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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:926511..930305+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11687.4.p1 ID=MSTRG.11687.4.p1|Name=MSTRG.11687.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3795bp|location=Sequence derived from alignment at sc0000085_pilon:926511..930305+ (Clytia hemisphaerica_ch_hm2_pilon)
TATAAATGCGAGGGAGTTGTCTAAGAATTTAGTGGAAATACTGGAATAAT
TCTGTTTATTGACTAGCGCTTCTGAGGCTTGTATACAGTAGATGACAGGG
CCGGTCGTTAATATTGCTAGCTACTATTTCAAAGGCAATAAGATGAACTC
TATTTTCTTACATGAAATGTCAGAATATTTTGACCACATGCTTCCAGGAA
ATGTATGTTTTTGGAATTGATATTTAGGTAACTATGGTAAAAAGTTTCGC
CATTCAACTGTTTTGTTTACAAtgttttgtctttatttttggaaaagaag
gTTTTACTATCTTGAAAACTTTCTTCTAATTCTGGACCCAATTTAATTCA
CACTTATGAATCTTCAATGAAATTCCCTGGGATTTGTTTACAACTTTCAC
CGTCGAAGTGAGGGAAAACAGTGAAGTAGGCAAAAATAGGATGGAAACTT
AACAAGTGAATGGTGAATAGGAATGATAACTTGtttgtgaaatatttcaa
aatggcgtGGCCTTTTTTATCTAATTTACTTCGATTATTGTtgaatattt
attcaatatttccTCGTTGGGATATTCACTAGAGATTTGGGCAAAAATTG
TCACCTTGAATATATTGGTGCTATAAATTGGGAGGAGGGGGTAATTTTTT
GggacaaaaagtaatgaatatttCATGAATCAGAGCTATACTGAACATTA
GCTTTGTCTATAGAAATTACACGAGTTAGTATCACGTTTGCTCTGAACAG
TTATGCTGCAATAAAGGAAGAGATTGGCTTTAAATCTTTCCTTCTCTATT
TCAATGGAGTCAGCATTATTTTGTCATAGCGGCGCCTTTTACTCTGATGA
CGAATCAATAAGCAAAAAAGAGAGGATTAAGAGAAAGACTTTAGGCTATA
ATTTATAAGctctctttcatttttatcataaaCTTTATCGTTTGGGAAGT
GAATATTTCTATTAACAATCTTGTGGTGTAGACAAGACAAGAGCAAGTCT
GCTAgagcattttttttcattaattttgaatatttttcaatattttcttc
aaaagctTCATGATGGAGTTGATGAAAAGGAAAAGTTTCCAATTTTGGCC
AATTCTTATCGATGAAAAGTGAATATTTAGATAACAAAAGGATAACGATT
GACTGTCTAGAGTTTTTATCGTTGATATAGTTTAAGTTCTATGTGGTAGA
TTTGGAGTGATGGTAAACTGTAGTATAGTTTCAGGGCTCTCATTCACCAG
AAATCTCGGTATCAAGGGCAAAGAATATGGTTCTTGGGGATGCTGTACGA
GGTTTAAGATTTCGATTTCCTTAACAAAACGTTTTCACCTTTTTCCCATA
GGAAAGTAGAAATAACCACCAACAACAAAGCAGCAATACAACCGACTCAC
CGGCAAACAATACTTCCACAACCTCCTCAGCCAATAACAATAAAGCCACC
ATGAAGATGAAAGAGCACAaagattttgataatattcacATTGCATTGGC
TGGTGCAAAGAATTGTGGGAAATCAGGTAAGCGCCGAGAAATAgtctttg
atttaaaaaaaattctaagaaacATTCACATAATTATAAAAGGTTAAATC
TAGACTTGAAACTACAAGGCGCTCTATTTCAAGGAATAGGAATTTGGACA
ATTTACTTCACTTTACACATCTTCTTTGGATGACAATCACCAAAATTTCC
CAATAATCCATTTAAACTTACGTAAATGCCTGTATTACTTGTATTACTAT
GAAATTCTCCCTTTACTTGCAGCACTGGCGGTTCGTTATTTGACCAAACG
TTTCATTGGAGAGTACGATTCACACAAAGGTGAGTGAAATAaagagtttt
ttttgtttttttttaatctatatataggtaacacgaacaaatagtacaaa
actaaaggtTCCTAGCCTCctgcaaaaggaccaccagatcataccgccag
gaggtaggaacccaaactaagctaacaataaacTAATAAATGGACTaata
aatggagaaaaaaaactaactacagagaggataaatactaacagaaatga
aaaacaaaaactaaaagagctaggagagcagttggagtaaaatactaaaa
ttacggtcccccaaaacggcttgtatcacagataaattttatcattataC
TCAATATATCATGAAAGAGTTTTGATGACCAAAGAACATTCTTGGCAACT
TGTTGAATTGGAAAGCCTTTAGGACCTGTTATTTTGATAAGTGACATTac
tcgtttttttataagaaaaaactatataagaacataattcttcgatggcc
aaaatgttaagagcatttGAACGCTTTGGGGACTTTAAACACCCGATTTC
Atatgaaaatggacaaaaaatattcacaaaatggggaaaataagaattat
gtttttagacatttttaggcttaataactcaaaaagttaagaacatctga
aggcttcaaaaattttgtatgttcttatataaaaaagatgtATGGTTTTT
ACTCATGTCAGAAGAGAAATCAACTCATTTTACATTAATTATAACGTTTT
CGAGTGATGAAAATACACGGTAGCATCAAAAGTATATTAGAGattataat
tttgaattttttcttttggtcttgtTTAAGATGACATATGGCATCGAAGT
ATGACAGTTGCTGACAGAGAAGTTCGTGTATCACTCAAAGATACCACTGG
AACGGTACGTTGGTTCActctttcattcattcattcattcattcattcat
tcattcattcattcattcattctattgaaaacaaaagtagTCCCCGAATG
TGAGAAGAGAAAACAAAACTGTTTTAATAGAGACAAAAATTCGTAGCCTC
AGTGATCAGCAAAGGTTTCAAATACGAGCCACTCAATAAGAAATTCTCCT
ATCTCTCATGAACCtttttttCTATCATTTACAGAGCTGGTTAAAAACAC
CCGCACCTTTAATCAGTTGGACCACAGCAATCGTAGTTGTCTACTCCATC
ACAGATCGAAACAGTTTCGCATTGGCACGACACATCCTCGAAATCATCGA
CAAGATAAAACCTCTCAGTTCACGGTGTACTCTTTTAATCGGAAATAAAT
GCGATCTAATGCATCTCAGACAGGTCCCTAAAAGTGATGCTAAAAAACTA
GCCGATGATTTCGGCGTACACTTCTTAGAGTGTTCAGCGGCAGAAAATTA
TGATGATATATTCAGCTCATTTACAAGACTCTTAGTGGAAGCTATGATTG
CACAAAGTGCTAAGAAACATTCATGGGACGATCAGAACGCTGATGATGTT
AAACAGAACGAGAATCGATTACGTAAACGTTCCCTTTCGACGGGACAAGC
ACCTAGTAAAGACAGTAACAACAATACGTCATTCCTTGGCGGATTACGTG
AAAAGAAAGACTCTATGATTAAAATTGATGAACGTATACCAAGCCCCGTT
GAACAGCGTGATACGCCTGCGCCGCAACGTAAGCAATCACTACGGCGTAA
AATATCCGGCATAGGATCAAAACTTGTAGGCTCTGGTCAGAGCAATAGGT
GACCTCTTTAAGACGTTActacagtttttatttttaatattttctttttt
ttgtaaataattcgAGGACAGGGTTTAACTTAAAACTAagcaattttttt
attagagaATTTTGAGCCCCTTAAATTTACTGTAAATAATCCAAAGTGTG
AATATGACAGATTAACAAATATAAATGCTTAAAACATTTATCTTCTTCAT
ACCATGTCCCCTGATAACACCCCGACCCTACTATGCTCAACCAGC Coding sequence (CDS) from alignment at sc0000085_pilon:926511..930305+ >MSTRG.11687.4.p1 ID=MSTRG.11687.4.p1|Name=MSTRG.11687.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3300bp|location=Sequence derived from alignment at sc0000085_pilon:926511..930305+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATGAAAGAGCACAaagattttgataatattcacATTGCATTGGC
TGGTGCAAAGAATTGTGGGAAATCAGCACTGGCGGTTCGTTATTTGACCA
AACGTTTCATTGGAGAGTACGATTCACACAAAGATGACATATGGCATCGA
AGTATGACAGTTGCTGACAGAGAAGTTCGTGTATCACTCAAAGATACCAC
TGGAACGAGCTGGTTAAAAACACCCGCACCTTTAATCAGTTGGACCACAG
CAATCGTAGTTGTCTACTCCATCACAGATCGAAACAGTTTCGCATTGGCA
CGACACATCCTCGAAATCATCGACAAGATAAAACCTCTCAGTTCACGGTG
TACTCTTTTAATCGGAAATAAATGCGATCTAATGCATCTCAGACAGGTCC
CTAAAAGTGATGCTAAAAAACTAGCCGATGATTTCGGCGTACACTTCTTA
GAGTGTTCAGCGGCAGAAAATTATGATGATATATTCAGCTCATTTACAAG
ACTCTTAGTGGAAGCTATGATTGCACAAAGTGCTAAGAAACATTCATGGG
ACGATCAGAACGCTGATGATGTTAAACAGAACGAGAATCGATTACGTAAA
CGTTCCCTTTCGACGGGACAAGCACCTAGTAAAGACAGTAACAACAATAC
GTCATTCCTTGGCGGATTACGTGAAAAGAAAGACTCTATGATTAAAATTG
ATGAACGTATACCAAGCCCCGTTGAACAGCGTGATACGCCTGCGCCGCAA
CGTAAGCAATCACTACGGCGTAAAATATCCGGCATAGGATCAAAACTTGT
AGGCTCTGGTCAGAGCAATAGGTGAATGAAGATGAAAGAGCACAaagatt
ttgataatattcacATTGCATTGGCTGGTGCAAAGAATTGTGGGAAATCA
GCACTGGCGGTTCGTTATTTGACCAAACGTTTCATTGGAGAGTACGATTC
ACACAAAGATGACATATGGCATCGAAGTATGACAGTTGCTGACAGAGAAG
TTCGTGTATCACTCAAAGATACCACTGGAACGAGCTGGTTAAAAACACCC
GCACCTTTAATCAGTTGGACCACAGCAATCGTAGTTGTCTACTCCATCAC
AGATCGAAACAGTTTCGCATTGGCACGACACATCCTCGAAATCATCGACA
AGATAAAACCTCTCAGTTCACGGTGTACTCTTTTAATCGGAAATAAATGC
GATCTAATGCATCTCAGACAGGTCCCTAAAAGTGATGCTAAAAAACTAGC
CGATGATTTCGGCGTACACTTCTTAGAGTGTTCAGCGGCAGAAAATTATG
ATGATATATTCAGCTCATTTACAAGACTCTTAGTGGAAGCTATGATTGCA
CAAAGTGCTAAGAAACATTCATGGGACGATCAGAACGCTGATGATGTTAA
ACAGAACGAGAATCGATTACGTAAACGTTCCCTTTCGACGGGACAAGCAC
CTAGTAAAGACAGTAACAACAATACGTCATTCCTTGGCGGATTACGTGAA
AAGAAAGACTCTATGATTAAAATTGATGAACGTATACCAAGCCCCGTTGA
ACAGCGTGATACGCCTGCGCCGCAACGTAAGCAATCACTACGGCGTAAAA
TATCCGGCATAGGATCAAAACTTGTAGGCTCTGGTCAGAGCAATAGGTGA
ATGAAGATGAAAGAGCACAaagattttgataatattcacATTGCATTGGC
TGGTGCAAAGAATTGTGGGAAATCAGCACTGGCGGTTCGTTATTTGACCA
AACGTTTCATTGGAGAGTACGATTCACACAAAGATGACATATGGCATCGA
AGTATGACAGTTGCTGACAGAGAAGTTCGTGTATCACTCAAAGATACCAC
TGGAACGAGCTGGTTAAAAACACCCGCACCTTTAATCAGTTGGACCACAG
CAATCGTAGTTGTCTACTCCATCACAGATCGAAACAGTTTCGCATTGGCA
CGACACATCCTCGAAATCATCGACAAGATAAAACCTCTCAGTTCACGGTG
TACTCTTTTAATCGGAAATAAATGCGATCTAATGCATCTCAGACAGGTCC
CTAAAAGTGATGCTAAAAAACTAGCCGATGATTTCGGCGTACACTTCTTA
GAGTGTTCAGCGGCAGAAAATTATGATGATATATTCAGCTCATTTACAAG
ACTCTTAGTGGAAGCTATGATTGCACAAAGTGCTAAGAAACATTCATGGG
ACGATCAGAACGCTGATGATGTTAAACAGAACGAGAATCGATTACGTAAA
CGTTCCCTTTCGACGGGACAAGCACCTAGTAAAGACAGTAACAACAATAC
GTCATTCCTTGGCGGATTACGTGAAAAGAAAGACTCTATGATTAAAATTG
ATGAACGTATACCAAGCCCCGTTGAACAGCGTGATACGCCTGCGCCGCAA
CGTAAGCAATCACTACGGCGTAAAATATCCGGCATAGGATCAAAACTTGT
AGGCTCTGGTCAGAGCAATAGGTGAATGAAGATGAAAGAGCACAaagatt
ttgataatattcacATTGCATTGGCTGGTGCAAAGAATTGTGGGAAATCA
GCACTGGCGGTTCGTTATTTGACCAAACGTTTCATTGGAGAGTACGATTC
ACACAAAGATGACATATGGCATCGAAGTATGACAGTTGCTGACAGAGAAG
TTCGTGTATCACTCAAAGATACCACTGGAACGAGCTGGTTAAAAACACCC
GCACCTTTAATCAGTTGGACCACAGCAATCGTAGTTGTCTACTCCATCAC
AGATCGAAACAGTTTCGCATTGGCACGACACATCCTCGAAATCATCGACA
AGATAAAACCTCTCAGTTCACGGTGTACTCTTTTAATCGGAAATAAATGC
GATCTAATGCATCTCAGACAGGTCCCTAAAAGTGATGCTAAAAAACTAGC
CGATGATTTCGGCGTACACTTCTTAGAGTGTTCAGCGGCAGAAAATTATG
ATGATATATTCAGCTCATTTACAAGACTCTTAGTGGAAGCTATGATTGCA
CAAAGTGCTAAGAAACATTCATGGGACGATCAGAACGCTGATGATGTTAA
ACAGAACGAGAATCGATTACGTAAACGTTCCCTTTCGACGGGACAAGCAC
CTAGTAAAGACAGTAACAACAATACGTCATTCCTTGGCGGATTACGTGAA
AAGAAAGACTCTATGATTAAAATTGATGAACGTATACCAAGCCCCGTTGA
ACAGCGTGATACGCCTGCGCCGCAACGTAAGCAATCACTACGGCGTAAAA
TATCCGGCATAGGATCAAAACTTGTAGGCTCTGGTCAGAGCAATAGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000085_pilon | genome | sc0000085_pilon:926511..930305 + |
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