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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:1137405..1140219+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11696.7.p1 ID=MSTRG.11696.7.p1|Name=MSTRG.11696.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2815bp|location=Sequence derived from alignment at sc0000085_pilon:1137405..1140219+ (Clytia hemisphaerica_ch_hm2_pilon)
gagtgcccccccccccgggattgaTCTATGTggtgaaaattgtcaaaaga
tTAACTCCATGCCATGGATATCATGGTTGTCGCACAGAAAGGGGATTTAA
CATTGaacatatatatttttatgCTCAATAAGAGTATGTTTCTCTTGTTT
CCCTCAGTTTCATTTTCGAacgcaaaatatcaaaaagaaaaaaatcaaaa
tggcggaaaaaGCGatgatttattttgtttttagcgTTTTCCTTTCCTTT
CCAGCACCAAGCTCCCAGGTAAATATGTTAATTAAATTAGAGCCTCTAGA
GTGTGTAGCGcgtctttaaactttttttttccatAGTTCTTAGTTATATA
GATGGCACAACACATTATCAATTGAAAAACCTTCTGAAACATGCAAACCA
CACAAGCCCAAACCAACTAAtattccaaaaccatcccatcAAATCAATta
acttttagattttttgattttacagaTGGCTAAAAGTCTCTTCATGCCAC
TATCGAGTCTACAAGATTTGGGATTCATTATCAAACCTCACAAAGATAAT
GTCTACAACGACATTCATAAAAGGATGGTAAGTTATTTATCAACAGCTCC
TTGGTAATCATAGATCGAACTTTTCGATGCCATGATAGGATCTCCTTATC
TAGAATGTAAAGATCTTATTCTCAAAATTGGCATAAAACGATCTAATATA
AACAACACCGTTATTTTGCATCGGATAGTGCAGATACACTGTATATATTG
TGAATGTTAATATAATCTCTACCAAATCTAGACTTAATAAACAACAACTA
GAGAAATATCATATGAGCTGTATTCCTTATTGAAATTACAGGACATCAAT
TCGAACTCCAACATCGAAGTACCAATCGAGATAGCTAAACAGTTGGGACT
TCTAAAACCTCCAGGGGCCGGAGGATGTCCACCGTGTCCCAACCCTCCTT
GTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGTCTATTTCAGAA
GTGCAGATCAATGGTAAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTT
CAGTGTTGGTGATGCTCCACCTCCTGGTATTGTGCATCCAGTAAGTTCTT
TTGTTCATAATCAttgcaaaaaaagttaaaaagccATACAACGGAGTATA
ATCTACTCAGATTTTGAAATGTAGAAAATCAagatgtaaaatgtaaaaat
aagtATAGggtcaacactttttttcatacTACACTTTAGGAATTGTTAAC
ACTGAATTTGAAAGGTAAAGATGGACGCATTGGAAAACCAGGACCCAAGG
GACCACCAGGAGATGCTGGCCCACCAGGCTCACAAGGTCCAATGGGTCCC
AAAGGAGAACAAGGTGATGAATGTATTGCATCCAAGATGCCAAAAGATGT
GAGTTATATTTAGTGCATTCAATAAATTCCAATATTAAATTAGGCTTGCA
ATTAAGGCGATGCTATTCTGTAATGAATGTCATACTTGACATTGAAATCA
ATAAGAAGCTCAAAGGAAAGCACTGATATATACTAAAACATTTCCTTGCA
GAAACAATGTTCACCAGACATCGTGAGCAACCTTCGTGCAAGATTGGAGA
AAGTGGAGAAATGTGCAACCGTAAGTATTCATCAAGATATGTCTTCTCCT
CAAATATGGTCAGTCAAGAACCTTTTATAAAATATCCCCATTTAATCATC
AAAATTCATTGAATTAAATATAACTTTACTGCAATCGACAAGTATTTTAA
CTCATACCCATATGTAATAATCACGACATTGAAGACATCATATAAAATtc
aatttaatcatttttagaATACAACCTTGTTAGCAGCCATAACATTGAAC
GTATTGAGTACACTTGCAAATCAAAGACACGAAAAACCTAAGTCCATTCT
CGTCAAACAAAAACGCCCTCCACCTCCACCACCGCCCGCTGCACCAGCCC
CTCCTCCGCCTCCTGCTCAACCTGCCGCTCCACCAGCACCCGCTAGTCCA
CCTTCACCTCCATCGCCACCCTCGGGACAGCCAGCAACTGCTGCACCACC
TTGTCCTGCAGGACCAGGGAAATGTGACGGAAATCAAGGCAGTAAGTATT
AAATCAGGAAATATTTGtagaaatcaaaacataaaattatttcACTGTGA
GTCAAAAGGTAACCTTGTCTCCATAAAGTCTAGTCTTAAATAATAAAGCT
GTTGAAATGAATGAAGGAATAAATCCTACTACGAACCTCAGTTATATCAA
CTCTCTTGAAAATGTATATCATATATTCTTTAGATGCCAATGTCCAATCA
GATGTCAAGATCGACCTGACAGGAGGCGCTGACAAACAACAACCAGCTTG
TAAACGATCTGGCACGTGCGCAACCGATCCGTCTAAAACAGCCAATGCAT
TGCAAACACTACAACAGCTTCTAAACCAAGCTAAagcacaacaacaacaa
aatcctGTGGCCAAAGATTCTGCAACTGTCTTGGTGAATGGTGTACCGGT
TAAAATACCGCTCGGGAAATAAATTGAAAGCAATGCAACTGTCATTCATT
GGGCATCTTTCATTTGTGCTATCTGTCTATCTAAGTAGTAAATACATTAC
AATAAATTTGTTAAATAAAAATAGCGTCTAATCgatataaaatttttatt
ataattttgatatttctcaATTCTTATGactaatcagatggtttgagatg
tttttgttttttgaaccTTTCTGTGAGCCCTGAGTAAAACCAAGAAATCC
AAGTAGCAAGAATTCCAGTGTAAAAAGCGTGCAAGTACCCCAACTTAAAA
AATTGTGATTGAAAA Coding sequence (CDS) from alignment at sc0000085_pilon:1137405..1140219+ >MSTRG.11696.7.p1 ID=MSTRG.11696.7.p1|Name=MSTRG.11696.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=8127bp|location=Sequence derived from alignment at sc0000085_pilon:1137405..1140219+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcggaaaaaGCGatgatttattttgtttttagcgTTTTCCTTTCCTT
TCCAGCACCAAGCTCCCAGaTGGCTAAAAGTCTCTTCATGCCACTATCGA
GTCTACAAGATTTGGGATTCATTATCAAACCTCACAAAGATAATGTCTAC
AACGACATTCATAAAAGGATGGACATCAATTCGAACTCCAACATCGAAGT
ACCAATCGAGATAGCTAAACAGTTGGGACTTCTAAAACCTCCAGGGGCCG
GAGGATGTCCACCGTGTCCCAACCCTCCTTGTACTGGAGGTCCTGCAGGA
TGTGATGTCAAAGCTAAGTCTATTTCAGAAGTGCAGATCAATGGTAAAGG
TGATTACAGTGCACCAGTGGGGCCAGTTTTCAGTGTTGGTGATGCTCCAC
CTCCTGGTATTGTGCATCCAGAATTGTTAACACTGAATTTGAAAGGTAAA
GATGGACGCATTGGAAAACCAGGACCCAAGGGACCACCAGGAGATGCTGG
CCCACCAGGCTCACAAGGTCCAATGGGTCCCAAAGGAGAACAAGGTGATG
AATGTATTGCATCCAAGATGCCAAAAGATAAACAATGTTCACCAGACATC
GTGAGCAACCTTCGTGCAAGATTGGAGAAAGTGGAGAAATGTGCAACCaA
TACAACCTTGTTAGCAGCCATAACATTGAACGTATTGAGTACACTTGCAA
ATCAAAGACACGAAAAACCTAAGTCCATTCTCGTCAAACAAAAACGCCCT
CCACCTCCACCACCGCCCGCTGCACCAGCCCCTCCTCCGCCTCCTGCTCA
ACCTGCCGCTCCACCAGCACCCGCTAGTCCACCTTCACCTCCATCGCCAC
CCTCGGGACAGCCAGCAACTGCTGCACCACCTTGTCCTGCAGGACCAGGG
AAATGTGACGGAAATCAAGGCAATGCCAATGTCCAATCAGATGTCAAGAT
CGACCTGACAGGAGGCGCTGACAAACAACAACCAGCTTGTAAACGATCTG
GCACGTGCGCAACCGATCCGTCTAAAACAGCCAATGCATTGCAAACACTA
CAACAGCTTCTAAACCAAGCTAAagcacaacaacaacaaaatcctGTGGC
CAAAGATTCTGCAACTGTCTTGGTGAATGGTGTACCGGTTAAAATACCGC
TCGGGAAATAAatggcggaaaaaGCGatgatttattttgtttttagcgTT
TTCCTTTCCTTTCCAGCACCAAGCTCCCAGaTGGCTAAAAGTCTCTTCAT
GCCACTATCGAGTCTACAAGATTTGGGATTCATTATCAAACCTCACAAAG
ATAATGTCTACAACGACATTCATAAAAGGATGGACATCAATTCGAACTCC
AACATCGAAGTACCAATCGAGATAGCTAAACAGTTGGGACTTCTAAAACC
TCCAGGGGCCGGAGGATGTCCACCGTGTCCCAACCCTCCTTGTACTGGAG
GTCCTGCAGGATGTGATGTCAAAGCTAAGTCTATTTCAGAAGTGCAGATC
AATGGTAAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTTCAGTGTTGG
TGATGCTCCACCTCCTGGTATTGTGCATCCAGAATTGTTAACACTGAATT
TGAAAGGTAAAGATGGACGCATTGGAAAACCAGGACCCAAGGGACCACCA
GGAGATGCTGGCCCACCAGGCTCACAAGGTCCAATGGGTCCCAAAGGAGA
ACAAGGTGATGAATGTATTGCATCCAAGATGCCAAAAGATAAACAATGTT
CACCAGACATCGTGAGCAACCTTCGTGCAAGATTGGAGAAAGTGGAGAAA
TGTGCAACCaATACAACCTTGTTAGCAGCCATAACATTGAACGTATTGAG
TACACTTGCAAATCAAAGACACGAAAAACCTAAGTCCATTCTCGTCAAAC
AAAAACGCCCTCCACCTCCACCACCGCCCGCTGCACCAGCCCCTCCTCCG
CCTCCTGCTCAACCTGCCGCTCCACCAGCACCCGCTAGTCCACCTTCACC
TCCATCGCCACCCTCGGGACAGCCAGCAACTGCTGCACCACCTTGTCCTG
CAGGACCAGGGAAATGTGACGGAAATCAAGGCAATGCCAATGTCCAATCA
GATGTCAAGATCGACCTGACAGGAGGCGCTGACAAACAACAACCAGCTTG
TAAACGATCTGGCACGTGCGCAACCGATCCGTCTAAAACAGCCAATGCAT
TGCAAACACTACAACAGCTTCTAAACCAAGCTAAagcacaacaacaacaa
aatcctGTGGCCAAAGATTCTGCAACTGTCTTGGTGAATGGTGTACCGGT
TAAAATACCGCTCGGGAAATAAatggcggaaaaaGCGatgatttattttg
tttttagcgTTTTCCTTTCCTTTCCAGCACCAAGCTCCCAGaTGGCTAAA
AGTCTCTTCATGCCACTATCGAGTCTACAAGATTTGGGATTCATTATCAA
ACCTCACAAAGATAATGTCTACAACGACATTCATAAAAGGATGGACATCA
ATTCGAACTCCAACATCGAAGTACCAATCGAGATAGCTAAACAGTTGGGA
CTTCTAAAACCTCCAGGGGCCGGAGGATGTCCACCGTGTCCCAACCCTCC
TTGTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGTCTATTTCAG
AAGTGCAGATCAATGGTAAAGGTGATTACAGTGCACCAGTGGGGCCAGTT
TTCAGTGTTGGTGATGCTCCACCTCCTGGTATTGTGCATCCAGAATTGTT
AACACTGAATTTGAAAGGTAAAGATGGACGCATTGGAAAACCAGGACCCA
AGGGACCACCAGGAGATGCTGGCCCACCAGGCTCACAAGGTCCAATGGGT
CCCAAAGGAGAACAAGGTGATGAATGTATTGCATCCAAGATGCCAAAAGA
TAAACAATGTTCACCAGACATCGTGAGCAACCTTCGTGCAAGATTGGAGA
AAGTGGAGAAATGTGCAACCaATACAACCTTGTTAGCAGCCATAACATTG
AACGTATTGAGTACACTTGCAAATCAAAGACACGAAAAACCTAAGTCCAT
TCTCGTCAAACAAAAACGCCCTCCACCTCCACCACCGCCCGCTGCACCAG
CCCCTCCTCCGCCTCCTGCTCAACCTGCCGCTCCACCAGCACCCGCTAGT
CCACCTTCACCTCCATCGCCACCCTCGGGACAGCCAGCAACTGCTGCACC
ACCTTGTCCTGCAGGACCAGGGAAATGTGACGGAAATCAAGGCAATGCCA
ATGTCCAATCAGATGTCAAGATCGACCTGACAGGAGGCGCTGACAAACAA
CAACCAGCTTGTAAACGATCTGGCACGTGCGCAACCGATCCGTCTAAAAC
AGCCAATGCATTGCAAACACTACAACAGCTTCTAAACCAAGCTAAagcac
aacaacaacaaaatcctGTGGCCAAAGATTCTGCAACTGTCTTGGTGAAT
GGTGTACCGGTTAAAATACCGCTCGGGAAATAAatggcggaaaaaGCGat
gatttattttgtttttagcgTTTTCCTTTCCTTTCCAGCACCAAGCTCCC
AGaTGGCTAAAAGTCTCTTCATGCCACTATCGAGTCTACAAGATTTGGGA
TTCATTATCAAACCTCACAAAGATAATGTCTACAACGACATTCATAAAAG
GATGGACATCAATTCGAACTCCAACATCGAAGTACCAATCGAGATAGCTA
AACAGTTGGGACTTCTAAAACCTCCAGGGGCCGGAGGATGTCCACCGTGT
CCCAACCCTCCTTGTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAA
GTCTATTTCAGAAGTGCAGATCAATGGTAAAGGTGATTACAGTGCACCAG
TGGGGCCAGTTTTCAGTGTTGGTGATGCTCCACCTCCTGGTATTGTGCAT
CCAGAATTGTTAACACTGAATTTGAAAGGTAAAGATGGACGCATTGGAAA
ACCAGGACCCAAGGGACCACCAGGAGATGCTGGCCCACCAGGCTCACAAG
GTCCAATGGGTCCCAAAGGAGAACAAGGTGATGAATGTATTGCATCCAAG
ATGCCAAAAGATAAACAATGTTCACCAGACATCGTGAGCAACCTTCGTGC
AAGATTGGAGAAAGTGGAGAAATGTGCAACCaATACAACCTTGTTAGCAG
CCATAACATTGAACGTATTGAGTACACTTGCAAATCAAAGACACGAAAAA
CCTAAGTCCATTCTCGTCAAACAAAAACGCCCTCCACCTCCACCACCGCC
CGCTGCACCAGCCCCTCCTCCGCCTCCTGCTCAACCTGCCGCTCCACCAG
CACCCGCTAGTCCACCTTCACCTCCATCGCCACCCTCGGGACAGCCAGCA
ACTGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATGTGACGGAAATCA
AGGCAATGCCAATGTCCAATCAGATGTCAAGATCGACCTGACAGGAGGCG
CTGACAAACAACAACCAGCTTGTAAACGATCTGGCACGTGCGCAACCGAT
CCGTCTAAAACAGCCAATGCATTGCAAACACTACAACAGCTTCTAAACCA
AGCTAAagcacaacaacaacaaaatcctGTGGCCAAAGATTCTGCAACTG
TCTTGGTGAATGGTGTACCGGTTAAAATACCGCTCGGGAAATAAatggcg
gaaaaaGCGatgatttattttgtttttagcgTTTTCCTTTCCTTTCCAGC
ACCAAGCTCCCAGaTGGCTAAAAGTCTCTTCATGCCACTATCGAGTCTAC
AAGATTTGGGATTCATTATCAAACCTCACAAAGATAATGTCTACAACGAC
ATTCATAAAAGGATGGACATCAATTCGAACTCCAACATCGAAGTACCAAT
CGAGATAGCTAAACAGTTGGGACTTCTAAAACCTCCAGGGGCCGGAGGAT
GTCCACCGTGTCCCAACCCTCCTTGTACTGGAGGTCCTGCAGGATGTGAT
GTCAAAGCTAAGTCTATTTCAGAAGTGCAGATCAATGGTAAAGGTGATTA
CAGTGCACCAGTGGGGCCAGTTTTCAGTGTTGGTGATGCTCCACCTCCTG
GTATTGTGCATCCAGAATTGTTAACACTGAATTTGAAAGGTAAAGATGGA
CGCATTGGAAAACCAGGACCCAAGGGACCACCAGGAGATGCTGGCCCACC
AGGCTCACAAGGTCCAATGGGTCCCAAAGGAGAACAAGGTGATGAATGTA
TTGCATCCAAGATGCCAAAAGATAAACAATGTTCACCAGACATCGTGAGC
AACCTTCGTGCAAGATTGGAGAAAGTGGAGAAATGTGCAACCaATACAAC
CTTGTTAGCAGCCATAACATTGAACGTATTGAGTACACTTGCAAATCAAA
GACACGAAAAACCTAAGTCCATTCTCGTCAAACAAAAACGCCCTCCACCT
CCACCACCGCCCGCTGCACCAGCCCCTCCTCCGCCTCCTGCTCAACCTGC
CGCTCCACCAGCACCCGCTAGTCCACCTTCACCTCCATCGCCACCCTCGG
GACAGCCAGCAACTGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATGT
GACGGAAATCAAGGCAATGCCAATGTCCAATCAGATGTCAAGATCGACCT
GACAGGAGGCGCTGACAAACAACAACCAGCTTGTAAACGATCTGGCACGT
GCGCAACCGATCCGTCTAAAACAGCCAATGCATTGCAAACACTACAACAG
CTTCTAAACCAAGCTAAagcacaacaacaacaaaatcctGTGGCCAAAGA
TTCTGCAACTGTCTTGGTGAATGGTGTACCGGTTAAAATACCGCTCGGGA
AATAAatggcggaaaaaGCGatgatttattttgtttttagcgTTTTCCTT
TCCTTTCCAGCACCAAGCTCCCAGaTGGCTAAAAGTCTCTTCATGCCACT
ATCGAGTCTACAAGATTTGGGATTCATTATCAAACCTCACAAAGATAATG
TCTACAACGACATTCATAAAAGGATGGACATCAATTCGAACTCCAACATC
GAAGTACCAATCGAGATAGCTAAACAGTTGGGACTTCTAAAACCTCCAGG
GGCCGGAGGATGTCCACCGTGTCCCAACCCTCCTTGTACTGGAGGTCCTG
CAGGATGTGATGTCAAAGCTAAGTCTATTTCAGAAGTGCAGATCAATGGT
AAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTTCAGTGTTGGTGATGC
TCCACCTCCTGGTATTGTGCATCCAGAATTGTTAACACTGAATTTGAAAG
GTAAAGATGGACGCATTGGAAAACCAGGACCCAAGGGACCACCAGGAGAT
GCTGGCCCACCAGGCTCACAAGGTCCAATGGGTCCCAAAGGAGAACAAGG
TGATGAATGTATTGCATCCAAGATGCCAAAAGATAAACAATGTTCACCAG
ACATCGTGAGCAACCTTCGTGCAAGATTGGAGAAAGTGGAGAAATGTGCA
ACCaATACAACCTTGTTAGCAGCCATAACATTGAACGTATTGAGTACACT
TGCAAATCAAAGACACGAAAAACCTAAGTCCATTCTCGTCAAACAAAAAC
GCCCTCCACCTCCACCACCGCCCGCTGCACCAGCCCCTCCTCCGCCTCCT
GCTCAACCTGCCGCTCCACCAGCACCCGCTAGTCCACCTTCACCTCCATC
GCCACCCTCGGGACAGCCAGCAACTGCTGCACCACCTTGTCCTGCAGGAC
CAGGGAAATGTGACGGAAATCAAGGCAATGCCAATGTCCAATCAGATGTC
AAGATCGACCTGACAGGAGGCGCTGACAAACAACAACCAGCTTGTAAACG
ATCTGGCACGTGCGCAACCGATCCGTCTAAAACAGCCAATGCATTGCAAA
CACTACAACAGCTTCTAAACCAAGCTAAagcacaacaacaacaaaatcct
GTGGCCAAAGATTCTGCAACTGTCTTGGTGAATGGTGTACCGGTTAAAAT
ACCGCTCGGGAAATAAatggcggaaaaaGCGatgatttattttgttttta
gcgTTTTCCTTTCCTTTCCAGCACCAAGCTCCCAGaTGGCTAAAAGTCTC
TTCATGCCACTATCGAGTCTACAAGATTTGGGATTCATTATCAAACCTCA
CAAAGATAATGTCTACAACGACATTCATAAAAGGATGGACATCAATTCGA
ACTCCAACATCGAAGTACCAATCGAGATAGCTAAACAGTTGGGACTTCTA
AAACCTCCAGGGGCCGGAGGATGTCCACCGTGTCCCAACCCTCCTTGTAC
TGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGTCTATTTCAGAAGTGC
AGATCAATGGTAAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTTCAGT
GTTGGTGATGCTCCACCTCCTGGTATTGTGCATCCAGAATTGTTAACACT
GAATTTGAAAGGTAAAGATGGACGCATTGGAAAACCAGGACCCAAGGGAC
CACCAGGAGATGCTGGCCCACCAGGCTCACAAGGTCCAATGGGTCCCAAA
GGAGAACAAGGTGATGAATGTATTGCATCCAAGATGCCAAAAGATAAACA
ATGTTCACCAGACATCGTGAGCAACCTTCGTGCAAGATTGGAGAAAGTGG
AGAAATGTGCAACCaATACAACCTTGTTAGCAGCCATAACATTGAACGTA
TTGAGTACACTTGCAAATCAAAGACACGAAAAACCTAAGTCCATTCTCGT
CAAACAAAAACGCCCTCCACCTCCACCACCGCCCGCTGCACCAGCCCCTC
CTCCGCCTCCTGCTCAACCTGCCGCTCCACCAGCACCCGCTAGTCCACCT
TCACCTCCATCGCCACCCTCGGGACAGCCAGCAACTGCTGCACCACCTTG
TCCTGCAGGACCAGGGAAATGTGACGGAAATCAAGGCAATGCCAATGTCC
AATCAGATGTCAAGATCGACCTGACAGGAGGCGCTGACAAACAACAACCA
GCTTGTAAACGATCTGGCACGTGCGCAACCGATCCGTCTAAAACAGCCAA
TGCATTGCAAACACTACAACAGCTTCTAAACCAAGCTAAagcacaacaac
aacaaaatcctGTGGCCAAAGATTCTGCAACTGTCTTGGTGAATGGTGTA
CCGGTTAAAATACCGCTCGGGAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:1137405..1140219 + |
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