACCCTTGTTTTAAAGATGCATTCTAAAGA
AGCAGCTTCTCTTAAAAATACTCAGTCTATGTATAACTGCAAAGCGTTTC
TGTAAGTATAAGCATTGAAAGACGGATTTTAAATAATGCCAATGCGGATA
ATTCTTTTTAAATGCTATCTACTTTACGTAACAAATAAAGCTGAATAAAG
TGATAGATTGTTTTTCTATGGATGAATTAAAAAGAAAAGCCATACTTTAT
GTTTGCTGGCATGAATGAATAGGAGGTCCTCCATCTGTTGAATATTACTC
ATGGACCACCTTTTTGCAAGCTGGAGTTCAGAATAGCTGCAACTGTTTTT
ATCCTCTTTTACATAATAGACGTATAAAGTTTTATCTCTAAGAGTTTGTA
GATTCCTTATTAAGGGTGGTTTTTATCAATTAGAATGTCAGAGAGTCATT
TTAGGATTTGATGTCAGATAATATCGAGATTTGAGATTTATTTGTAGATT
CTGTGTGGAGTTTAAAAAAAAGCTTTTCATTTAAGTCTATATCATTCTTT
TCATAAGGTCTTATCAGAGATGTGATAAGAGTTTTTTGCATTCAAATTTT
GCATTCACATTTTGTGAAAGTTTGTTTGAACTGATGACTTTCTAAGGACA
AAGAATTTTTCAGTTTGACCTCTTTTTGTAAAGGTGTTAATCTATGCCTT
GTATAATAAGTAAAGAATAAGAGTCTAATTTGTGAGAACATTAAAGCTTT
TTATCTATTTCTGATGTAACTGAATCTCTATAAAGGTTACTTGTCTTTCT
TTTTGGTGGTGTAAATTCAATTGACGGATTATCTTTGTAGGGTGCAGCTC
CCGCTGACGACGAAGAAAAACAACTCCAAGAAAACACAGTGATGAATACC
GAACCTACTAATGTAAGTCTAAGCCATAATTTACTCTTTCATGAATTTCT
TTATGAAATCGATATGTCAGAATTTTAAGAATCTTTTCTTCTTTTGTTGA
CAGTGATGACTTGAAATGATTTTAAAATACTAACGATGGCATAGAGCCCA
TATTCAATTTATTTATTTCTTTACAATGATGTTCTGTTCTTTCTTTTACA
GAGTCAAGGCTCAGATAGGTAAGATTCAATTTTTTCAAATATCAATAAAC
AGGTGCTAAACAAACAAACTTTTTACTGTACCATTGACAGCACAATTTTC
ATTCCTAATTTGGTTCTTCTTCCCTTATTATATCTTTTCTATTGTATTGA
TTTAAAGATGGTCATCTCTTCTAACCTGAAAAGTTTTTGCTGTTCAAATG
GTTTAAACCTTTAATTACATTTTCAGGACGGATAGCGACTTGACAAAGCA
GATCGAAGCATACGAATCTTCAATCGAAGAATGGAAAGACGAACTCGCCA
AAGCTAAACGAGTAAGAAGCTCATTTTTTGTGCTTTTTCTTGTACTACGT
CAAGCAACAATTTGTTTAGCTTTAGTATGTTTTTGAAGGGATAATTTTTG
GTATGTTTTTGAAGGGGTAATTTTTGGTTTCATTTTTTGCTGAGGACTCT
ATTTTTATACTGCAAAAAGCAGTAATATACAGTCGCTTCGAAGGGAAGAG
CTCTTAAGGCCAGATACGATAATTGCTTTCTTATTAAATTCCTTCATCGT
TGACTTAAGTATGTCATTACACGATCGTGTAATAAGCTTCACAAGCTAAA
ACCTTTTCTATGTCAGATCTTTATCAGAATTTAATCTGAACATTTTGTCG
ATCAATGCTAATTTTTAATTTCTTTTCTTTATAGGAAATCGAAGCTCTAC
AAAAAGATAACCAACGATTGAAAGACGAGAATAGCGCCCTGTTACGTGTG
GTCGGCAGTCTATCTGGACCTCGTAAATAGTAGAAAAGAAAATTATTTTT
TTTACAATTGATACAAGTACACATCACGGTTTTTTAAAAAAAACAGAACG
AAAAAAAACAAACATTATGGAATACTGAAGAAGAAGAATGAGAAGAGATA
TAACCAGCGAAACGGTGAGACCGACTGCAGTGCTTGTTTACTTGGTCGTT
AAAAATACTCTTTAATGATAAGGAATGAAAGAAGAAAATGTTGCAGTTGG
TATTTGAAGAAACCATGTTCATAATTGCAACCTGAACTTCCTCCTTGAAT
CAATACGGCTGCAGAGTCGTTCCCTCTACATCTCATCTCTCACCCCGAGC
CTCTCTCGCTCGCCCTCCAGTATTATCGTCGTAAATAATTGTACAGCGTG
TTTTTTTGTTGCCTTTTGCACGCTGGGAATTTTGTATGTAGGTTTTATCA
GTATTAATTTATATTTTTCTACTCATCCCCCATCAAGATATTATAATATT
TGTTCTGTCTGAAGAATTTTTTCTAATGCTATTTTTTATTGTGATTTGGT
CGATCTTTAATAATATCGGGACTATAATTTTTAGTGTTATGGTGCTTGCC
CTCCCCCTTTTTCTTTCCAGTTCTTTTTTACGTTTTAGTTGCCATTTTTA
TGAAAAACAGTCTCGTAGTTACGTATTGACTATGCTCGAACACCTTTAAC
TGACACCTTAGCTAGTGAAAAGAAATAGTAACTTTTCCTGTTCTCTTACT
CTTTCTAAATGCACTTTTTTCCGATAGAAGCAGAGGTTACCACCCTTTTT
TAGAACTTTTTTTGAAATTAGTTCGCTTACTTTGTGCACACAGTCATGTT
GATTTAAGAGAAACAAAGTTTTAAAAGAAACTCAAA Coding sequence (CDS) from alignment at sc0000085_pilon:1251246..1258581- >MSTRG.11702.4.p1 ID=MSTRG.11702.4.p1|Name=MSTRG.11702.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3540bp|location=Sequence derived from alignment at sc0000085_pilon:1251246..1258581- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATCGAAGCTCTACAAAAAGATAACCAACGATTGAAAGACGAGAATAG
CGCCCTGTTACGTGTGGTCGGCAGTCTATCTGGACCTCGTAAATAGGACG
GATAGCGACTTGACAAAGCAGATCGAAGCATACGAATCTTCAATCGAAGA
ATGGAAAGACGAACTCGCCAAAGCTAAACGAAGTCAAGGCTCAGATAGGG
TGCAGCTCCCGCTGACGACGAAGAAAAACAACTCCAAGAAAACACAGTGA
TGAATACCGAACCTACTAATATGTCAACAGACACAGCAGATCGCTTTACC
TCTAAATTTCGACAACAACGCCAGACAGGTGCTGGTGGTGGAACACGAGA
TAGGAGACGCGTCTTTGAAAGTGGAAACGATGATACAACTAAGAACAGTG
TAAGCTCATCTGGTGTAGCTGGTAGATATAGAAGTACTGGTGATAGGGGT
GAAAAGACTGAAACCTCATCGGTATCCTCACGACTTAGTAAACTAAATAC
AAATGATGATAAAGAGGATGATACTGAGAAAAGTTCAACAGAAAATAAAC
ATCAAGATGAAGAAGATGCGGAAGAACAAGCATCTTCTCGCAAGTCACAT
CGAAAGGCTGGAGGTGCAAGCGCTAAATCGGGACAAAAACGACGAGATAG
AAAAAATTTAAGGGAAAAACGACGATCAACTGGTGTTGTTATAATGCCTG
GGCAACCGGAAATCGAAGCTCTACAAAAAGATAACCAACGATTGAAAGAC
GAGAATAGCGCCCTGTTACGTGTGGTCGGCAGTCTATCTGGACCTCGTAA
ATAGGACGGATAGCGACTTGACAAAGCAGATCGAAGCATACGAATCTTCA
ATCGAAGAATGGAAAGACGAACTCGCCAAAGCTAAACGAAGTCAAGGCTC
AGATAGGGTGCAGCTCCCGCTGACGACGAAGAAAAACAACTCCAAGAAAA
CACAGTGATGAATACCGAACCTACTAATATGTCAACAGACACAGCAGATC
GCTTTACCTCTAAATTTCGACAACAACGCCAGACAGGTGCTGGTGGTGGA
ACACGAGATAGGAGACGCGTCTTTGAAAGTGGAAACGATGATACAACTAA
GAACAGTGTAAGCTCATCTGGTGTAGCTGGTAGATATAGAAGTACTGGTG
ATAGGGGTGAAAAGACTGAAACCTCATCGGTATCCTCACGACTTAGTAAA
CTAAATACAAATGATGATAAAGAGGATGATACTGAGAAAAGTTCAACAGA
AAATAAACATCAAGATGAAGAAGATGCGGAAGAACAAGCATCTTCTCGCA
AGTCACATCGAAAGGCTGGAGGTGCAAGCGCTAAATCGGGACAAAAACGA
CGAGATAGAAAAAATTTAAGGGAAAAACGACGATCAACTGGTGTTGTTAT
AATGCCTGGGCAACCGGAAATCGAAGCTCTACAAAAAGATAACCAACGAT
TGAAAGACGAGAATAGCGCCCTGTTACGTGTGGTCGGCAGTCTATCTGGA
CCTCGTAAATAGGACGGATAGCGACTTGACAAAGCAGATCGAAGCATACG
AATCTTCAATCGAAGAATGGAAAGACGAACTCGCCAAAGCTAAACGAAGT
CAAGGCTCAGATAGGGTGCAGCTCCCGCTGACGACGAAGAAAAACAACTC
CAAGAAAACACAGTGATGAATACCGAACCTACTAATATGTCAACAGACAC
AGCAGATCGCTTTACCTCTAAATTTCGACAACAACGCCAGACAGGTGCTG
GTGGTGGAACACGAGATAGGAGACGCGTCTTTGAAAGTGGAAACGATGAT
ACAACTAAGAACAGTGTAAGCTCATCTGGTGTAGCTGGTAGATATAGAAG
TACTGGTGATAGGGGTGAAAAGACTGAAACCTCATCGGTATCCTCACGAC
TTAGTAAACTAAATACAAATGATGATAAAGAGGATGATACTGAGAAAAGT
TCAACAGAAAATAAACATCAAGATGAAGAAGATGCGGAAGAACAAGCATC
TTCTCGCAAGTCACATCGAAAGGCTGGAGGTGCAAGCGCTAAATCGGGAC
AAAAACGACGAGATAGAAAAAATTTAAGGGAAAAACGACGATCAACTGGT
GTTGTTATAATGCCTGGGCAACCGGAAATCGAAGCTCTACAAAAAGATAA
CCAACGATTGAAAGACGAGAATAGCGCCCTGTTACGTGTGGTCGGCAGTC
TATCTGGACCTCGTAAATAGGACGGATAGCGACTTGACAAAGCAGATCGA
AGCATACGAATCTTCAATCGAAGAATGGAAAGACGAACTCGCCAAAGCTA
AACGAAGTCAAGGCTCAGATAGGGTGCAGCTCCCGCTGACGACGAAGAAA
AACAACTCCAAGAAAACACAGTGATGAATACCGAACCTACTAATATGTCA
ACAGACACAGCAGATCGCTTTACCTCTAAATTTCGACAACAACGCCAGAC
AGGTGCTGGTGGTGGAACACGAGATAGGAGACGCGTCTTTGAAAGTGGAA
ACGATGATACAACTAAGAACAGTGTAAGCTCATCTGGTGTAGCTGGTAGA
TATAGAAGTACTGGTGATAGGGGTGAAAAGACTGAAACCTCATCGGTATC
CTCACGACTTAGTAAACTAAATACAAATGATGATAAAGAGGATGATACTG
AGAAAAGTTCAACAGAAAATAAACATCAAGATGAAGAAGATGCGGAAGAA
CAAGCATCTTCTCGCAAGTCACATCGAAAGGCTGGAGGTGCAAGCGCTAA
ATCGGGACAAAAACGACGAGATAGAAAAAATTTAAGGGAAAAACGACGAT
CAACTGGTGTTGTTATAATGCCTGGGCAACCGGAAATCGAAGCTCTACAA
AAAGATAACCAACGATTGAAAGACGAGAATAGCGCCCTGTTACGTGTGGT
CGGCAGTCTATCTGGACCTCGTAAATAGGACGGATAGCGACTTGACAAAG
CAGATCGAAGCATACGAATCTTCAATCGAAGAATGGAAAGACGAACTCGC
CAAAGCTAAACGAAGTCAAGGCTCAGATAGGGTGCAGCTCCCGCTGACGA
CGAAGAAAAACAACTCCAAGAAAACACAGTGATGAATACCGAACCTACTA
ATATGTCAACAGACACAGCAGATCGCTTTACCTCTAAATTTCGACAACAA
CGCCAGACAGGTGCTGGTGGTGGAACACGAGATAGGAGACGCGTCTTTGA
AAGTGGAAACGATGATACAACTAAGAACAGTGTAAGCTCATCTGGTGTAG
CTGGTAGATATAGAAGTACTGGTGATAGGGGTGAAAAGACTGAAACCTCA
TCGGTATCCTCACGACTTAGTAAACTAAATACAAATGATGATAAAGAGGA
TGATACTGAGAAAAGTTCAACAGAAAATAAACATCAAGATGAAGAAGATG
CGGAAGAACAAGCATCTTCTCGCAAGTCACATCGAAAGGCTGGAGGTGCA
AGCGCTAAATCGGGACAAAAACGACGAGATAGAAAAAATTTAAGGGAAAA
ACGACGATCAACTGGTGTTGTTATAATGCCTGGGCAACCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:1251246..1258581 - |
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