|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:1143689..1147159- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11699.3.p2 ID=MSTRG.11699.3.p2|Name=MSTRG.11699.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3471bp|location=Sequence derived from alignment at sc0000085_pilon:1143689..1147159- (Clytia hemisphaerica_ch_hm2_pilon)
ACTTTGAAGAGTCCTCTTAATGGATTATTTTACTGGGTAAGCATTGCGTT
GTTTTGAAATTGAAATTTGCTGAAAACTATTGGTGCTCATTTTTTAGTTT
AGTGAATAAAGATAAATGATGAATATGAAATAAACATGATATGGGACCAT
GGGCACTATTTGGAAGTGTTAGAAAGCTGGGAAGACGAACATTTAATTTC
AGGTATAATGGTTCTTGATTTCATAAATCATTCTTTGATTGTACTACAGA
ATGTGCGACTAATTATGTTGTTTCCTTTCTACCATGCCTATAAAATTAAT
TCATTAGTTTAAGCTGGATGAAATCAATAATTAACTGTTCACTAAGTATA
GCTAGTTAGTTTGCTCAAATTAATGTCTTGTCTAAAGATCTGTGTTTTAT
TTAGACCCCAAATAAATTTATAAAAGCAATGCCAATAAGCTCTTGGCATG
ATTCTTTATCTTTCACAATCGCTTTAACATCAAACCTTAAGGGTTTGCTT
GTATTTTTTATGAGTTTTATGTTACGAATTCAGCTTTACATTAAATAAAT
TATGTAAACGAAAAATGACGAAGAAAGGAATTGTATACAAATCACAAACT
GGTATGATAATGAGTTGCTAAATAGGCCCTAAAAGTTTGTTGTGAATGAA
ACTGCTACCTGAATAATAATGAACAAACGATTGTTTTCTGTTTAAATTTC
TGATATGATTTTTATTTACAAATCCTTTTTTGCATGAAATTGACATTGTA
CTTTTTCTTCATTTAGGTCGATTAGTTTATGCGTAAACTCAAATAAAAAA
ATGGCGGCTTCTGAAACTCCAGAAAACATTTTCGAATTCGCCGAAGCTTA
TACAATAGCCAAGAGTTCAAGTGAATGCAGTAAAACTTGGGAGGGAATCA
TCCGTATGTTTGATGTCAATATCAGTCGAGGGAAAATGATTGTCCCTGAA
ACTTTTCAACCGAAAGTTCAACGATGGTTTTCACATTCGGACGATGACAG
TCCAAAAGATGCCATCACAAGAGCTGAAAATCAAGTCATTGGTATGTGAA
GTTTTTACGTTACGTATTTCTCCGTAAGTAGGTATTAAAATTATTTATAA
ATGAGTCCTGGGAAGGACAAAACACGTGTCTGTGGATAGATGTAGTATGA
ATTTACTCTATTGCATTCTATGCTTTTTTGGTCCTTTCTCTGATATCAGC
CACTACAATAATCCCTTGTGTGATTTTTTAATTAAGTATCAAAATTCCTA
AACTTGCTCTCGGTCTTTGACTTTCTCTCTTTCATTTCTTCTTTTTGGCG
AGCCTTGTTTTGATATCAGCACAATCTCTTTCTATTGAATGTCTGAATTG
CTGACTCTCCATCGTAACGAACGGCAACCAAATTGGCCATCTAAACTAAA
CATTTTCTTGCTTTTTGATGTTTCATAGTTCGTATAGTTAACAAATGGAC
ATTCGAGCAAACACTGTTCAATCCCATACGTTCAAGGAGACCATTGAATA
TAAACAACAAGGAAAACAGAAGTAAAGAGGATGAAAAAGATGCTTTGTCA
GCAGTTTCGTCTTCCTGCGATTTCTGCATGAGAGAAGAATACACTGCTAT
TGGTATGTGTTCTCGTGGAGTTTGATCACCTGGTGAATGCCCAGGAGGTT
TTGAGTTAGTATCACCGATTTTCTAACTTAACCAGGCCACCTTTCTTTGT
CAGAACCAACTAAGCTTAATTTCATTTTTCTTTTCATTCTGGCTAAATGA
TTGAGTAGAATATTTTGAGCTCCATCTCTTATCAGAAAATTGTTTGTATT
GATCAAAAGGGTTCTCCTTGATACACTCGGTGTCGGTGTGTTAGTATTGA
CATTTATCTTTACTTTAACTCTAAAGATTCCTGGGGACGAATCGAACGCA
AAACTGCAATAACTGCATCCAATTGCGCCAAGTATGACGCCTTTCACAGT
ATGATTATCTTTAAAGACCATCATCCTCTCAAGTATTCGAAGGTAATTCA
AAACATTTTTCTATGTTTTCCCTCAAGGGCCATTGCTTAACGAGAGAAAC
TTAAGGCCGATCTCCACTTTCGCGCGAAATGGGTGACAGTTTTTTTCTTA
ACCTTTTTTGCCTGAAGAAAAGATTACATCATAAAAAAGTTTCGCGCGAA
CAAAAAAAAAGTTGAAGGAAGTTCTACTTTTTTCATCCGTTACGTCAATT
TCGACCAATGGAATTGCTTCATTTTTCAACCGACCAATGACCTTACAAAA
ACGTCAAAAAGTTTTCGCTCATGTCGCGTGAAAGTGGAGACCGGCCTTTA
GTATTGCATAGTCTTCAATTTCGAGAACTACTGAAAAATGTCAATTTTAA
AAGCAATGAAATAAAAAAGCATGAGAACTTATTAAGATCTTTTGCCTGAA
AACAACTATAACAAATAACAAAAGGCTCTGTTAAAATTTGCTGTTCGTCG
ATAGATGAAAGGTTTTCTTTTAATACTATTGTAATTTTAGGAATTATTGA
CAGACATTTTCAGCATTTGTGAAGAGTGGTTTCTACGAGCTCATGAAACA
AACGAGAAGGCAATTTACCCGATGTTTTCATGGAATTGCCAAGGACGAGC
TGGAGCTTCACAAATTCACGGTCATGCACATGTTTTGTTAGGCGAAAACT
TCCCTTATGGCAGGTACCAGTATCTGCAACATGTCGCAAAGAATTATAAC
TTAGCAAACCCTAATAGAAATTATTTTATGGATTTGATCTCGACTTCAAG
AACATTGGGCCTTGCCAAGTCTGTTGGGGAATCAACGATTTTGATCAATC
TGACACCCGGTTTTCCATACGACCTGATTGTCTTATCATGGAATTTTAAC
CAAGACTTTCAAGATGCTATGAATGAAGCAATCAAATTACTGACTCAGCA
ATTCGGATCTGTCAGTTTTAATGTAACTATCAGTTTCCCACCATTAGAAG
ATGGGAAAGTTAGAAAAACTATCGATGCTAATTGTTTGAAAGAAGCTTTA
TGTAAAGAATTTGCACCGATGCCATACATTGGATGTCTGATTGATCGCGG
AGACCCGAGCAGCATGGCATCAGATATGTGTGGCCAGAGGATTTTATTGG
GAAACAATCTTGTACCTACTGACCCTTTCTACGCTGGGAAGGTTTTAACT
GAAGTAATCCAAAATGGACAATGATGTAATTTTTAGACCGTTTTTAGACA
GAATTTAGAAATTTTAAGATTTTTACGATTCCATTGTTGGTGTTGATATG
ATTTAAGCCAGTGACTTTTTTTATAGCTTCACCAAAGCTTTAGTTGATTT
GTTGTTTTATACACACACACTAGTAAAACCTTATGGTATTCTATTTATGA
ATTATTTAATTAGTATATTTTTTACAATATCAAGTAAGTTGAAAATGATT
GTCAACAACTACAAAGTGCTCTACCAGAAGGAGCCTTAATATTCTTTACA
ATAGTAAGTTAGGACCTTAAG Coding sequence (CDS) from alignment at sc0000085_pilon:1143689..1147159- >MSTRG.11699.3.p2 ID=MSTRG.11699.3.p2|Name=MSTRG.11699.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1602bp|location=Sequence derived from alignment at sc0000085_pilon:1143689..1147159- (Clytia hemisphaerica_ch_hm2_pilon)
TTCGTATAGTTAACAAATGGACATTCGAGCAAACACTGTTCAATCCCATA
CGTTCAAGGAGACCATTGAATATAAACAACAAGGAAAACAGAAGTAAAGA
GGATGAAAAAGATGCTTTGTCAGCAGTTTCGTCTTCCTGCGATTTCTGCA
TGAGAGAAGAATACACTGCTATTGGTATGTGTTCTCGTGGAGTTTGAGTC
GATTAGTTTATGCGTAAACTCAAATAAAAAAATGGCGGCTTCTGAAACTC
CAGAAAACATTTTCGAATTCGCCGAAGCTTATACAATAGCCAAGAGTTCA
AGTGAATGCAGTAAAACTTGGGAGGGAATCATCCGTATGTTTGATGTCAA
TATCAGTCGAGGGAAAATGATTGTCCCTGAAACTTTTCAACCGAAAGTTC
AACGATGGTTTTCACATTCGGACGATGACAGTCCAAAAGATGCCATCACA
AGAGCTGAAAATCAAGTCATTGATGGGACCATGGGCACTATTTGGAAGTG
TTAGAAAGCTGGGAAGACGAACATTTAATTTCAGTTCGTATAGTTAACAA
ATGGACATTCGAGCAAACACTGTTCAATCCCATACGTTCAAGGAGACCAT
TGAATATAAACAACAAGGAAAACAGAAGTAAAGAGGATGAAAAAGATGCT
TTGTCAGCAGTTTCGTCTTCCTGCGATTTCTGCATGAGAGAAGAATACAC
TGCTATTGGTATGTGTTCTCGTGGAGTTTGAGTCGATTAGTTTATGCGTA
AACTCAAATAAAAAAATGGCGGCTTCTGAAACTCCAGAAAACATTTTCGA
ATTCGCCGAAGCTTATACAATAGCCAAGAGTTCAAGTGAATGCAGTAAAA
CTTGGGAGGGAATCATCCGTATGTTTGATGTCAATATCAGTCGAGGGAAA
ATGATTGTCCCTGAAACTTTTCAACCGAAAGTTCAACGATGGTTTTCACA
TTCGGACGATGACAGTCCAAAAGATGCCATCACAAGAGCTGAAAATCAAG
TCATTGATGGGACCATGGGCACTATTTGGAAGTGTTAGAAAGCTGGGAAG
ACGAACATTTAATTTCAGTTCGTATAGTTAACAAATGGACATTCGAGCAA
ACACTGTTCAATCCCATACGTTCAAGGAGACCATTGAATATAAACAACAA
GGAAAACAGAAGTAAAGAGGATGAAAAAGATGCTTTGTCAGCAGTTTCGT
CTTCCTGCGATTTCTGCATGAGAGAAGAATACACTGCTATTGGTATGTGT
TCTCGTGGAGTTTGAGTCGATTAGTTTATGCGTAAACTCAAATAAAAAAA
TGGCGGCTTCTGAAACTCCAGAAAACATTTTCGAATTCGCCGAAGCTTAT
ACAATAGCCAAGAGTTCAAGTGAATGCAGTAAAACTTGGGAGGGAATCAT
CCGTATGTTTGATGTCAATATCAGTCGAGGGAAAATGATTGTCCCTGAAA
CTTTTCAACCGAAAGTTCAACGATGGTTTTCACATTCGGACGATGACAGT
CCAAAAGATGCCATCACAAGAGCTGAAAATCAAGTCATTGATGGGACCAT
GGGCACTATTTGGAAGTGTTAGAAAGCTGGGAAGACGAACATTTAATTTC
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:1143689..1147159 - |
|
