MSTRG.11648.1.p1 (mRNA) -

Overview
NameMSTRG.11648.1.p1
Unique NameMSTRG.11648.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000085_pilon:468866..469935+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11648.1.p1 ID=MSTRG.11648.1.p1|Name=MSTRG.11648.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1070bp|location=Sequence derived from alignment at sc0000085_pilon:468866..469935+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTTGCTTGACACGGAGAGGCTGTATTTGCGCCCTCCAAACAAAGGTT
ATGGCATAAAAAGGagggaagataaaaaattacatTACTATTACATCTTA
GAAAAAGATAGCAAGATAATTTCGAGGTAAACGAAATTCTGTTTTTCTAT
GTATTAACTAAGTTTGAGTACTGGTCAATTTACTAAGAAGATTTAAAGGA
ATAACTTCATCTCGTTTTTGGTTTCTTTCAAGAAGATGCTTTTCACCAAT
GGATGCATCCTCCTTATCAGTCTGGGCTGCCTTCTCACCTTAACGAAAGC
AAATGACAACGTTCGACAAAAGCGTACCGTGGATCTCACCGAAGCCATGC
TAAGCGCCTCAATCAGGTCAGGGACCTCGTTATCTGGTACAACAGTGGGA
GATTTGAAGCAATCCAGTTACCGAGTGGCTGTCTCTGGATCAGTCGAGAA
CTACTCGAAATGGGCGTTATTATTCAAAGGATGTGAAATAGCAGCGGGTC
AGATGAATCTCCCGTTAAGAAGTGTAGCTGCTGGTCAACGCGAAGGATTT
GCCAGCCATAAAACAGCACACGCAGCAAAAGGAAGTTTCGTCAAATGTAT
GTTACTAGTTGGTGACAAGTTGGTTCATTTCATGTATTCAGCACCATATT
CGTTTGATTTTCATGCCAACTATCTAGCCGTTGGAATTTGCAACAAAGAC
ATGCAAAGTGACACCCATGGATACCCATGCAGAGACCTGACCGCCAAAAT
AATGTATTACTATACTCCTTCATTCGTCTCCATTCGTCAGTTTTACAGAA
ATATTCACACTGTCAAATACTGTGACGAAGATTTGTGTATTTCTGGCGTC
ATGGGAACAAGCCATCAACCAGAGATCAATCTCAAAGTCATGCCTCAAAA
GTACGAAGATCTTTACAATGAAGTAAAAGACGATTCCGTGAAAGACCACT
GGGGAAAAGATGAATACGAAAAGTTTGTTAATAGTTagtttcatttttta
gcttttagccacaatttctttcaattttactCCGAAAGAAAAGTATAATA
GCTAAATAACTCGAATGTCT

Coding sequence (CDS) from alignment at sc0000085_pilon:468866..469935+

>MSTRG.11648.1.p1 ID=MSTRG.11648.1.p1|Name=MSTRG.11648.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=753bp|location=Sequence derived from alignment at sc0000085_pilon:468866..469935+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTTCACCAATGGATGCATCCTCCTTATCAGTCTGGGCTGCCTTCT
CACCTTAACGAAAGCAAATGACAACGTTCGACAAAAGCGTACCGTGGATC
TCACCGAAGCCATGCTAAGCGCCTCAATCAGGTCAGGGACCTCGTTATCT
GGTACAACAGTGGGAGATTTGAAGCAATCCAGTTACCGAGTGGCTGTCTC
TGGATCAGTCGAGAACTACTCGAAATGGGCGTTATTATTCAAAGGATGTG
AAATAGCAGCGGGTCAGATGAATCTCCCGTTAAGAAGTGTAGCTGCTGGT
CAACGCGAAGGATTTGCCAGCCATAAAACAGCACACGCAGCAAAAGGAAG
TTTCGTCAAATGTATGTTACTAGTTGGTGACAAGTTGGTTCATTTCATGT
ATTCAGCACCATATTCGTTTGATTTTCATGCCAACTATCTAGCCGTTGGA
ATTTGCAACAAAGACATGCAAAGTGACACCCATGGATACCCATGCAGAGA
CCTGACCGCCAAAATAATGTATTACTATACTCCTTCATTCGTCTCCATTC
GTCAGTTTTACAGAAATATTCACACTGTCAAATACTGTGACGAAGATTTG
TGTATTTCTGGCGTCATGGGAACAAGCCATCAACCAGAGATCAATCTCAA
AGTCATGCCTCAAAAGTACGAAGATCTTTACAATGAAGTAAAAGACGATT
CCGTGAAAGACCACTGGGGAAAAGATGAATACGAAAAGTTTGTTAATAGT
Tag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11648MSTRG.11648Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11648.1.p1MSTRG.11648.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11648.1.p1.exon1MSTRG.11648.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11648.1.p1.exon2MSTRG.11648.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085_pilongenomesc0000085_pilon:468866..469935 +