MSTRG.11666.1.p2 (mRNA) -

Overview
NameMSTRG.11666.1.p2
Unique NameMSTRG.11666.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000085_pilon:724114..726647-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11666.1.p2 ID=MSTRG.11666.1.p2|Name=MSTRG.11666.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2534bp|location=Sequence derived from alignment at sc0000085_pilon:724114..726647- (Clytia hemisphaerica_ch_hm2_pilon)
GGAGAAACTATCATTTTTGAACAAATTGTCGGTTGTGGTTGGTTGCTATG ACGAAAGCAAGAGTTATGAGAAGTACTTGTATCCTCTTACAGTTCGTGTG TGTGTCTACACAAGATTTTCACTTCGAGTGAGAATGGCTTTAAAAGGAGA GATGGAGATTTGTCAATTTATACTCTTTAAGAATCTGGATTTTAGAATAT TAGAGAGAGATTTTGAGAGGCGGAGTAAAAGATATTTTTGGAATTCAAGA AAAAGAAAGAAAAAAATCTCACAGTTTGTAATGGATCAAAAGTTTAATAA TAAACAAACTAATCTTGAGCCAAAACTCTCGAGCTCTGAAACTGTTTACT AAGCTAACACTGTATGGGATTTATATGGAAGGAACTATGGCTTGCTGTGT TCATTCGATTAAGACTACATTGTGCGGATATATCCATGTGAAAGTTCGCT ATAATCACACTGCCAGATACTCGGCTTGAAACCTGCTAAATCTCACAGCT CTCACACTGTGTGTGTGAAACATAAGACACATGAACTTTTGCGAGAATTC TTTTCATCTTGTATTGTCTTGGCGCTATGGACAGCGCATAACTGCCATGC TATATATTCCTTCAAGAAAGCTTCTTGTCATTTGATCTAATTTTATTTTT CTAGAAGGTTGTTACATAAATAGAGATTGGTTGACTTTTGGTTTTGTATA TTTGAGTTGTTGGAGAGGTTGTGTAAAGATGATTCAAAATATCATCTCTG ATCAGGTGAATGACAAACAAAACAAAGAACTTCAAAAGAAGAATAAGAGC GTGAAGAAGGATGTCAAGAAAGTGAAAAATATCAAAATGGTGGATGGGAA CGGGAAAGTTGTGTACCGACCAATTCACCGGAACGAATTCGAGAGGCGGA CAAGTATCCGGATCAGTGGCCGTCATAAGGATTCGTACAACCGACTTTAT ATCAGGGATCGAAAATATTTCAAACGGTTATTGAAGGAGTTTAATAATGC CACTGAACAATTTTCTTTGCAAGATTTGATCAAACAAGACAAATATCAAA GCATGCTTCAGCCTGGAGCAAGACATCATTTTATACCGTCCGGGCTAGCC AATGTAAAGTTGAAATTTTGTACTCGCTGTGAAGACGAGTCGAAACATGT TCTGATGGAGAGATATTACATCGACACGAACGATAAAGCCCATTACCGGA CTGTTTTATGCTACGGATGTATGGGTACCGTATTACGGAATCACAAGGAA ATGTCAGAACCGGGAACTAAATTCATGGAATACTACTGACAAAGATTCTT TTGTTTTACATATAAATTTGGAAATATATTTCATACAGTCTATTATTTGT AAAATGCTACCTATAACCGAGCCTATAACAAGCAAACAAAAAACGAAAAA ACAACCAGTGAAAGATGGCAAAAATATGTGTTTAGATGTTTGTCAAGACT GGCGAAAAATATTATTTCGGGTCTTATTTCAAAACAGTATTATCCGATAT AGCAGAAATATCAAAACAAAAACAACAGCGTTTTGTGGCCGATGAACAAA CTTCCGATCCTCGAGTTCCAACATGAAATGAAACACAAACTTAACAAACT ACCTACTTATGTTTGGTAGTCGCATGAACCTCATACAAGGTCCTGACTGT TCCCTTGCGTGGATATAAGTTTCAGAACCTATAACAAGTGTTGTCATAAA ATATATTTTGAAAAAAATTATAACTAAAACTAATCCTAATGTTCACGAAA ACTCGAAAACTCCTTCCTTTTTTATGAAAGTTCAGTAGATTCACACATTT GGTCTGAATAATTATGACATAATTATTCCGCAGTGATCTCAATGTAGCCA ATTTTTAGGGTGTTGCAAGGCCGAGAAATTAGATTCCTGATAATGGTTGT CCGTTTAAAATATTGCGTCTATCTATTTACAACAGATTAATACACCCCGT GGCAAGGATCAGGTAGAACCCGTCCTTTGTGAGAAAAGCGCTCAGAGTCT CGCCCATTTAAATTCTTATCTCTACCAGGGATAACATTAGCTTTCTGAAT TTCAGCCCAAGTTTGAATAATTATCAATCTTAAAGCAAAAGCTTTTCCAT TCTCCATCAAATTTGTGCTCACCAAGGGTAAAGGATTCTCACTACTCCAC TGAGACAAGGGTGTATAGAACTAATCTGATATAATGACATCTCAAATTTT AAACATCGTGATCTTGTAACATATTATAGTTAGAAGATTTCACTTACTTA CTAGCTTCCCAGATTATTCTTTCAAATTATAACTTTGTACCTATTATAAC TGTTATGGCGATATTTTGTGATATATAAAGTATTCTGGCAATAAGAAGAG CATAGTTTATGTAATTATTATGAAGTCCAATATTTGTTAGCCCGGAACCA ATTTGCTCTGTACATCTGTACATCTTTAAAACATATCCAAACGTTTGCTC AAGTTACGCCTGTCTCCAGATAACTCCTAATCCCTGAGGTTAAAAATGTA CATAACATTGCTGGGTTATTATGGTTAATTTGAG

Coding sequence (CDS) from alignment at sc0000085_pilon:724114..726647-

>MSTRG.11666.1.p2 ID=MSTRG.11666.1.p2|Name=MSTRG.11666.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=351bp|location=Sequence derived from alignment at sc0000085_pilon:724114..726647- (Clytia hemisphaerica_ch_hm2_pilon)
GAGAAACTATCATTTTTGAACAAATTGTCGGTTGTGGTTGGTTGCTATGA
CGAAAGCAAGAGTTATGAGAAGTACTTGTATCCTCTTACAGTTCGTGTGT
GTGTCTACACAAGATTTTCACTTCGAGTGAGAATGGCTTTAAAAGGAGAG
ATGGAGATTTGTCAATTTATACTCTTTAAGAATCTGGATTTTAGAATATT
AGAGAGAGATTTTGAGAGGCGGAGTAAAAGATATTTTTGGAATTCAAGAA
AAAGAAAGAAAAAAATCTCACAGTTTGTAATGGATCAAAAGTTTAATAAT
AAACAAACTAATCTTGAGCCAAAACTCTCGAGCTCTGAAACTGTTTACTA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11666MSTRG.11666Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11666.1.p2.exon1MSTRG.11666.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11666.1.p2MSTRG.11666.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085_pilongenomesc0000085_pilon:724114..726647 -