|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:809923..817459+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11676.1.p1 ID=MSTRG.11676.1.p1|Name=MSTRG.11676.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7537bp|location=Sequence derived from alignment at sc0000085_pilon:809923..817459+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAAAACTTTTTATCActaaatttttgatgtttttttttagtaagtgaaa
atactaTATATTGATTCAACCTTGCTGGAAAAAACCAACGTGCTGAAGCT
GAACATCATAACAAGAAGTGACGctagaaaaaccaaaacaacacCAAAAC
ATCTTCAACAACCCATCCTATCATCCACATCCTTGCATCCAAATTTTGGA
CTCTTTCATCATGTCGAACACTTCCACAAAGAGTATCCCAGTGAGGAGAG
TCCAAATCCACGAAGCCCATCAGATGCCTTCACGCTATTCCGAAACACCA
GGAGGAACGATTTTTTCAACTACCCCTGGAGGTAAACTTGTACATACTTT
TAACTTGCTTCTTCTCTGTTTAAAGTGAAGTTCCGTTTCGTTAGATTACC
TTAGGATGATTCTTTTTGATCGGCTAATCAATTGACTCTTGGTGAATATC
tatttttgttgtttggttGTTTGGAGACCAATCCAAAATGTGGCCATGAC
ACTTTCAATAGGTTCCCATATATATGGGAACACCATGCCCATGTTGTTAG
CACCTTTGACTGACTGCATTATTTCCCTCAAATGCATAGGAAGCCAAGGA
AGATACCTTCTTTATTCCTTCAAGTGAACTGCTGCAAGTTAGCTCAGTGC
GGTAAAATGCATAGTTCAATAAAACGCTGGTTTTTCGCAACACAACAGAG
GGGGTGTGCTGGGACCATTCTACGTCATGCTTCTAAGGAACACCAACAAA
TTTCCTCAAAAACACAAGTAAAATTAGACAAATTTCATCTTGCATTGTCC
AACAAGAGGgttattccaaaaatatttaaagaaagAATGATACAAAAATC
TTTCACCAATCCCTCAGAAATTAGGGTTAGAACAACTATCGATGCCATCT
TATGAGGAAAGAATCACCTGGAAAATATGAAACATTTACTAAAACACTTT
GGAAAATCCAAGcccccccccTCttagaaaacttttcaaatacatatttt
tgagaCCCCATTCTTAGTTCAAAGGTAAGCATTGTAAAATTTTGCAATAT
AAACTCAGGTGAGTTACGGCGTGTCCAATTCCAATGAAAACCAATAGCAC
TCATTTTAGGGTACTCattcatacatcgaaagaagtGTATTCCAACGTAC
ATTATTAACAAAATTGCTGTgttggaattattttttgcaaccaaaaaaag
taattttgttaATGGACATTTCTTTTGATCCTTCTTAAAGAATTACATGA
TGGTTAGCTCATTAGATTTCTGTTGGCAAATTTCTAATGTTAAGTATATC
TCAATAATTTAAAACCTTGCCAAAAGGTGGCTAATGATTTCTAAAACTGC
tgttagaaatattcaaataaaaaatggtaCATTGGCATTGTTAGGGGGTT
GAAGGGGATGTTGTTTATTAGCAATGCATTTGGGTTAAAAAGTTGATGGG
CTAATGGTGTAACAAAGCTTAAAGTTTGTAATGTTCGGTTCCTTttgatt
gaattgaattgaatcaaTGCTGATTATGCTTTGTTTGAGACAATATTATG
ACTTTACTGACAAATAATAGGGCAAACTGGCTAATATTGTAACATGTTAC
TTCTTTCTTTAGCCAATATCTTTGGTTTAACTATGTGCAGTTTCCGGGAA
TAACAACAGTGGGTAGTTAACCCCTTAAAGTCTCATTTCCAAACCTTGCC
TTAATTATTTTCACCTGAAATAAAATCTAggtcattttaatgaaaatgtt
attttttggcaaaataacccaaaaatccaaaatcctTCAACTCTAGTGCG
TTTGGACCTGTGTTAGCTTTTTAGCCCagaaattttattgatctagaagc
tattttgaagattttatcaacagaaaacaaattttttaatattttttgaa
tgtcacGGAGCTTGCTTTTTTATGAACATATGTCCTCTTCCATAAAACAA
AGCAATGTGCAAACGATAGTGAAAGTTACgcaaaccaaaataattttgtt
tccggtccacttGTTTTCAAGAGGCCAGGCGCGTTATGAGATGCTAATCG
TCGTAGGATATTTGATGACGATCTGGTAACTGTTGCTTGTGTTGGCTGTG
CTGGCTGAGGCTGAGTGGCCTAGAAACTGTTGGATGAGGAATAGTTGGAG
GAGTGGTCTCTAATGGTGAGGCTGGAAGCAGATTGGTAGGTGTGGGTAGT
GTTGTTGGTGATACAAATGTTGCTGGTGGAAGGAAGCAACGATTTTGCAG
TGTCACCCTCCCTGAGCCATTGGTTCTGACTCCGTATTGTCTGTTCGGAA
GTGTTTCTACAATCATCCCAGAGCGTAATGTTTTACCGTGTCTGTTGTAC
TTCTCACTGATCACATGGTTTTGTTTGGAGAATGCTTCTTCCCGTTGTCT
TGCGTCGATCACCCATGATGAGTGAAGCTGGTAGTGGGATGGGTGTGTGG
GTATGTGGTTATGCAGCTGGCGGTGAAATAGGATTTGGGCAGGACTGAGT
TTGAGATCTGGTAGAGGAGTATTTCTGTATAGTAATGTTTTTAGGTGTGG
GAAAGTTCTTAATAGCGTTCAGTATTGACTCAGAGGGTGCAATATTCCAT
TTGGTGTGATTCTAAGTCCGGCAAAATCAACTGCGTCTtgacaaaattga
aacttttcagCAATGAGGACGATTCCTTTCTCCCCACAAAGTTGAAGGTA
ATCCCATGCATGGTAGAAGGATTCCGTGATTGACGAGTCATACAGCAGAG
TATCATCCACACATTTCACCTTTAGTGGTACATCTTTAATAATGTCATCA
TAATGACTGGTGAAGGCATCACCAGATACTAAAAAACTTTGGGGCATACA
AAGATATCTGTATCGTCCCCATTCAGTTATAAAAGTCGTGAGATGTTGGC
TCTCTTCATCAATTGGTACAGAAAGTTATCCGTCAACTGCATCCAAAACA
GTCTTCTTGGTATTGGGAGGTACTTGACATGCAAGTTGGAACGGGGAGGG
ACAATGGTGAGTTTCGCGTTTACACTGTATGTTGAGTTGTTGGAGGTCAA
CTGTTCGTCTAATATTGCCGTTTTTCTTTCTGGCTGTGACCATGGTGGTG
CACCACTCAACTGGTGTTCCGATTGGTACAGGTGCTATAATGCCTCTCTT
GACGTCGTCGTCCAGACTCTTCTTGACTGCTTCCTTAAGGTGGAAAGGCA
CTGGGTTGGGGTTATGACAAACATGTGGCTTTGCATTAGGTTGAATACGT
GGACAGGTTTTGTATCCATGGATGGAAATGGTCAATCTCTGTTGAACGta
gttttggaaaattgttctaataGATAATGTTTGAGTTTTGGAACGTTTTC
CCCTGTAGGTTCAAATGGTAATTTTTCTGGACGTTGAGGTAGATTACTTG
GCAGGGTGTCAACCGAGGAAACGGTTGTTGACATGGGATATGGAAATGTC
TCTGGTAAAATGTTCAATTCTGTACACCCTTTACGGCTGACATAAATTCT
GTCAACTTCTTCACAAATGTATAGCGTTGAGTAGTAGTGTGATTGTCTAT
TATGAAAGTCATTGGTAGCCAGCCAGAACAGTGTAATGTGGATCCGCCAA
CGGCTCGAACTAGTTTATTGCATGGGATCAACGATTGTTTGTTTAGTTTG
AGTTTATTCAAATGTTGCGGTCCAGCTAAACAAATGCTAGCTCCACTATC
AGGAAAGATTTTCATTGACGTTGGTGTCGGTTTGGTGGTATTGGAGGTTG
GCGTAAGCTTCGCAGTTATTTCAGTGATCTCTGCAGTTGGACGGAACGCT
TTGCTTTTTTCGTCATAGGTGACATGGGCCAATAGTGCTTTGGCTGTTTC
TGATTTTGGTTTCTGACACACTTTcgaaaaatgatttgataatTTGCAAT
TGTGGCATGTCTTCCCCATGCTGGACACTTGGATGACCGTTCTTTTGATC
CGTGGGTAAGGCTGCCACAACCGGAACACAGAGCTTGTCTGGTTGGAAGC
TTTTGGCATTGATATTGCGATGTTCGGACCGCCATTGCATTGGATGCATC
TTGTAAGCTGTCATGATCTTTGAGGGCCATTTCGTAGGCTTCTGCATGCT
TGACGACATCTTCCATACTGTTGAGGGTGGTGGCCTTAGCAAGGATGTCG
ACCTGTAGAACTTCGTTATGTAAGCCCCGGATCCATTGGTCTCTGATGTA
CGAAGGTGAGAGATCATGATGACATTGCAGGCACGAAAAATTTGCAGTCT
TGTGCTGATGACTTTAAACGAACTAGATAGTCCCTTAGTTGTTCATTTTC
GTGCTGCGATAGTGATGAAAATTGCATTCTGTGGACGGTTGGATTCAACT
TTTTCGTAACAATGGTTTCAATGGCATTCAGGAAGTCGTTCTCATTGAAT
GTTAGAAAGTTTGGATGGTTGTTGATGATACTTGTTTGGGTAGCATCGTC
ACATGCGTTGTAAATCATTGATGCAATCTGGTTTGCTGAGATCCCTGCGA
TTTGTTTGTAAACAGCCCAATCGATTTTGAATTTATGAAACTGGGGATGG
GTCATGTCAGACGTAATGGAAGGTAGTTTTGCAGATTTATGTGAGGCGGT
TGGTACGACAGAAGGAGTTGGATTAGTTGTAGCATACGTAGTCGAGTCTG
GGGTACTGCTACTACAGATGTGTTGGAGAATCTTCATTATATCCCCAATA
ACTGTCTCCAGGTCTCTAGGGCAATATCTCTAATGTCATTCGATTCTCTG
TGAAGCTCTTTGCATACTGGTGTGCAGCTTCTTCTGGGATTCCAGCATCC
CGCAGGTATTTTTCCCAGTCTTGATCTGACTGTGACAGAGCCATGTAGAA
AGGTGATTGAAGGAAACGAATAAGTTTCAATGATGGCTACTGCCACATCT
AAATATATTGTTTGTAATACATTAGatctaaatgaaaagaaagaagaata
taAACTAATCTGAACATGTCAATCAAACATGattgaataattgcaatttg
atTGTTGAACGAAAAAATGGCCAATCTGGGCCAATTCCAGGGTAGGATAA
ctttcgattggtttcgatttaTtgtcaattacattcgattgattATGTTC
GATCATGATTATTCTTGAAGTTAAGTTTGATTGCAATTGAATTAAATTGA
CCCACTCCTTTAGATCTTGAGCGTGGATGGCTGCCCATACACCATCGAAA
AATCGGAGCAAGTGCATAAGTACAGCACAAGAGCTATTAAAGAAAGTGAA
AGCAATTAATTCAATCAATTTGATTACATCAAATATTCTTCTTAACACCA
AAGATATACTGCTaatctttttgataaatttttaataaattcaaaGTTCC
TTCTGATGCTTGAGTCTAAACGACATAGGAAGGCTTAAGACATCCAAAAA
ATAGTCAGTTGCACACTGTGTTCCTGAAGGAAGGGGAGAACACTGCTTTG
ATTGGCCTTGTAAATCTAAGTTTTGGTGTTCTGTAggatttaaagttttt
aatgtAATTTGAACATCAGAATCAGAgaaagcaatgaattttgatatgaa
ttcatgtataaaacatcaaatttggtcaactagttccaAAATTACAAGGT
TTTTAAGGCCGCTACAGCTCGGGCGCTTTGGTAGATTTTCAAGGCAcgtt
ttatacctcgattttcatcagcatttcatgttctttccgctggaaccatc
agattttgaatattttcaaaaaaataattttttgccctaccacctgatga
cgtcatctggcaggtggccagggggcaaaatttggtgttactatttaaaa
ttaagttttagaccctctatggatcatctgtgccaagtttcatgctttta
tcaccatctgaagtattcttacatTTTTATGTGCTAGCAGACCTCACTAG
TCCACCTCACGCTCCCTTTGTCAATTATTTCATTATATTGTTTGTTTGTG
CTCTTGATTCATATAAGATTTGTTCTGTAATGTTATATTGAGAACCCATG
GTCGATAGTCAACGCTTCCATAATCGCACTATCTTGAGAATTTCTGTAAG
TTTGCTGTTATGCCTGCTTTCAATCCTTCTCGCCATTCTGGGACTTTTGA
TTATGACATTCCTTTATTACTCATTTAGGTACCAGAATTATTTACGAGCG
GAAGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACCAACGA
AGTTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGATAATT
GAAGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAACCTCC
CCAAGTTcctaaagaggaaaagaaaCCTACCGGTATGTATTCTCagcttt
gaaaacattttcaatgtttcGATATATTGAACAATTTGCCAGTCATACGT
CTCATAGTGTCCCCCTTATTTTTGGGAGGCTCTAGTgacttttgaaattt
cccgaaaAAGGGGGttaacaaaattttgactttcttgAGGAACCTCAGAC
AAAAGGTAGCAGCAGGCATTTTATTAAGTTTCAACCATTAACGTTCATAA
AGAGTATCTGAGAAAACTTTTGCAAGAATGCAAGTTTGCAagaatttcaa
atgtttttgttcttgctaaaactttttcaatttctttatgcAGATGACGA
TATGTTTGAGATGGAGATGTAATATGTCAGAATTCCTCTCGCCTTGAATA
TGCTCGTCGCTGGTACCGAATTGTAAAGAATACtccaaaaaaaagaataa
aatgttccaaaaaagaaaaaaaggtttgtaatgaacaatcaatcaaaaga
aaagaaaagccaaaaaaatcaaatctacTATCTTTAGCCATAAATGTTGT
GTTCAGTTCTCGTCGAtgatcattttttttattttaccgacatGGTGCTG
GCTGGAACAAAAACCTCCTCGATTGAGGTGCTGTCGAATCCCTGATCTCT
GTTTTTTGTTCTATGTATCTAGTTTGTTTgtagtttttcatttgtaaata
GTATCCCAGTAGCTTTGTCTTTGTCCTTCCTTCTCGAGAAGCTTATCTTT
AAAAGCCtttattttgtactatattttattggaagagaatttttattaga
gtcttacttttattttGTGAGGCATTTTCGTCAATTTTGTCAAGTAAATG
CTTTGATTTAAGAGTGATTGCTGGCGAAAATTTCTCACATATTTTTTCAG
ATTGTTGTCATTATTTTATTGCTGGTGTTTTCTGGAGGTTGGGATtcaag
aaaattcttttttatcaagGTGCTGTTTATGTACCGACTTTTAAACTCTT
AGTGAAATAAACTAGTGGAAGAGTTGAACCTCCTTTGCTCTTCAACCTAG
TTTCACTTCTGTAAATAACTTCAAAAGTGtcgaattttattatttgaccA
TCCATTATATAGCATTTATTAACGAAAAGCTATCTTGTAACATACTGTTG
AacgcaaaaagaaaattttttaaatcgggAAGATTCATCTTGCCTTCCGA
ATTCGATTCCCACTCTGGTACCACGGCTCAATAGACA Coding sequence (CDS) from alignment at sc0000085_pilon:809923..817459+ >MSTRG.11676.1.p1 ID=MSTRG.11676.1.p1|Name=MSTRG.11676.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1062bp|location=Sequence derived from alignment at sc0000085_pilon:809923..817459+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGAACACTTCCACAAAGAGTATCCCAGTGAGGAGAGTCCAAATCCA
CGAAGCCCATCAGATGCCTTCACGCTATTCCGAAACACCAGGAGGAACGA
TTTTTTCAACTACCCCTGGAGGTACCAGAATTATTTACGAGCGGAAGTTT
TTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACCAACGAAGTTACC
TGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGATAATTGAAGAGG
ATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAACCTCCCCAAGTT
cctaaagaggaaaagaaaCCTACCGATGACGATATGTTTGAGATGGAGAT
GTAAATGTCGAACACTTCCACAAAGAGTATCCCAGTGAGGAGAGTCCAAA
TCCACGAAGCCCATCAGATGCCTTCACGCTATTCCGAAACACCAGGAGGA
ACGATTTTTTCAACTACCCCTGGAGGTACCAGAATTATTTACGAGCGGAA
GTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACCAACGAAGT
TACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGATAATTGAA
GAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAACCTCCCCA
AGTTcctaaagaggaaaagaaaCCTACCGATGACGATATGTTTGAGATGG
AGATGTAAATGTCGAACACTTCCACAAAGAGTATCCCAGTGAGGAGAGTC
CAAATCCACGAAGCCCATCAGATGCCTTCACGCTATTCCGAAACACCAGG
AGGAACGATTTTTTCAACTACCCCTGGAGGTACCAGAATTATTTACGAGC
GGAAGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACCAACG
AAGTTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGATAAT
TGAAGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAACCTC
CCCAAGTTcctaaagaggaaaagaaaCCTACCGATGACGATATGTTTGAG
ATGGAGATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:809923..817459 + |
|
