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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:683005..687003+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11664.4.p1 ID=MSTRG.11664.4.p1|Name=MSTRG.11664.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3999bp|location=Sequence derived from alignment at sc0000085_pilon:683005..687003+ (Clytia hemisphaerica_ch_hm2_pilon)
agtgatgtaaaatttgaaaatcatgaaatataaaTAATAACAGACAACAT
CATGAATGACAATTTCACCATGGAGACTAGAAAGGTTATACATGAAGGAT
TCTTGAAGAAGTCTCCACCtcaagcaaaaattgaaaaaggctTCAAGGTA
AGCAAGCTTATAAGCTCATATTTTTAAGTGATTGTTTACAAACATGAAAG
TAGCttaaaaattgattctaaatttCTTATTTCCCACTTTCTTTACTTAT
TTTTGGACGCCAATATAAGATGTCAAACTTGCTGTTCCAACTGTTTTTAG
GTTGTCCCTCACTTTTCTATCGATATCAGATAAATACTTGACTGCCTTGC
AATGCTGgtttatgtttcttttgttCCAAATGGAAAATAATAAGTATATT
AATATCACAATGATGATTATTTTCTAGTGGCACAAGAGATATTTTCGACT
ATGTTCTGACAAAACACTGGAATActacaaagaaaagaaagaaaagaagc
ctttaaaagaaCCTATCGATTTGAGAAATTGTCAAAATGTTGTACCTGAC
CCAAATGAAGAAGAATTCAAAATCAGTGGTGTAAAGTTTGGTGAGAAATG
GCGTTGGTTCTTCAAACTTGAGACACCTGAACGAACTTATCATTTCATCG
CTTCCACTAAAAGTGACATGAATCAATGGATCGAGAAAATTAACATGttg
aatcaaaatcaatttacagGTATCCTTAAATTATGGATTTCATGGACTTC
TAACTAAATACACCCTTCCCTTATTCACTATTTGTCATATTCTTGCctca
aataaaacttttttataaaactttttttcttaaaatttagaTTCAGATGG
AATAGAGCTACCTAACCGATCAAACTCATTATCAAGTGCTGTATCCACAA
CAAGTAGTAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCAGTCCA
AGTTCTCGGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCTAGTTC
AGCTCATTCTCAAGAACATTATCGAGTACCAGGAATATCCAATAGATTCA
ATACTACACCAGCATCTGAAATGTTCCCAAAGGTAACTGTTGAATTGCCT
CGCACATTGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACCACCCC
GGATGGATATGATATTTTAGATGTGGTCAATCAAACTGATCATGAAGATA
TTTATAAAGTTCCTATCAATAATACACCCTCCTCATCTTACTCCATACCA
CCCAATCGACCAGTACCTATTCCCAAACAATCAACCTCCAAACCGCCGCC
ACCACTTCCAAACCCAGCAACTAAACAAGCTCCAACACGAACACCTGATT
TTGGAATGATAGGTTACGaaaaaatggatcccaaaaatgaaaaacaacaa
caacaacagcatcaTCAAGATTCAGATTCTTATGAACTTTCTTATTATCC
TATGAGACCAAAGGATGAACTGCCATCTAGAACACACACAGGACCAAGTC
CTGAAAAGAAATTCACAACAATGCCATGGATGCTAAGAGATACAAATTCA
CAAAAATCTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGATGTCCC
ACCAAAAAGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTACACCTA
AATCCCCTAATGATAGTGAAGGTATCAAATCTTGGGATCTAACAGCTGAT
AGTACTTTATCTTCCCTAGATTACTTATGGAAAGCTATAATTCTCCTTTT
TTCCCAAGTTAACTATTCAAGCTTTAAAGAAATCCATCATTTTCCCTACA
ATCCATTATAACTTAatatatttctttcatttcttaAACTGGAATTGCTA
GTCCTTCAGTAATCAATACTTTAGATTCTATTCTACTCTCTATTTTTGAA
GTAAAATAATCCCTTTAAGAATTCTAAACGTTCTTTGTTTGTCATTACAG
ACCCACCTCCTGTGCAGCGAGAAACAAAGCCTAATTTGCCACCGCGTGTT
GACCGTGCAAAGAAGCCGTCCTCTTCTACTTTACCACCACACTGGCGTCT
GCAAGGGGAAGATAGTTTTGATGGTATGCCTAAACCAAGTTATTATAATA
TTTATGACGATGATAATACAAACTCTGAGCCATTACTTGGCTATAACGAA
CTACCAAATCTGTCATCACGTCCTGATCCTTACCAACAACACCAATTAAC
TAACAACAGCACGACTGCACTTAACGATACAACTGTAACTCTTGACTCAG
ATGGTAATAAACTAACTGTTGATAAAATTGCACATATCAATATAAAAATC
GCACCAGATAATACACGACCAGTACCACCTACACCAGAACAAAACACTAC
ATATGAGAATTCATCTTCTCCAGCACGCAAAGTCTCCTCTGCATCAAACT
CATCAAAAGTCTCATATGAGAATGATGATGCTTTTGATGGGATcagttat
gaaaattttaaggacAGGGTAAGCATGAAATGAATGTTTTAGGATGTTGA
GTATGTCAGTGTGTCTTTATTCTTTGATTTCACTGATGATTGGTGCCTGA
GGActatgaaactctgagtttgaaacatagatattgtgtcaactctttat
tatatatTCATCCGTTCAAAATATGCACCACcgctgcaatgtcttctgac
atttcGTTACTATTAAGAAAGCTGCAAGTGGTGTATTGACTAGAAACAAC
AGAATAGTTTCCAGAGGGcattacaatggtgcatattTTGAATCCTACAG
GATGAGACGACTGGGTCCAACCATCAGATTATCAGTGATAAAAACCTACA
ACTGTAGGCTAGGCTTTGAATGTATTATGAAATACTCCATATGAAATGCA
AGGCTCGTATCATTGCTATTTTCATAGATTGTTATCAATCGCATGTTTTT
GTAAGAAGCTTAAAACTAATCTTTGTAGTCTTTATTTTTTGTAGTAAAAC
CTGGTAAAACAATGAATCATTACCCATTCTCCATAGAAGTTATAGTGGTC
GAAAGTTTGATGATTATTTCTTGAATTGTTTGGTTATAGCCGAAGCGACC
TTTGCTGTACTCTCCAGTTGAAGGCAATCGATACAACTCTCAATCTTCTG
AAGAAGCCAGAGAAAGAGATGTGGAGATCGAAGAATCCGAACCTGGTAGT
GGTCACTACCTTATTGTTGATGTCACAGCCACCAAAGCTGTTGAAGGCGG
TTTGGTTAACCGGGAAAGTCCTATAAATTGTGCCAGATGAGAGtaaaatg
aaatttgttttgaatttaagtTACAGTTTTATTGGAAAAGGCTTTTATTT
AACATACCTTGATGAAGTGTCGATCATTTCAACAACAGACCTTTTGGCCT
TTTTGTTCATATGTATTTTTACCTTATAATAATGCATACTACAGTATTAA
AAAATGATGTACTATaattctaaaaacattttttaccaatgatttacttt
gttttgtaattttataccttttttactgaattctataatttatttttgtg
taatgattcattttaaTATAATCACTTTTCTATCAAACttatttttgagg
atttatctctatttttgtagtgattttttatggaatataatcaaatttat
ttcgtattgttttgtatttttattgaagtattttCAGTGTCTAAAACAAA
ACTAGAGTACCTCGATCGTGTCTCATGATAAGTTAGTTAAATTGAACCCT
AAGGAAGGACCAGAAAAGACAGACCTGGTATGGGTCCAAGTTTTAATAAC
TTTATATCCGTTTTCacattatttttagaaattttctataaaaatatctt
GTACATAGCTAACGTATTTTTTGTTCCtgtcaaaatattattattgCAAA
TTTAACAAATTGCGGGAAAAACTCAAAGAAATATGCTTTCTTATTAATTC
CTCTCCTACTGCTATTCCTAAACTTCAATATAATTTACCAGCATACTTAC
TGTATTGTATTTGGGCATCTTCAATCAGGTGTTTCAATTCAACATTTGT Coding sequence (CDS) from alignment at sc0000085_pilon:683005..687003+ >MSTRG.11664.4.p1 ID=MSTRG.11664.4.p1|Name=MSTRG.11664.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6870bp|location=Sequence derived from alignment at sc0000085_pilon:683005..687003+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGACAATTTCACCATGGAGACTAGAAAGGTTATACATGAAGGATT
CTTGAAGAAGTCTCCACCtcaagcaaaaattgaaaaaggctTCAAGTGGC
ACAAGAGATATTTTCGACTATGTTCTGACAAAACACTGGAATActacaaa
gaaaagaaagaaaagaagcctttaaaagaaCCTATCGATTTGAGAAATTG
TCAAAATGTTGTACCTGACCCAAATGAAGAAGAATTCAAAATCAGTGGTG
TAAAGTTTGGTGAGAAATGGCGTTGGTTCTTCAAACTTGAGACACCTGAA
CGAACTTATCATTTCATCGCTTCCACTAAAAGTGACATGAATCAATGGAT
CGAGAAAATTAACATGttgaatcaaaatcaatttacagaTTCAGATGGAA
TAGAGCTACCTAACCGATCAAACTCATTATCAAGTGCTGTATCCACAACA
AGTAGTAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCAGTCCAAG
TTCTCGGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCTAGTTCAG
CTCATTCTCAAGAACATTATCGAGTACCAGGAATATCCAATAGATTCAAT
ACTACACCAGCATCTGAAATGTTCCCAAAGGTAACTGTTGAATTGCCTCG
CACATTGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACCACCCCGG
ATGGATATGATATTTTAGATGTGGTCAATCAAACTGATCATGAAGATATT
TATAAAGTTCCTATCAATAATACACCCTCCTCATCTTACTCCATACCACC
CAATCGACCAGTACCTATTCCCAAACAATCAACCTCCAAACCGCCGCCAC
CACTTCCAAACCCAGCAACTAAACAAGCTCCAACACGAACACCTGATTTT
GGAATGATAGGTTACGaaaaaatggatcccaaaaatgaaaaacaacaaca
acaacagcatcaTCAAGATTCAGATTCTTATGAACTTTCTTATTATCCTA
TGAGACCAAAGGATGAACTGCCATCTAGAACACACACAGGACCAAGTCCT
GAAAAGAAATTCACAACAATGCCATGGATGCTAAGAGATACAAATTCACA
AAAATCTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGATGTCCCAC
CAAAAAGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTACACCTAAA
TCCCCTAATGATAGTGAAGACCCACCTCCTGTGCAGCGAGAAACAAAGCC
TAATTTGCCACCGCGTGTTGACCGTGCAAAGAAGCCGTCCTCTTCTACTT
TACCACCACACTGGCGTCTGCAAGGGGAAGATAGTTTTGATGCCGAAGCG
ACCTTTGCTGTACTCTCCAGTTGAATGAATGACAATTTCACCATGGAGAC
TAGAAAGGTTATACATGAAGGATTCTTGAAGAAGTCTCCACCtcaagcaa
aaattgaaaaaggctTCAAGTGGCACAAGAGATATTTTCGACTATGTTCT
GACAAAACACTGGAATActacaaagaaaagaaagaaaagaagcctttaaa
agaaCCTATCGATTTGAGAAATTGTCAAAATGTTGTACCTGACCCAAATG
AAGAAGAATTCAAAATCAGTGGTGTAAAGTTTGGTGAGAAATGGCGTTGG
TTCTTCAAACTTGAGACACCTGAACGAACTTATCATTTCATCGCTTCCAC
TAAAAGTGACATGAATCAATGGATCGAGAAAATTAACATGttgaatcaaa
atcaatttacagaTTCAGATGGAATAGAGCTACCTAACCGATCAAACTCA
TTATCAAGTGCTGTATCCACAACAAGTAGTAGTTCTAATATGTCCTCTCC
CGTTATGGTCAGGACCAGTCCAAGTTCTCGGAGACCATCAAACCAATCTG
CATCAAGATCAAGAGCTAGTTCAGCTCATTCTCAAGAACATTATCGAGTA
CCAGGAATATCCAATAGATTCAATACTACACCAGCATCTGAAATGTTCCC
AAAGGTAACTGTTGAATTGCCTCGCACATTGATTTCCCATGCGCCAATCC
AATCAGATGTTGGTACCACCCCGGATGGATATGATATTTTAGATGTGGTC
AATCAAACTGATCATGAAGATATTTATAAAGTTCCTATCAATAATACACC
CTCCTCATCTTACTCCATACCACCCAATCGACCAGTACCTATTCCCAAAC
AATCAACCTCCAAACCGCCGCCACCACTTCCAAACCCAGCAACTAAACAA
GCTCCAACACGAACACCTGATTTTGGAATGATAGGTTACGaaaaaatgga
tcccaaaaatgaaaaacaacaacaacaacagcatcaTCAAGATTCAGATT
CTTATGAACTTTCTTATTATCCTATGAGACCAAAGGATGAACTGCCATCT
AGAACACACACAGGACCAAGTCCTGAAAAGAAATTCACAACAATGCCATG
GATGCTAAGAGATACAAATTCACAAAAATCTTCCTCTCTTCCACGCCATC
ATGTTGCGACACCGGATGTCCCACCAAAAAGAGAAGATCCATCCTTCTCT
GAAATACCAAGTGTTACACCTAAATCCCCTAATGATAGTGAAGACCCACC
TCCTGTGCAGCGAGAAACAAAGCCTAATTTGCCACCGCGTGTTGACCGTG
CAAAGAAGCCGTCCTCTTCTACTTTACCACCACACTGGCGTCTGCAAGGG
GAAGATAGTTTTGATGCCGAAGCGACCTTTGCTGTACTCTCCAGTTGAAT
GAATGACAATTTCACCATGGAGACTAGAAAGGTTATACATGAAGGATTCT
TGAAGAAGTCTCCACCtcaagcaaaaattgaaaaaggctTCAAGTGGCAC
AAGAGATATTTTCGACTATGTTCTGACAAAACACTGGAATActacaaaga
aaagaaagaaaagaagcctttaaaagaaCCTATCGATTTGAGAAATTGTC
AAAATGTTGTACCTGACCCAAATGAAGAAGAATTCAAAATCAGTGGTGTA
AAGTTTGGTGAGAAATGGCGTTGGTTCTTCAAACTTGAGACACCTGAACG
AACTTATCATTTCATCGCTTCCACTAAAAGTGACATGAATCAATGGATCG
AGAAAATTAACATGttgaatcaaaatcaatttacagaTTCAGATGGAATA
GAGCTACCTAACCGATCAAACTCATTATCAAGTGCTGTATCCACAACAAG
TAGTAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCAGTCCAAGTT
CTCGGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCTAGTTCAGCT
CATTCTCAAGAACATTATCGAGTACCAGGAATATCCAATAGATTCAATAC
TACACCAGCATCTGAAATGTTCCCAAAGGTAACTGTTGAATTGCCTCGCA
CATTGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACCACCCCGGAT
GGATATGATATTTTAGATGTGGTCAATCAAACTGATCATGAAGATATTTA
TAAAGTTCCTATCAATAATACACCCTCCTCATCTTACTCCATACCACCCA
ATCGACCAGTACCTATTCCCAAACAATCAACCTCCAAACCGCCGCCACCA
CTTCCAAACCCAGCAACTAAACAAGCTCCAACACGAACACCTGATTTTGG
AATGATAGGTTACGaaaaaatggatcccaaaaatgaaaaacaacaacaac
aacagcatcaTCAAGATTCAGATTCTTATGAACTTTCTTATTATCCTATG
AGACCAAAGGATGAACTGCCATCTAGAACACACACAGGACCAAGTCCTGA
AAAGAAATTCACAACAATGCCATGGATGCTAAGAGATACAAATTCACAAA
AATCTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGATGTCCCACCA
AAAAGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTACACCTAAATC
CCCTAATGATAGTGAAGACCCACCTCCTGTGCAGCGAGAAACAAAGCCTA
ATTTGCCACCGCGTGTTGACCGTGCAAAGAAGCCGTCCTCTTCTACTTTA
CCACCACACTGGCGTCTGCAAGGGGAAGATAGTTTTGATGCCGAAGCGAC
CTTTGCTGTACTCTCCAGTTGAATGAATGACAATTTCACCATGGAGACTA
GAAAGGTTATACATGAAGGATTCTTGAAGAAGTCTCCACCtcaagcaaaa
attgaaaaaggctTCAAGTGGCACAAGAGATATTTTCGACTATGTTCTGA
CAAAACACTGGAATActacaaagaaaagaaagaaaagaagcctttaaaag
aaCCTATCGATTTGAGAAATTGTCAAAATGTTGTACCTGACCCAAATGAA
GAAGAATTCAAAATCAGTGGTGTAAAGTTTGGTGAGAAATGGCGTTGGTT
CTTCAAACTTGAGACACCTGAACGAACTTATCATTTCATCGCTTCCACTA
AAAGTGACATGAATCAATGGATCGAGAAAATTAACATGttgaatcaaaat
caatttacagaTTCAGATGGAATAGAGCTACCTAACCGATCAAACTCATT
ATCAAGTGCTGTATCCACAACAAGTAGTAGTTCTAATATGTCCTCTCCCG
TTATGGTCAGGACCAGTCCAAGTTCTCGGAGACCATCAAACCAATCTGCA
TCAAGATCAAGAGCTAGTTCAGCTCATTCTCAAGAACATTATCGAGTACC
AGGAATATCCAATAGATTCAATACTACACCAGCATCTGAAATGTTCCCAA
AGGTAACTGTTGAATTGCCTCGCACATTGATTTCCCATGCGCCAATCCAA
TCAGATGTTGGTACCACCCCGGATGGATATGATATTTTAGATGTGGTCAA
TCAAACTGATCATGAAGATATTTATAAAGTTCCTATCAATAATACACCCT
CCTCATCTTACTCCATACCACCCAATCGACCAGTACCTATTCCCAAACAA
TCAACCTCCAAACCGCCGCCACCACTTCCAAACCCAGCAACTAAACAAGC
TCCAACACGAACACCTGATTTTGGAATGATAGGTTACGaaaaaatggatc
ccaaaaatgaaaaacaacaacaacaacagcatcaTCAAGATTCAGATTCT
TATGAACTTTCTTATTATCCTATGAGACCAAAGGATGAACTGCCATCTAG
AACACACACAGGACCAAGTCCTGAAAAGAAATTCACAACAATGCCATGGA
TGCTAAGAGATACAAATTCACAAAAATCTTCCTCTCTTCCACGCCATCAT
GTTGCGACACCGGATGTCCCACCAAAAAGAGAAGATCCATCCTTCTCTGA
AATACCAAGTGTTACACCTAAATCCCCTAATGATAGTGAAGACCCACCTC
CTGTGCAGCGAGAAACAAAGCCTAATTTGCCACCGCGTGTTGACCGTGCA
AAGAAGCCGTCCTCTTCTACTTTACCACCACACTGGCGTCTGCAAGGGGA
AGATAGTTTTGATGCCGAAGCGACCTTTGCTGTACTCTCCAGTTGAATGA
ATGACAATTTCACCATGGAGACTAGAAAGGTTATACATGAAGGATTCTTG
AAGAAGTCTCCACCtcaagcaaaaattgaaaaaggctTCAAGTGGCACAA
GAGATATTTTCGACTATGTTCTGACAAAACACTGGAATActacaaagaaa
agaaagaaaagaagcctttaaaagaaCCTATCGATTTGAGAAATTGTCAA
AATGTTGTACCTGACCCAAATGAAGAAGAATTCAAAATCAGTGGTGTAAA
GTTTGGTGAGAAATGGCGTTGGTTCTTCAAACTTGAGACACCTGAACGAA
CTTATCATTTCATCGCTTCCACTAAAAGTGACATGAATCAATGGATCGAG
AAAATTAACATGttgaatcaaaatcaatttacagaTTCAGATGGAATAGA
GCTACCTAACCGATCAAACTCATTATCAAGTGCTGTATCCACAACAAGTA
GTAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCAGTCCAAGTTCT
CGGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCTAGTTCAGCTCA
TTCTCAAGAACATTATCGAGTACCAGGAATATCCAATAGATTCAATACTA
CACCAGCATCTGAAATGTTCCCAAAGGTAACTGTTGAATTGCCTCGCACA
TTGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACCACCCCGGATGG
ATATGATATTTTAGATGTGGTCAATCAAACTGATCATGAAGATATTTATA
AAGTTCCTATCAATAATACACCCTCCTCATCTTACTCCATACCACCCAAT
CGACCAGTACCTATTCCCAAACAATCAACCTCCAAACCGCCGCCACCACT
TCCAAACCCAGCAACTAAACAAGCTCCAACACGAACACCTGATTTTGGAA
TGATAGGTTACGaaaaaatggatcccaaaaatgaaaaacaacaacaacaa
cagcatcaTCAAGATTCAGATTCTTATGAACTTTCTTATTATCCTATGAG
ACCAAAGGATGAACTGCCATCTAGAACACACACAGGACCAAGTCCTGAAA
AGAAATTCACAACAATGCCATGGATGCTAAGAGATACAAATTCACAAAAA
TCTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGATGTCCCACCAAA
AAGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTACACCTAAATCCC
CTAATGATAGTGAAGACCCACCTCCTGTGCAGCGAGAAACAAAGCCTAAT
TTGCCACCGCGTGTTGACCGTGCAAAGAAGCCGTCCTCTTCTACTTTACC
ACCACACTGGCGTCTGCAAGGGGAAGATAGTTTTGATGCCGAAGCGACCT
TTGCTGTACTCTCCAGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:683005..687003 + |
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