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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:1046241..1049888- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11691.8.p1 ID=MSTRG.11691.8.p1|Name=MSTRG.11691.8.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3648bp|location=Sequence derived from alignment at sc0000085_pilon:1046241..1049888- (Clytia hemisphaerica_ch_hm2_pilon)
CACGTCATGAATGTTTTCAAATGAAAGTACTTATGGTAACATATCTTATC
ATCATTCTCACATTTTCATCAAATGTTATGTTAGATAATAATAATGTTCG
GGTTCTGTACGTCAACTATCTGCTTGTATGAGATAGATTCAATGGATTTA
CTTCGAGAAAGATGAAAATATCGTATTTGTTTCATATACTACTGATTTTG
TTTTTTGCTGTTTGCAACCATGATTGCCACCCGCAATGTCTCGATTATCT
GCCACCGTTTGAACCATCGAGTCCATTACAATTTTGTGTGAATTATCGAG
ATTATGGTTGTTGTGATAATCGTCTCGAAGAGCGAATTAAGTGGGATTAT
AAATACATGGCGAGAGATATGAACTCGAATGTATCCTTGAAAATACTAAA
GGATATACTCTGTTTACAATGCCATCCGTACGCAGCGCATGTCTTTGATG
CTGAAAGCGGAACAGACCGACATTCAACATTCCAGAAAAGTCATATGCGT
TTCCCGGGTCTTTGTAGGGATTATTGTTACAAACTTTTTGAGGAGCAAAG
GGATGTACTACTAAAACTGGCAATCAATAAGGATTTTGTTCAGTTCATAA
ACTCTACTAACGCAACAGAATTCTGTGATTGGGCTCAAATCGGTGACTTG
AACTATTGCTACCCTGATCTGGATAACACTACAGCCTCCAAAGAGTCAGT
TCAGATCTATCACAAAGATCAACTTTGCGTGGAGCCAATTTCAGGACCAC
ATTTTGCCAATGCGCTAGTAGCTGTTCACTCAAATGATCAATCACATCGT
TTATTCGTAGGAGAACAGCGTGGTCTTGTATTTGTTATTTTACCGAACGG
AACAAAGATTGAGAAACCTTTTTTGAACATCACGGATAAAATAGTAAATT
CTGGAGTACCGTGGGATGAACGTGGCTTCTTGGGCTTAGTTTTCCACCCT
GAATATAAAACAAATGGCAGGTTCTTTGTTTACTATTCAGCACCAGCGCA
AGGGCTGAACCGTGATGAATTCAGGTGTGTTTGATTGATCGATTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGATTGATTGAGTTTTGGATCGAAATGTCTTGGTTTACTGTTGACAACT
TTTATCATGTCGTGACCATATTGTCGGATAAAGCTTACTGTGTTCGGTAT
AAACAGTGTAGCTTTTTAAAAACCTCACGGTTGATGAAGCAAACACTTTA
AATCAAACATCCAAAGCTCTTACTCGTGGCCTAACCTTGATTCAAGACAC
GTTTTTAAAATTTTCTAATTTCAACGTATGTTTTAAAAACAGCGCTTTAG
CCCCGGTAGTACCTAGGCCAAAGAGATATGGGGATGTGCAAACCTTTTTT
ATGTTGAGAATGTCTGTCAGGTTTCCGTCAAAACAAGGCCAAAACTGCTT
GAACGTTGAGGCAGACTGGACACTACTTCAGGCGTACAAACTTTCGCGAG
CAGAAACTTTCGCGATTTTCGCGAAAGTAAATGCATTTGAAAATTCTTAA
CAAGGTGATTTGCGAAAGTTTATGCTCACGAAAAATTCTCTCAAAAGTTA
AAAATCTATCCAAAGCCTCCAAATCAAAATCAAAATTAGTAATTGTTGCG
TTTTTATGCCTTAAAAGCGTCATTGAATTCATATAGTGCCAGTTTTAATC
AAATCCAAGGAGTATTTACGTCACTTTTAAATTGTTTTTGGTGAAAATTC
TCATTTTGATCATCCAATTCGCGAAAGTTTTTGCTCATGGAAAATATCTT
TCCTCGAATTCGCGAAAGTAAATGCCGTAAATTTCGCGAATTCACGACCT
CGCGAAAGTTTGTACGCCTAAAGTAACCAAGATCTTTTTTTCTTTAGTCA
CTCAAAGTGGTATTGGGGAACGAAGCATCGAATACGAATCAGTGAATACA
CCGTTCATCCTGATCATCCAAATATGGCTGACCACAGCTCAGAGCTACCA
TTATTAGAAATCGACCAACCCGAACCTAACCATAATGGCGGTATGCTGTT
ATTCGGAACTGATGGATATTTATATGTTTTCGTGGGAGATGGCGGGGGTA
GTGGTGACCAGCACGGTATCCATGGCAACGGTCTGTTAATGTCAACCATG
TTGGGGAAAATCTTGAGAATAGACGTTAATGTAGAGCACAAGAAATACGG
CATTCCCAAAGATAACCCGTTTGTCAATTTTCGCAATGTGAAGGATGAGA
TTTATGCTCTTGGGATTCGAAACACGTGGCGATGTTCGGTTGATTTGAAA
GGGAATGGTAGAATGTTTTGTGGAGATGTCGGACAGAATCGCTTCGAAGA
AATTAACATCATTAAGAAAGGACGAAACTACGGTTGGAGAGCTTATGAAG
GTTTCTCTTGCTTCGATAAAGATCTTTGCCGAAGGGAGTTAAAAAACCTA
GAATTTCCCATCATCGCATATCCGCATTCAGTAGGACGTTCAATTGTTGG
AGGATATGTTTATCGGGGATGTCAAAATCCGAATATGTACGGAAAATACT
TCTTCGCTGATACAATGAACGGAAAGATATTCTCTGCTGAGGAGAATCCG
GGGACTGGAAAGTGGGATTATCGGGAAATCAAAATCGGAGATGAGAAATT
TTGTAATAACGGTTTTTCCAGTGTTTATCATAAGGCAATCTTATCTTTTG
GTGAATCTGAATCGGGCGAAATTTATCTTCTTAGTACACCGAATCCTCAT
CCTGATTTTGAAGGATCGGTTTTGTTTCGGCTCGTTGACCCATTGCGTCG
TAATGATCCAAAGCAATGTGTCACTCGTGTCATCGAGGCAAAACCAATAA
AAACGATCAAAAGACGTGCTATTTTCGAAAAATACCAAAAAGAGAAAGAC
AAAGTGATGAAATCAGGGGAAGGAGATGGGAAAGCAAAATGTCGTGACTC
GGGCAGCTTTTGTAAACATTACAGACCGACTAAAAGGAGAAAGAAGCCGT
TATTAAGTTGTTTGAAAACTAAACATTTAAGCAAACGATACTGTCCTGTG
ACATGCAATTTTTGTCCAAAGTAAGAAAACGACGAAATACCTTCTTTTTT
ATAATTTTCAGAAGATGAATTTGTAGTTTGTAGAGAATGTAATTAGGGTT
AAAAGCGTTGTCTAGGTTTTACCGTAACATTGGGATATAGTATTTGGTCA
CCTTTACTTACTCCACTATCAAAAGATATTCTAATATATATAACTCTTAT
AATCTTTTCCAAACATTTGCAATTTTGCAGCAGTTGAAAATTGAATTTTT
AAACCGTCTCCAATTTAGATCTCGGATGTACCTTATCGGGGAAAACTTCG
TCGGGGAAAATTTTCGTCGGGGAAAAATTCGTCACTTGTCCAAAATTTCG
TCACTTTTCCCCAACGAAGTTTTCCCCGATAAGGTATTGTCCAGTTTCTT
GGACAATGAAAAAATGTAGCAGGGCTTTTTGCTGACGTTTCATGTAAG Coding sequence (CDS) from alignment at sc0000085_pilon:1046241..1049888- >MSTRG.11691.8.p1 ID=MSTRG.11691.8.p1|Name=MSTRG.11691.8.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4080bp|location=Sequence derived from alignment at sc0000085_pilon:1046241..1049888- (Clytia hemisphaerica_ch_hm2_pilon)
TCACTCAAAGTGGTATTGGGGAACGAAGCATCGAATACGAATCAGTGAAT
ACACCGTTCATCCTGATCATCCAAATATGGCTGACCACAGCTCAGAGCTA
CCATTATTAGAAATCGACCAACCCGAACCTAACCATAATGGCGGTATGCT
GTTATTCGGAACTGATGGATATTTATATGTTTTCGTGGGAGATGGCGGGG
GTAGTGGTGACCAGCACGGTATCCATGGCAACGGTCTGTTAATGTCAACC
ATGTTGGGGAAAATCTTGAGAATAGACGTTAATGTAGAGCACAAGAAATA
CGGCATTCCCAAAGATAACCCGTTTGTCAATTTTCGCAATGTGAAGGATG
AGATTTATGCTCTTGGGATTCGAAACACGTGGCGATGTTCGGTTGATTTG
AAAGGGAATGGTAGAATGTTTTGTGGAGATGTCGGACAGAATCGCTTCGA
AGAAATTAACATCATTAAGAAAGGACGAAACTACGGTTGGAGAGCTTATG
AAGGTTTCTCTTGCTTCGATAAAGATCTTTGCCGAAGGGAGTTAAAAAAC
CTAGAATTTCCCATCATCGCATATCCGCATTCAGTAGGACGTTCAATTGT
TGGAGGATATGTTTATCGGGGATGTCAAAATCCGAATATGTACGGAAAAT
ACTTCTTCGCTGATACAATGAACGGAAAGATATTCTCTGCTGAGGAGAAT
CCGGGGACTGGAAAGTGGGATTATCGGGAAATCAAAATCGGAGATGAGAA
ATTTTGTAATAACGGTTTTTCCAGTGTTTATCATAAGGCAATCTTATCTT
TTGGTGAATCTGAATCGGGCGAAATTTATCTTCTTAGTACACCGAATCCT
CATCCTGATTTTGAAGGATCGGTTTTGTTTCGGCTCGTTGACCCATTGCG
TCGTAATGATCCAAAGCAATGTGTCACTCGTGTCATCGAGGCAAAACCAA
TAAAAACGATCAAAAGACGTGCTATTTTCGAAAAATACCAAAAAGAGAAA
GACAAAGTGATGAAATCAGGGGAAGGAGATGGGAAAGCAAAATGTCGTGA
CTCGGGCAGCTTTTGTAAACATTACAGACCGACTAAAAGGAGAAAGAAGC
CGTTATTAAGTTGTTTGAAAACTAAACATTTAAGCAAACGATACTGTCCT
GTGACATGCAATTTTTGTCCAAAGTAAATGAAAATATCGTATTTGTTTCA
TATACTACTGATTTTGTTTTTTGCTGTTTGCAACCATGATTGCCACCCGC
AATGTCTCGATTATCTGCCACCGTTTGAACCATCGAGTCCATTACAATTT
TGTGTGAATTATCGAGATTATGGTTGTTGTGATAATCGTCTCGAAGAGCG
AATTAAGTGGGATTATAAATACATGGCGAGAGATATGAACTCGAATGTAT
CCTTGAAAATACTAAAGGATATACTCTGTTTACAATGCCATCCGTACGCA
GCGCATGTCTTTGATGCTGAAAGCGGAACAGACCGACATTCAACATTCCA
GAAAAGTCATATGCGTTTCCCGGGTCTTTGTAGGGATTATTGTTACAAAC
TTTTTGAGGAGCAAAGGGATGTACTACTAAAACTGGCAATCAATAAGGAT
TTTGTTCAGTTCATAAACTCTACTAACGCAACAGAATTCTGTGATTGGGC
TCAAATCGGTGACTTGAACTATTGCTACCCTGATCTGGATAACACTACAG
CCTCCAAAGAGTCAGTTCAGATCTATCACAAAGATCAACTTTGCGTGGAG
CCAATTTCAGGACCACATTTTGCCAATGCGCTAGTAGCTGTTCACTCAAA
TGATCAATCACATCGTTTATTCGTAGGAGAACAGCGTGGTCTTGTATTTG
TTATTTTACCGAACGGAACAAAGATTGAGAAACCTTTTTTGAACATCACG
GATAAAATAGTAAATTCTGGAGTACCGTGGGATGAACGTGGCTTCTTGGG
CTTAGTTTTCCACCCTGAATATAAAACAAATGGCAGGTTCTTTGTTTACT
ATTCAGCACCAGCGCAAGGGCTGAACCGTGATGAATTCAGTCACTCAAAG
TGGTATTGGGGAACGAAGCATCGAATACGAATCAGTGAATACACCGTTCA
TCCTGATCATCCAAATATGGCTGACCACAGCTCAGAGCTACCATTATTAG
AAATCGACCAACCCGAACCTAACCATAATGGCGGTATGCTGTTATTCGGA
ACTGATGGATATTTATATGTTTTCGTGGGAGATGGCGGGGGTAGTGGTGA
CCAGCACGGTATCCATGGCAACGGTCTGTTAATGTCAACCATGTTGGGGA
AAATCTTGAGAATAGACGTTAATGTAGAGCACAAGAAATACGGCATTCCC
AAAGATAACCCGTTTGTCAATTTTCGCAATGTGAAGGATGAGATTTATGC
TCTTGGGATTCGAAACACGTGGCGATGTTCGGTTGATTTGAAAGGGAATG
GTAGAATGTTTTGTGGAGATGTCGGACAGAATCGCTTCGAAGAAATTAAC
ATCATTAAGAAAGGACGAAACTACGGTTGGAGAGCTTATGAAGGTTTCTC
TTGCTTCGATAAAGATCTTTGCCGAAGGGAGTTAAAAAACCTAGAATTTC
CCATCATCGCATATCCGCATTCAGTAGGACGTTCAATTGTTGGAGGATAT
GTTTATCGGGGATGTCAAAATCCGAATATGTACGGAAAATACTTCTTCGC
TGATACAATGAACGGAAAGATATTCTCTGCTGAGGAGAATCCGGGGACTG
GAAAGTGGGATTATCGGGAAATCAAAATCGGAGATGAGAAATTTTGTAAT
AACGGTTTTTCCAGTGTTTATCATAAGGCAATCTTATCTTTTGGTGAATC
TGAATCGGGCGAAATTTATCTTCTTAGTACACCGAATCCTCATCCTGATT
TTGAAGGATCGGTTTTGTTTCGGCTCGTTGACCCATTGCGTCGTAATGAT
CCAAAGCAATGTGTCACTCGTGTCATCGAGGCAAAACCAATAAAAACGAT
CAAAAGACGTGCTATTTTCGAAAAATACCAAAAAGAGAAAGACAAAGTGA
TGAAATCAGGGGAAGGAGATGGGAAAGCAAAATGTCGTGACTCGGGCAGC
TTTTGTAAACATTACAGACCGACTAAAAGGAGAAAGAAGCCGTTATTAAG
TTGTTTGAAAACTAAACATTTAAGCAAACGATACTGTCCTGTGACATGCA
ATTTTTGTCCAAAGTAAATGAAAATATCGTATTTGTTTCATATACTACTG
ATTTTGTTTTTTGCTGTTTGCAACCATGATTGCCACCCGCAATGTCTCGA
TTATCTGCCACCGTTTGAACCATCGAGTCCATTACAATTTTGTGTGAATT
ATCGAGATTATGGTTGTTGTGATAATCGTCTCGAAGAGCGAATTAAGTGG
GATTATAAATACATGGCGAGAGATATGAACTCGAATGTATCCTTGAAAAT
ACTAAAGGATATACTCTGTTTACAATGCCATCCGTACGCAGCGCATGTCT
TTGATGCTGAAAGCGGAACAGACCGACATTCAACATTCCAGAAAAGTCAT
ATGCGTTTCCCGGGTCTTTGTAGGGATTATTGTTACAAACTTTTTGAGGA
GCAAAGGGATGTACTACTAAAACTGGCAATCAATAAGGATTTTGTTCAGT
TCATAAACTCTACTAACGCAACAGAATTCTGTGATTGGGCTCAAATCGGT
GACTTGAACTATTGCTACCCTGATCTGGATAACACTACAGCCTCCAAAGA
GTCAGTTCAGATCTATCACAAAGATCAACTTTGCGTGGAGCCAATTTCAG
GACCACATTTTGCCAATGCGCTAGTAGCTGTTCACTCAAATGATCAATCA
CATCGTTTATTCGTAGGAGAACAGCGTGGTCTTGTATTTGTTATTTTACC
GAACGGAACAAAGATTGAGAAACCTTTTTTGAACATCACGGATAAAATAG
TAAATTCTGGAGTACCGTGGGATGAACGTGGCTTCTTGGGCTTAGTTTTC
CACCCTGAATATAAAACAAATGGCAGGTTCTTTGTTTACTATTCAGCACC
AGCGCAAGGGCTGAACCGTGATGAATTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:1046241..1049888 - |
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