|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:951540..955023+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11689.5.p2 ID=MSTRG.11689.5.p2|Name=MSTRG.11689.5.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3484bp|location=Sequence derived from alignment at sc0000085_pilon:951540..955023+ (Clytia hemisphaerica_ch_hm2_pilon)
taaaattttaaacatacaatcaaaacaaagacgTACATGCATTGGTTTTT
TGATACTGCACGAAATCCTTattttaaactcaaatcaaccTCCTGACAAA
CTATTCTAAATCACCACTGGCCTACAATTTTAGCGTGACAGacacaaaat
atgaaattcttTTAGTATATCTAGATTGTAACaaaaaaactcaatgaaaa
atcaaaaatggcaAGACTTAGTCTGAAGAGATGTATGATCGGCTTTAcat
taattttatgtttttggcTTGTATGGAAGGTCAAGTATAAAAATCAAGGA
TTCATGAAATATCTACCCAAAGTAAATTTCTCATCTGTTGTCACACCATA
TGAATATCAAATGAAAGGGGATTTTCTACCTCCTCACTTACGTAAACAAA
AACTTATCCTTTTCTTCACATCACATTTCTACAGTGACATCTGGAAAGGA
TTAGGTCCTGATGTATTACCTGGGTACACCCAAAATGCACATTGTAACAT
TAAAGAATGTTCAATGACTTATGACAAAAAGAGAATAAACGAGGCAGATC
TTGTGATATTTCATGGTGTAGATTTTGAATATAAGAATTATACTGATAAA
CATTTCCAAGCAATGTTAAAGAAGAAACCATCTCATCAACGATGGGTGTT
TTGGATGCATGAGACTCCTGTTTACTATCCAGAACCTGGaaattatgata
atttattCAATTGGACTATGACATTCAGTCAAGGGTCTGATATCTACCAC
CCATATTACTCTTACAGAAGGCTAACTGCTGATGATGACAGACCTGGAAA
GTACATGAACTATGCTCTTGGAAGAACAAAGAAAATAGCCTGGATGGTAA
GTCATTGTGGTATGACAAGAGGTGAATATGTTATGGAACTGCAAAAGTAT
ACTGATGTTACTGTTTATGGTTTGTGTGGGGCATCTTATGATAATATGGC
AGGCATATGTTCTCGTGTTGAAAGTGAGTGTATGGATCAATTGAATCAAT
ATCgattttatcttgcttttgaAAACTCATTTTGTGAAGACTATGTGACA
GAAAAGTATTATAAATTTGGCATAATGTATGGTGCTGTACCAATAGTGAT
GGGCGCTAGATACAATGCATTGAATTCTATACCAGGGTCTTACATTGATG
CTTCCACATTTCCTTCAGTACAAGCTTTAGGAGAATACATTAATTTCCTC
AGTGAAAATGATTATTACTACAATCAATATTTTGAGTGGAAAAATCACTT
CAAAATGGACGATGGAATTGATAAGATTTGTTTACTTTGTCATGCAGCTC
ATGATGTAACTAGAAAGTCTAGTTTCCATAAACATTTCCATGCTTTTTGG
AGCAAACAAGCAATGTGTGATCCCTATGAACCTGTCATTCAAAAGTTTGG
TCACCAAATTGAACAGTCCAAACTTTCTAGAATAGGCGAAGGTACAAAAT
CATAGACCtattttataattaaaacattatctttttttataaccattttt
accttttgcactttattttttagaactttaATCAATACTAAATTTAATAG
TTATATCAAGTAAAATTACACATCTAGAATTTCTGCCTTGtgtctttttt
ttcactttgcagtaggtttctttttctttaaggtAGGCAATATTTCCAAT
TGGTCTTCTTGATAGTATTGTATTCTTTCCTCTTTAATAGATGAATAGTA
AAGATAATTAAatggatatttcaaaaataagaaatagtTTCCAGCTGAAA
TTTGGTTTGCATTTTATTTCAAGAACTATAGTAAAAGGTAAtacatttca
ttgaaaaatcatattgCTTCAACCAGAAGGCATTACGCAGCTAATACCTA
AACTCGTTACACTGGTGGTGAAATGTATAATctgtaaaaatcataaaatt
gttAATAAAAATAGAATGTTTTAAAGAAAGTTACTTGAAACAGAAACCAA
AGATTCATTCTTACCTATGTATCCTATATACTTATTAAAGAGCTGTGAAT
TAACCATTCAATTGGAGTGTTTACTCTTTTGTTAGTACTGAACACAGTTG
ATGGTCATATTTGTAAAATTGGTTACTCACCATTTATCATAGTTGGACAT
CAACCAACGGGAtcacttctttatttaattattcgactagaagaacaatg
ttaacaatattttctttattaatAGAATATTGCAGAAAAATGAGCAATTA
CATGAACTATTCTGAAGCTTCAAAGCTTTATGATGAAGCACGAGTTGCAG
CAGATGCTGAAAACATTTACAACATTTTCACTGGGCTTCTCAAGAAACCA
GCAAACAAAGTATTTCATTTATCAGCATTTATCAATGATTTCTTATGTTT
GTACATTGAGCCGGTTTGTTAACAACCTCATTTCCTGCGTATtagctttt
tatgattttttatcaaagtaTTGTTTTGCATGAGCTTCTTCAAAAACTTC
ttaaataatcaaaaataaatattatggtgtattttattgtaattttattg
caatttttctttaatttttagatcgatcttttGGATATTGGATGTGGTAC
AGGCAACTACAGTTATTCTTTCATGAAAAATGGTTTACAAAGCATTACCA
TTGCTGATGCTTCTCAGGAGATGTTAAACTgtgccaaaatcaaaatgaaa
gtaTTTGAAGATAAAGTCACTGCACAAGATATCATTTTACCAAACTTACC
ATTTCCTGAGAAAAGCTTTGATGTTATTTCTTGCATGCAGGTTTTACACC
ATATTGATTCTGCTGCTTTGAAAGAATCAACCAAGGAACATCTTCAACGG
GAAGACTATCCAAACATGCTTGAAACCTTGGGTCAAGCTTACAATGTTTT
AAAACCTGGTGGGGTACTAGTTATTGATGTTATGTTTGAAGAAAATTGTG
AAAGTTTTTGGTGGACCAGATTATGTCCAATAGCTGCTAAGGCGTTCAAA
AGACTAAGAATGAGCCAAAAGGACATGATTCAGTCCTTAGAGAAACTTAA
TTTTGAGAATATTGTTTGCACATACTTTCCAGGCTCTCGCTTAGTTAAAA
AGGAGATTTATGATGAAATTCAATGTATAGATGATCCTAAATGGAGATAT
TATCTTTCTCAGTACAAATTGGTTGAAAAGTCTGGTGAATTAGATAACCT
AATTAAAATTGTAAAAGACGCAGAGACTTCTGGAAAACTGAAAGAGTATT
TTGACGATTGGAGTGAAAAGCTCTGGACACATGGGAATCATAGTGCTGtt
tttgcaatgaagcctttagcatagatttttgtttaatttttattaagttt
gatttttcataaatttttcaattacTGGTAAAACTGGTAAAAGACTTATT
TATAAATTATTAACTAGGTTGAGGGCTAGAAGGTTTATAAGGGTTTTTAT
AcgtttagaattttttataaagGTCATTTAAATACATACACAtgtttttt
ctgggaaaaatcAATGTATCTACTAATTCAAGAG Coding sequence (CDS) from alignment at sc0000085_pilon:951540..955023+ >MSTRG.11689.5.p2 ID=MSTRG.11689.5.p2|Name=MSTRG.11689.5.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000085_pilon:951540..955023+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCAATTACATGAACTATTCTGAAGCTTCAAAGCTTTATGATGAAGC
ACGAGTTGCAGCAGATGCTGAAAACATTTACAACATTTTCACTGGGCTTC
TCAAGAAACCAGCAAACAAAatcgatcttttGGATATTGGATGTGGTACA
GGCAACTACAGTTATTCTTTCATGAAAAATGGTTTACAAAGCATTACCAT
TGCTGATGCTTCTCAGGAGATGTTAAACTgtgccaaaatcaaaatgaaag
taTTTGAAGATAAAGTCACTGCACAAGATATCATTTTACCAAACTTACCA
TTTCCTGAGAAAAGCTTTGATGTTATTTCTTGCATGCAGGTTTTACACCA
TATTGATTCTGCTGCTTTGAAAGAATCAACCAAGGAACATCTTCAACGGG
AAGACTATCCAAACATGCTTGAAACCTTGGGTCAAGCTTACAATGTTTTA
AAACCTGGTGGGGTACTAGTTATTGATGTTATGTTTGAAGAAAATTGTGA
AAGTTTTTGGTGGACCAGATTATGTCCAATAGCTGCTAAGGCGTTCAAAA
GACTAAGAATGAGCCAAAAGGACATGATTCAGTCCTTAGAGAAACTTAAT
TTTGAGAATATTGTTTGCACATACTTTCCAGGCTCTCGCTTAGTTAAAAA
GGAGATTTATGATGAAATTCAATGTATAGATGATCCTAAATGGAGATATT
ATCTTTCTCAGTACAAATTGGTTGAAAAGTCTGGTGAATTAGATAACCTA
ATTAAAATTGTAAAAGACGCAGAGACTTCTGGAAAACTGAAAGAGTATTT
TGACGATTGGAGTGAAAAGCTCTGGACACATGGGAATCATAGTGCTGttt
ttgcaatgaagcctttagcatagATGAGCAATTACATGAACTATTCTGAA
GCTTCAAAGCTTTATGATGAAGCACGAGTTGCAGCAGATGCTGAAAACAT
TTACAACATTTTCACTGGGCTTCTCAAGAAACCAGCAAACAAAatcgatc
ttttGGATATTGGATGTGGTACAGGCAACTACAGTTATTCTTTCATGAAA
AATGGTTTACAAAGCATTACCATTGCTGATGCTTCTCAGGAGATGTTAAA
CTgtgccaaaatcaaaatgaaagtaTTTGAAGATAAAGTCACTGCACAAG
ATATCATTTTACCAAACTTACCATTTCCTGAGAAAAGCTTTGATGTTATT
TCTTGCATGCAGGTTTTACACCATATTGATTCTGCTGCTTTGAAAGAATC
AACCAAGGAACATCTTCAACGGGAAGACTATCCAAACATGCTTGAAACCT
TGGGTCAAGCTTACAATGTTTTAAAACCTGGTGGGGTACTAGTTATTGAT
GTTATGTTTGAAGAAAATTGTGAAAGTTTTTGGTGGACCAGATTATGTCC
AATAGCTGCTAAGGCGTTCAAAAGACTAAGAATGAGCCAAAAGGACATGA
TTCAGTCCTTAGAGAAACTTAATTTTGAGAATATTGTTTGCACATACTTT
CCAGGCTCTCGCTTAGTTAAAAAGGAGATTTATGATGAAATTCAATGTAT
AGATGATCCTAAATGGAGATATTATCTTTCTCAGTACAAATTGGTTGAAA
AGTCTGGTGAATTAGATAACCTAATTAAAATTGTAAAAGACGCAGAGACT
TCTGGAAAACTGAAAGAGTATTTTGACGATTGGAGTGAAAAGCTCTGGAC
ACATGGGAATCATAGTGCTGtttttgcaatgaagcctttagcatag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:951540..955023 + |
|
