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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:747644..750174- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11670.1.p1 ID=MSTRG.11670.1.p1|Name=MSTRG.11670.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2531bp|location=Sequence derived from alignment at sc0000085_pilon:747644..750174- (Clytia hemisphaerica_ch_hm2_pilon)
AAATACGTTAATATCAAGAAGAAGAAAATCCAGACTAACATACGAAAACT
GTCTTTCCAAAATCAGCCGGGTTTTCTAGAACTTGGTTTTAGACAAAATG
CTGCGATATACAGCTGTGAACGTTAACAATATCTTAACGAATATTGCGTA
TATTTTACCGAACGATTACAACAGGAATGAAGACACTGTCATTCTGTTTA
TTCCAGGAAATCCTGGTATTATTGAATTTTATGATTCATTTTTGGAACAA
CTTTATGAATTTTGTCAAATACCTTTGTTTGGGGTTTCATACGCAGGTAA
GAATGTCCGAAAGATAAAGGATTTTCTCCGAGCACCGGTATTGTTAGTCA
TTTCAAACGTTTAAATGATATGATAAAAAGTTGTTTAGGGATATGATCTT
TCAAAATCTATAAGACGAGCCCATTTCGATAAGTTGTTTTACGGGTCCGA
CCGACCCTGAAATTCCAAAAATCAAAATCAAAATCAAATTTATTTTGGTA
ATAAATTTTTATTTCATTGCTTTACAGACTCCCAAATTTTGACCGACCGA
CACTCTTTTTTGGGTAGCTTGGCCCGAAAAGCAACAAATTAAATTGTCCT
CGCCTAAGAGAGAAAAAACAATAAAGTTTGAATATCAAATATAGCTTCAA
CATCCTAGCTAAGAGCGCTAGAATATGAGGGACGATGTAACTCGAATCTC
ACACTCTTTACACCTTGCATGTTTTTCCAGGCCACAACATAGCTGAACAC
GAAAGCGCACTGGTCAATCGTCTGGCACGTCAGATATTTCCACGAATCGA
AACAAACAAAGAGAAAGCATACACACTGGAAGAGCAGATCAACCACAAAG
TACAATTCATCGAACAATATCTTCACAAAACACAGAATATCATCCTCATG
GCGCACTCCCTTGGCTCCTACATGAGTTTATCTCTTCTCCAAAGGATTTC
AAAAGAATACAATATAGTTCGCGTCATTCTATTGTTCCCAGTCTTCGAAC
GAACAATGGAGACAACGAAAGGCAAAAGTTTTGTTCCACGTTTCCAAAAT
TTCCGACATTCATTAATACGGACAGGTCACGTTATTGAGAATTTACCGAA
CATTTTACGGCAATCGATTTATTCGATAGCGGAGCAGAGATATAAAGCTG
ATAATGCACAAGCCATGAAGAAAGCATTGAAAGCCTTACTAACTCCAACT
TGTGCACGAAACATCGCTCAAATGTTGGACGATTTATCACAGTTCGGTGA
TCATTCAAAATTCTCCGATATATTTACAGAATTCGGTGAACGATTAACAC
TCTATTATGGTTCTAATGACGCATGGACACCTTTGGCTTATGGTCAGCGG
CTGTCCAAAAATTACCCTTTTGTCGATGTCCGGGTTGATGAGTATGATAT
CCAACATTGTTTTGTTTTAGAAAGTTGTTTCAAATTATCGAAAATTGTTG
CTTCGTTGATAGATCTAAGAAAAATCGACTACACTGTCCGAGTGATCAAA
GTTCGAAGCCAAGATGAGAATGAAAATTTGATTACTGAAAGATCTCAGAG
CAGGTCAGTATTCATTTCACAATAAGAATATGTAAATTGTTACACATATT
TTCCCGTGAGTATCACAGTTTATCTCTCTTTAAGTTCAACCTTTGACGAC
AGACTGTAAAAATGTTATCAGGAAAAAAAGAAGATTGTCATGGTTATTTT
CGTTCTCTCAAAATGCTTACATAATGAAATTGCGATAATCTGTGATTTTC
ATGGTATACAAAGTTTACTTTCACAATAACCACATTTAAAAATGTCTAAA
AATACAAATCGTAGTATAGTAAAAATGAGTATGAAATATCATCGTCCCCT
CAGTTATAAAGACTTCATACATAAATTTCTTTTATAGTCATTCATTCAGC
TCACATACCAGTGAGAAAGATGGCAGTTTACCAACCATATGTCTTTAATC
TCTATGATAAAAGTTTTGTTGATTTGTTCAACAATGTGCATCTCAACAAT
ATATGTCGATGTCCTAGCATATGTCTTTAACACGCAATACTTGATGAGAA
TGTTATCACTAAAGTTACATTTCCAGAAAAGCAGGGAAACAACAAGTAGA
AGAGACGGCTCACAAGCTACACACGTTGTTTTCATGGATATAAAGAACAC
ACAATGTTCATGGCACGTTACGAATACAATTCACCAGAAATTCCAGACAC
AAAACCAAAGTGACAAATCCAATAGAAGCTCCGGTAAAGACGAAAAGTCC
ACCGAAATATCGCCACGTGAAAGAACTGACGTCGTTCTCCGTTTGTTCAC
AAGCTGTGTACCACAACCAACGATCTAGCAGTTCCGCCATTTTTCCCGTC
TCAAAAGTGTTCAGAATTTCTTGCGAGAATGGCTCTTTCCAGGGCGAGTT
CTTCGGTACAATGAAAGCACTGAATATGGATTTCCGTTTCTCTTTGTAAA
GTCTTAGTTTATGGCAGAATTGTGGGAGTTGTGAGAGATATTTCAAGAAT
TTGTAATCTCCAATATAACCATCCAATGATC Coding sequence (CDS) from alignment at sc0000085_pilon:747644..750174- >MSTRG.11670.1.p1 ID=MSTRG.11670.1.p1|Name=MSTRG.11670.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3249bp|location=Sequence derived from alignment at sc0000085_pilon:747644..750174- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTCATTCAGCTCACATACCAGTGAGAAAGATGGCAGTTTACCAACCA
TATGTCTTTAAGCCACAACATAGCTGAACACGAAAGCGCACTGGTCAATC
GTCTGGCACGTCAGATATTTCCACGAATCGAAACAAACAAAGAGAAAGCA
TACACACTGGAAGAGCAGATCAACCACAAAGTACAATTCATCGAACAATA
TCTTCACAAAACACAGAATATCATCCTCATGGCGCACTCCCTTGGCTCCT
ACATGAGTTTATCTCTTCTCCAAAGGATTTCAAAAGAATACAATATAGTT
CGCGTCATTCTATTGTTCCCAGTCTTCGAACGAACAATGGAGACAACGAA
AGGCAAAAGTTTTGTTCCACGTTTCCAAAATTTCCGACATTCATTAATAC
GGACAGGTCACGTTATTGAGAATTTACCGAACATTTTACGGCAATCGATT
TATTCGATAGCGGAGCAGAGATATAAAGCTGATAATGCACAAGCCATGAA
GAAAGCATTGAAAGCCTTACTAACTCCAACTTGTGCACGAAACATCGCTC
AAATGTTGGACGATTTATCACAGTTCGGTGATCATTCAAAATTCTCCGAT
ATATTTACAGAATTCGGTGAACGATTAACACTCTATTATGGTTCTAATGA
CGCATGGACACCTTTGGCTTATGGTCAGCGGCTGTCCAAAAATTACCCTT
TTGTCGATGTCCGGGTTGATGAGTATGATATCCAACATTGTTTTGTTTTA
GAAAGTTGTTTCAAATTATCGAAAATTGTTGCTTCGTTGATAGATCTAAG
AAAAATCGACTACACTGTCCGAGTGATCAAAGTTCGAAGCCAAGATGAGA
ATGAAAATTTGATTACTGAAAGATCTCAGAGCAGATGCTGCGATATACAG
CTGTGAACGTTAACAATATCTTAACGAATATTGCGTATATTTTACCGAAC
GATTACAACAGGAATGAAGACACTGTCATTCTGTTTATTCCAGGAAATCC
TGGTATTATTGAATTTTATGATTCATTTTTGGAACAACTTTATGAATTTT
GTCAAATACCTTTGTTTGGGGTTTCATACGCAGTCATTCATTCAGCTCAC
ATACCAGTGAGAAAGATGGCAGTTTACCAACCATATGTCTTTAAGCCACA
ACATAGCTGAACACGAAAGCGCACTGGTCAATCGTCTGGCACGTCAGATA
TTTCCACGAATCGAAACAAACAAAGAGAAAGCATACACACTGGAAGAGCA
GATCAACCACAAAGTACAATTCATCGAACAATATCTTCACAAAACACAGA
ATATCATCCTCATGGCGCACTCCCTTGGCTCCTACATGAGTTTATCTCTT
CTCCAAAGGATTTCAAAAGAATACAATATAGTTCGCGTCATTCTATTGTT
CCCAGTCTTCGAACGAACAATGGAGACAACGAAAGGCAAAAGTTTTGTTC
CACGTTTCCAAAATTTCCGACATTCATTAATACGGACAGGTCACGTTATT
GAGAATTTACCGAACATTTTACGGCAATCGATTTATTCGATAGCGGAGCA
GAGATATAAAGCTGATAATGCACAAGCCATGAAGAAAGCATTGAAAGCCT
TACTAACTCCAACTTGTGCACGAAACATCGCTCAAATGTTGGACGATTTA
TCACAGTTCGGTGATCATTCAAAATTCTCCGATATATTTACAGAATTCGG
TGAACGATTAACACTCTATTATGGTTCTAATGACGCATGGACACCTTTGG
CTTATGGTCAGCGGCTGTCCAAAAATTACCCTTTTGTCGATGTCCGGGTT
GATGAGTATGATATCCAACATTGTTTTGTTTTAGAAAGTTGTTTCAAATT
ATCGAAAATTGTTGCTTCGTTGATAGATCTAAGAAAAATCGACTACACTG
TCCGAGTGATCAAAGTTCGAAGCCAAGATGAGAATGAAAATTTGATTACT
GAAAGATCTCAGAGCAGATGCTGCGATATACAGCTGTGAACGTTAACAAT
ATCTTAACGAATATTGCGTATATTTTACCGAACGATTACAACAGGAATGA
AGACACTGTCATTCTGTTTATTCCAGGAAATCCTGGTATTATTGAATTTT
ATGATTCATTTTTGGAACAACTTTATGAATTTTGTCAAATACCTTTGTTT
GGGGTTTCATACGCAGTCATTCATTCAGCTCACATACCAGTGAGAAAGAT
GGCAGTTTACCAACCATATGTCTTTAAGCCACAACATAGCTGAACACGAA
AGCGCACTGGTCAATCGTCTGGCACGTCAGATATTTCCACGAATCGAAAC
AAACAAAGAGAAAGCATACACACTGGAAGAGCAGATCAACCACAAAGTAC
AATTCATCGAACAATATCTTCACAAAACACAGAATATCATCCTCATGGCG
CACTCCCTTGGCTCCTACATGAGTTTATCTCTTCTCCAAAGGATTTCAAA
AGAATACAATATAGTTCGCGTCATTCTATTGTTCCCAGTCTTCGAACGAA
CAATGGAGACAACGAAAGGCAAAAGTTTTGTTCCACGTTTCCAAAATTTC
CGACATTCATTAATACGGACAGGTCACGTTATTGAGAATTTACCGAACAT
TTTACGGCAATCGATTTATTCGATAGCGGAGCAGAGATATAAAGCTGATA
ATGCACAAGCCATGAAGAAAGCATTGAAAGCCTTACTAACTCCAACTTGT
GCACGAAACATCGCTCAAATGTTGGACGATTTATCACAGTTCGGTGATCA
TTCAAAATTCTCCGATATATTTACAGAATTCGGTGAACGATTAACACTCT
ATTATGGTTCTAATGACGCATGGACACCTTTGGCTTATGGTCAGCGGCTG
TCCAAAAATTACCCTTTTGTCGATGTCCGGGTTGATGAGTATGATATCCA
ACATTGTTTTGTTTTAGAAAGTTGTTTCAAATTATCGAAAATTGTTGCTT
CGTTGATAGATCTAAGAAAAATCGACTACACTGTCCGAGTGATCAAAGTT
CGAAGCCAAGATGAGAATGAAAATTTGATTACTGAAAGATCTCAGAGCAG
ATGCTGCGATATACAGCTGTGAACGTTAACAATATCTTAACGAATATTGC
GTATATTTTACCGAACGATTACAACAGGAATGAAGACACTGTCATTCTGT
TTATTCCAGGAAATCCTGGTATTATTGAATTTTATGATTCATTTTTGGAA
CAACTTTATGAATTTTGTCAAATACCTTTGTTTGGGGTTTCATACGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:747644..750174 - |
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