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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:949181..955023+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11689.1.p1 ID=MSTRG.11689.1.p1|Name=MSTRG.11689.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5843bp|location=Sequence derived from alignment at sc0000085_pilon:949181..955023+ (Clytia hemisphaerica_ch_hm2_pilon)
ataaataaaattctaaaagCACATGTTTTCacgtgttttcaaaaaaaaag
aagaacagtCGAGGTGACAGTGACAGGAATTTTCACAGTGACAGGGCAGC
AGTGCTGACAGCTTAACAGTTACCTGTTAATCAATCAGTAGTAACAAGAC
TAGTAGGGGTAAGTCGGAAAATCTGTATTTAGTTACTCCTTTGGATTTTA
CTAGTTTTTCTGAAGAGTATGCTATACTTATAATTATCCAGCAGACTTTT
GTCCCTCCTCGTAACAAATCATCTATTTTGGCACAAAATGCTACTCTAGG
GATCCTGCAAGTGTGATGATCTGATTTGTTTCTTTATTCAGTTCAgccaa
aacatttaaaaccttGAAACTCAAGTTCATGATTTAATCGGGaataaaat
atactgtaattaaaaaatataataaaatccCATTCCTCACACTCTTTTAG
CCATCTTTACCacatatttttttgttcttgttattattgtttttctttat
atacTCAAGTTATTTGATTCAGTCGCATTTAGTCGTAGCATATGCGTATA
TCTTACTTATACTAAAGTTCTGGCTGGGGGGAACAGCAGTCTGttctcta
aagaatcctgcattgtaacatgCATGCATAATTTTTCATTCTTAAACCAT
ATGCAGTTAATTCccatgataaacaaagaggaatgaacaGTGGTACAGTT
GTTACTTTTGGTTTgggttgtggacggcaaaatttgtcgttctttatgaa
atttatcgttctttttgtctatttttagtaatccaggattctttagataa
accccctcacAACTCGGAGGACAAAAACCTgacaaaacatacaaaaaact
GTTCTATAGAGTTCagccagtatggattccacgaaatcttgcgccgaaga
tatttttccgtgcagcaagcctcacgccaagcaaaatttcttttgtacca
acattcaatttttcaataagggtgcaagatgggaaaagaggcgcatgcgc
caacataaTAATAAATTGACGTGAGCGCAAGCgagcgaaagcaaatttag
ccaaatggaagctaaaaatcgatggattatggagtcattcacgccgagct
ggaatCATTACTatacgccaactgaaaatcaaacaatctttgtaagtacc
cttacgccaatgcgctaaaaacgtttcagttgtacgccgaagaacttcgg
cgttagttacacgaaatccatactgggAGTTCAGTTGAAAAAATTTGTGT
CTTTTAGAGGATGTTTTGCCCCTTTGTCCAAATaggcaggctagctctaa
agctctaaaacagcatctcaTAACATGAAAACTAGAATAttattcttcaa
tgggaatcagaactataaagtgcacttacaaacatgaatatgtcagatct
aataaaattaataacggcacgcactgtcatcattgacaatagaccttttt
tcaaagaggccaccctgttgaataattatgtagtccagcagaaaaacaat
gataaaaccatgcataattattacaatatgcatgatacagtaattatgca
tggctctatcattgcttttatggctggactacataattattcaacaggac
gtcctctttgaaaaaaggtctataaaacaaacaattttctatcaagagtc
ttgtaaacattccaacaacttccattgaaatgatcTGTCACTGCATCTGT
CATTTTTAGCgcagtccgaggattgagccgagaatgcCCGCAGAACGCCC
ATTAGCTCCCGCAAGGATGataaactttaatctgtcaatcattttctcaa
gcaaagagtatGCAAAGAGaatctagctttacgatagtgccgcggatcat
cagtggatagtattcaattatcatcatCCCTTtcttttcattcctagaac
ttttacaaaaaaaggaaaaatagaaaagttgtattttttactgctttaTT
CGCatgctgaatttgaaagatcttctatactatgtggcgtttttttgcaa
acttcaaaaaactgatttttgtcccgcttttgcgggactttagcttaagt
gcttgcatGCAGCAAGCAACAATTTTTGTATATATGAAGAGTTAGGGCTA
TACTGATAGGGTTGAGACATGACATAACACTACCTGACAACCTTGCCAAC
TTGAGATGTTTATATCCTtgagataaaaaatttcaagtgaAATCCGAAAT
CTTAGCCTAGTTTTTCCGACGACGttgtatattttgaaaattgacctCAG
AATTATTTTTGTTAGAAATTCTGTACTCTTCAAACATCAAGTTCCCTTTT
TAGACGGGGGTTTTATGGAGATATGGTGTTAATTTTCTTACTCAATTATG
GatggaaaataaaattttaaacatacaatcaaaacaaagacgTACATGCA
TTGGTTTTTTGATACTGCACGAAATCCTTattttaaactcaaatcaaccT
CCTGACAAACTATTCTAAATCACCACTGGCCTACAATTTTAGCGTGACAG
acacaaaatatgaaattcttTTAGTATATCTAGATTGTAACaaaaaaact
caatgaaaaatcaaaaatggcaAGACTTAGTCTGAAGAGATGTATGATCG
GCTTTAcattaattttatgtttttggcTTGTATGGAAGGTCAAGTATAAA
AATCAAGGATTCATGAAATATCTACCCAAAGTAAATTTCTCATCTGTTGT
CACACCATATGAATATCAAATGAAAGGGGATTTTCTACCTCCTCACTTAC
GTAAACAAAAACTTATCCTTTTCTTCACATCACATTTCTACAGTGACATC
TGGAAAGGATTAGGTCCTGATGTATTACCTGGGTACACCCAAAATGCACA
TTGTAACATTAAAGAATGTTCAATGACTTATGACAAAAAGAGAATAAACG
AGGCAGATCTTGTGATATTTCATGGTGTAGATTTTGAATATAAGAATTAT
ACTGATAAACATTTCCAAGCAATGTTAAAGAAGAAACCATCTCATCAACG
ATGGGTGTTTTGGATGCATGAGACTCCTGTTTACTATCCAGAACCTGGaa
attatgataatttattCAATTGGACTATGACATTCAGTCAAGGGTCTGAT
ATCTACCACCCATATTACTCTTACAGAAGGCTAACTGCTGATGATGACAG
ACCTGGAAAGTACATGAACTATGCTCTTGGAAGAACAAAGAAAATAGCCT
GGATGGTAAGTCATTGTGGTATGACAAGAGGTGAATATGTTATGGAACTG
CAAAAGTATACTGATGTTACTGTTTATGGTTTGTGTGGGGCATCTTATGA
TAATATGGCAGGCATATGTTCTCGTGTTGAAAGTGAGTGTATGGATCAAT
TGAATCAATATCgattttatcttgcttttgaAAACTCATTTTGTGAAGAC
TATGTGACAGAAAAGTATTATAAATTTGGCATAATGTATGGTGCTGTACC
AATAGTGATGGGCGCTAGATACAATGCATTGAATTCTATACCAGGGTCTT
ACATTGATGCTTCCACATTTCCTTCAGTACAAGCTTTAGGAGAATACATT
AATTTCCTCAGTGAAAATGATTATTACTACAATCAATATTTTGAGTGGAA
AAATCACTTCAAAATGGACGATGGAATTGATAAGATTTGTTTACTTTGTC
ATGCAGCTCATGATGTAACTAGAAAGTCTAGTTTCCATAAACATTTCCAT
GCTTTTTGGAGCAAACAAGCAATGTGTGATCCCTATGAACCTGTCATTCA
AAAGTTTGGTCACCAAATTGAACAGTCCAAACTTTCTAGAATAGGCGAAG
GTACAAAATCATAGACCtattttataattaaaacattatctttttttata
accatttttaccttttgcactttattttttagaactttaATCAATACTAA
ATTTAATAGTTATATCAAGTAAAATTACACATCTAGAATTTCTGCCTTGt
gtcttttttttcactttgcagtaggtttctttttctttaaggtAGGCAAT
ATTTCCAATTGGTCTTCTTGATAGTATTGTATTCTTTCCTCTTTAATAGA
TGAATAGTAAAGATAATTAAatggatatttcaaaaataagaaatagtTTC
CAGCTGAAATTTGGTTTGCATTTTATTTCAAGAACTATAGTAAAAGGTAA
tacatttcattgaaaaatcatattgCTTCAACCAGAAGGCATTACGCAGC
TAATACCTAAACTCGTTACACTGGTGGTGAAATGTATAATctgtaaaaat
cataaaattgttAATAAAAATAGAATGTTTTAAAGAAAGTTACTTGAAAC
AGAAACCAAAGATTCATTCTTACCTATGTATCCTATATACTTATTAAAGA
GCTGTGAATTAACCATTCAATTGGAGTGTTTACTCTTTTGTTAGTACTGA
ACACAGTTGATGGTCATATTTGTAAAATTGGTTACTCACCATTTATCATA
GTTGGACATCAACCAACGGGAtcacttctttatttaattattcgactaga
agaacaatgttaacaatattttctttattaatAGAATATTGCAGAAAAAT
GAGCAATTACATGAACTATTCTGAAGCTTCAAAGCTTTATGATGAAGCAC
GAGTTGCAGCAGATGCTGAAAACATTTACAACATTTTCACTGGGCTTCTC
AAGAAACCAGCAAACAAAGTATTTCATTTATCAGCATTTATCAATGATTT
CTTATGTTTGTACATTGAGCCGGTTTGTTAACAACCTCATTTCCTGCGTA
TtagctttttatgattttttatcaaagtaTTGTTTTGCATGAGCTTCTTC
AAAAACTTCttaaataatcaaaaataaatattatggtgtattttattgta
attttattgcaatttttctttaatttttagatcgatcttttGGATATTGG
ATGTGGTACAGGCAACTACAGTTATTCTTTCATGAAAAATGGTTTACAAA
GCATTACCATTGCTGATGCTTCTCAGGAGATGTTAAACTgtgccaaaatc
aaaatgaaagtaTTTGAAGATAAAGTCACTGCACAAGATATCATTTTACC
AAACTTACCATTTCCTGAGAAAAGCTTTGATGTTATTTCTTGCATGCAGG
TTTTACACCATATTGATTCTGCTGCTTTGAAAGAATCAACCAAGGAACAT
CTTCAACGGGAAGACTATCCAAACATGCTTGAAACCTTGGGTCAAGCTTA
CAATGTTTTAAAACCTGGTGGGGTACTAGTTATTGATGTTATGTTTGAAG
AAAATTGTGAAAGTTTTTGGTGGACCAGATTATGTCCAATAGCTGCTAAG
GCGTTCAAAAGACTAAGAATGAGCCAAAAGGACATGATTCAGTCCTTAGA
GAAACTTAATTTTGAGAATATTGTTTGCACATACTTTCCAGGCTCTCGCT
TAGTTAAAAAGGAGATTTATGATGAAATTCAATGTATAGATGATCCTAAA
TGGAGATATTATCTTTCTCAGTACAAATTGGTTGAAAAGTCTGGTGAATT
AGATAACCTAATTAAAATTGTAAAAGACGCAGAGACTTCTGGAAAACTGA
AAGAGTATTTTGACGATTGGAGTGAAAAGCTCTGGACACATGGGAATCAT
AGTGCTGtttttgcaatgaagcctttagcatagatttttgtttaattttt
attaagtttgatttttcataaatttttcaattacTGGTAAAACTGGTAAA
AGACTTATTTATAAATTATTAACTAGGTTGAGGGCTAGAAGGTTTATAAG
GGTTTTTATAcgtttagaattttttataaagGTCATTTAAATACATACAC
AtgttttttctgggaaaaatcAATGTATCTACTAATTCAAGAG Coding sequence (CDS) from alignment at sc0000085_pilon:949181..955023+ >MSTRG.11689.1.p1 ID=MSTRG.11689.1.p1|Name=MSTRG.11689.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000085_pilon:949181..955023+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCAATTACATGAACTATTCTGAAGCTTCAAAGCTTTATGATGAAGC
ACGAGTTGCAGCAGATGCTGAAAACATTTACAACATTTTCACTGGGCTTC
TCAAGAAACCAGCAAACAAAatcgatcttttGGATATTGGATGTGGTACA
GGCAACTACAGTTATTCTTTCATGAAAAATGGTTTACAAAGCATTACCAT
TGCTGATGCTTCTCAGGAGATGTTAAACTgtgccaaaatcaaaatgaaag
taTTTGAAGATAAAGTCACTGCACAAGATATCATTTTACCAAACTTACCA
TTTCCTGAGAAAAGCTTTGATGTTATTTCTTGCATGCAGGTTTTACACCA
TATTGATTCTGCTGCTTTGAAAGAATCAACCAAGGAACATCTTCAACGGG
AAGACTATCCAAACATGCTTGAAACCTTGGGTCAAGCTTACAATGTTTTA
AAACCTGGTGGGGTACTAGTTATTGATGTTATGTTTGAAGAAAATTGTGA
AAGTTTTTGGTGGACCAGATTATGTCCAATAGCTGCTAAGGCGTTCAAAA
GACTAAGAATGAGCCAAAAGGACATGATTCAGTCCTTAGAGAAACTTAAT
TTTGAGAATATTGTTTGCACATACTTTCCAGGCTCTCGCTTAGTTAAAAA
GGAGATTTATGATGAAATTCAATGTATAGATGATCCTAAATGGAGATATT
ATCTTTCTCAGTACAAATTGGTTGAAAAGTCTGGTGAATTAGATAACCTA
ATTAAAATTGTAAAAGACGCAGAGACTTCTGGAAAACTGAAAGAGTATTT
TGACGATTGGAGTGAAAAGCTCTGGACACATGGGAATCATAGTGCTGttt
ttgcaatgaagcctttagcatagATGAGCAATTACATGAACTATTCTGAA
GCTTCAAAGCTTTATGATGAAGCACGAGTTGCAGCAGATGCTGAAAACAT
TTACAACATTTTCACTGGGCTTCTCAAGAAACCAGCAAACAAAatcgatc
ttttGGATATTGGATGTGGTACAGGCAACTACAGTTATTCTTTCATGAAA
AATGGTTTACAAAGCATTACCATTGCTGATGCTTCTCAGGAGATGTTAAA
CTgtgccaaaatcaaaatgaaagtaTTTGAAGATAAAGTCACTGCACAAG
ATATCATTTTACCAAACTTACCATTTCCTGAGAAAAGCTTTGATGTTATT
TCTTGCATGCAGGTTTTACACCATATTGATTCTGCTGCTTTGAAAGAATC
AACCAAGGAACATCTTCAACGGGAAGACTATCCAAACATGCTTGAAACCT
TGGGTCAAGCTTACAATGTTTTAAAACCTGGTGGGGTACTAGTTATTGAT
GTTATGTTTGAAGAAAATTGTGAAAGTTTTTGGTGGACCAGATTATGTCC
AATAGCTGCTAAGGCGTTCAAAAGACTAAGAATGAGCCAAAAGGACATGA
TTCAGTCCTTAGAGAAACTTAATTTTGAGAATATTGTTTGCACATACTTT
CCAGGCTCTCGCTTAGTTAAAAAGGAGATTTATGATGAAATTCAATGTAT
AGATGATCCTAAATGGAGATATTATCTTTCTCAGTACAAATTGGTTGAAA
AGTCTGGTGAATTAGATAACCTAATTAAAATTGTAAAAGACGCAGAGACT
TCTGGAAAACTGAAAGAGTATTTTGACGATTGGAGTGAAAAGCTCTGGAC
ACATGGGAATCATAGTGCTGtttttgcaatgaagcctttagcatag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000085_pilon | genome | sc0000085_pilon:949181..955023 + |
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