MSTRG.11631.1.p1 (mRNA) -

Overview
NameMSTRG.11631.1.p1
Unique NameMSTRG.11631.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000085_pilon:204747..206573+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11631.1.p1 ID=MSTRG.11631.1.p1|Name=MSTRG.11631.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1827bp|location=Sequence derived from alignment at sc0000085_pilon:204747..206573+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTTGCTACCCACGACTTTTCTTTGATATTTAAATTATACAATCTAAAAC CTGAGACGCAGGAACTAATCACTTTCATGTTAGCACAGAAGGGGTTTGCT TGtgtatgtatatatttttttcgttctgaatttatcatattttcaagtaT GCTTCTAACGACTAGATTTGTCAACCTTCTAAAGTTCAATTCTAAACGGA GTTGCATGCGTTATGCATGCGCTTACTACCATGTTAAAAGTGGAGATGAA TTAATTGACCTTAAATCAGATACAGTGACCAAACCTTGTGATCAGATGCT TACAAAGATGTTTCAAGCAACGGTTGGCGATGACGTCTTCAGAGAAGATC CAACAACGCACGAACTGGAACTTAAAGCTGCTGAGATGTTCGGTAAAGAA AAAGCTTTATTTGCGCCGAGTGGTACTATGGGAAACCTTCTATGTATTTT AGCACATTGCCAAGGGAGAAGTCAAGAATTAATTATTGGGACGGACCAAC ACGTCTACTTTGGTGAGCAGGGTCATTTTATGCAGTATGGTGGCATCGTT GCTCGCCCGTTACCTAATCAAGATGACGGAAGCCTTCGTTTGGAAGGCGT CGAGAAGATCATACTCCGACAAGGTCCATATCACTGTAAAACTTCAATGC TTGTGTTGGAGAACACACACATGGTGAAAGGCGGAATACCGTTGCGTGAT CAATATCTCCAAGATGCTTATTCCTTATGTAAAAAGTACGACGTCAAACT CCACATAGATGGTGCTCGGCTGTTGGGAGCTGCCATAGCAACAGGCAATA CAATGAAGGAAATACTTCGAAATGCTGACTCAGTATCAATGTGTTTATCC AAAGGAATGGGATGTCCTGTTGGTTGTGTTATTGGTGGATCTGAAGAATT AATCGATAAGGCGCTTCATATCCGGAAAAGTTTAGGAGGAGGTATGAGAC AAATTGGTTATCTGACAGCTGCTGGAATATATGCTTTAGAAAATGCACAT CAATGGATCGAAATAGATCACCAACATGCTAGAGCGGTTGCTGACAACGT CAATTCTCTTGGTTTTGGAGATTCTGCTTTTGTTAATACGGAGCACGGGC TAACGAGTATTGTATTTATCGAGCTTAAAGACAGTAAATCGTCAGAAATT GTTCACATGCTCAGAGAAAGGTATAATATTGAAGCTATGGCCTTCACTGA CAAACGTGTGCGACTTTGCATGCATCGTAACATTTCAAGTGATGACATTG ATTATGTGAATAAGGCTTTATCTCGTGTTCTAGAATTGCATATTTCACGT GCAATTTAAACGAGGATATGTGTGCATCTTTTAGatgcatcacttttttt ttataagagccagtaaagtttttgctgaggctcggctgtttgtttgtttt ttggcactctgagcctaaaattgttcttatttatagggtgtaattgaggt agTTTAGGCGTTATACCTAACTTTTACTACTTCAACCCctttaaattgct taaaatttagtaatttcaggatcagcattgtttttaaattgttcttattt ctggtgattttgagcctcattgtccttataaaattgttcttatattcaaa aaaagtgtattttctaTCCAATTTACAGGAGAAACATTCACAAATCTGTG CAGATCTCCCTTCAAGAAACAAGTTTAAAAAATTAGTTATAAATATCATA AATTTCATACGAATTATATTTTAGGGATAGTGTATCTtattattggaaat ttttttgtgacGCTTGCATGTTaatgaatagttttttttttcgctcAACT TTTGATTAAAGTTAATATTAAAATAAT

Coding sequence (CDS) from alignment at sc0000085_pilon:204747..206573+

>MSTRG.11631.1.p1 ID=MSTRG.11631.1.p1|Name=MSTRG.11631.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000085_pilon:204747..206573+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTGCTACCCACGACTTTTCTTTGATATTTAAATTATACAATCTAAAACC
TGAGACGCAGGAACTAATCACTTTCATGTTAGCACAGAAGGGGTTTGCTT
GtgtatgtatatatttttttcgttctgaatttatcatattttcaagtaTG
CTTCTAACGACTAGATTTGTCAACCTTCTAAAGTTCAATTCTAAACGGAG
TTGCATGCGTTATGCATGCGCTTACTACCATGTTAAAAGTGGAGATGAAT
TAATTGACCTTAAATCAGATACAGTGACCAAACCTTGTGATCAGATGCTT
ACAAAGATGTTTCAAGCAACGGTTGGCGATGACGTCTTCAGAGAAGATCC
AACAACGCACGAACTGGAACTTAAAGCTGCTGAGATGTTCGGTAAAGAAA
AAGCTTTATTTGCGCCGAGTGGTACTATGGGAAACCTTCTATGTATTTTA
GCACATTGCCAAGGGAGAAGTCAAGAATTAATTATTGGGACGGACCAACA
CGTCTACTTTGGTGAGCAGGGTCATTTTATGCAGTATGGTGGCATCGTTG
CTCGCCCGTTACCTAATCAAGATGACGGAAGCCTTCGTTTGGAAGGCGTC
GAGAAGATCATACTCCGACAAGGTCCATATCACTGTAAAACTTCAATGCT
TGTGTTGGAGAACACACACATGGTGAAAGGCGGAATACCGTTGCGTGATC
AATATCTCCAAGATGCTTATTCCTTATGTAAAAAGTACGACGTCAAACTC
CACATAGATGGTGCTCGGCTGTTGGGAGCTGCCATAGCAACAGGCAATAC
AATGAAGGAAATACTTCGAAATGCTGACTCAGTATCAATGTGTTTATCCA
AAGGAATGGGATGTCCTGTTGGTTGTGTTATTGGTGGATCTGAAGAATTA
ATCGATAAGGCGCTTCATATCCGGAAAAGTTTAGGAGGAGGTATGAGACA
AATTGGTTATCTGACAGCTGCTGGAATATATGCTTTAGAAAATGCACATC
AATGGATCGAAATAGATCACCAACATGCTAGAGCGGTTGCTGACAACGTC
AATTCTCTTGGTTTTGGAGATTCTGCTTTTGTTAATACGGAGCACGGGCT
AACGAGTATTGTATTTATCGAGCTTAAAGACAGTAAATCGTCAGAAATTG
TTCACATGCTCAGAGAAAGGTATAATATTGAAGCTATGGCCTTCACTGAC
AAACGTGTGCGACTTTGCATGCATCGTAACATTTCAAGTGATGACATTGA
TTATGTGAATAAGGCTTTATCTCGTGTTCTAGAATTGCATATTTCACGTG
CAATTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11631MSTRG.11631Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11631.1.p1.exon1MSTRG.11631.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11631.1.p1MSTRG.11631.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085_pilongenomesc0000085_pilon:204747..206573 +