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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:104720..112911- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11629.2.p1 ID=MSTRG.11629.2.p1|Name=MSTRG.11629.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8192bp|location=Sequence derived from alignment at sc0000085_pilon:104720..112911- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCCGATGTAGATCGAGTCACGATCGCCGTCGACCAAGCAAGGATGTAA
ACATTCTAGCCTCTCTGCGGACACTTAAATGCCCACTATGTCTGATAGAT
AGATTCTGATAGAGTTCCAAACTGATTGTGAAGACGAGTGAGAAAACGAA
AAAACTAAAAGTTTTGTTCATCTGTTCATTATATGTAAGTATTTTTTGAC
TTTTCTATGACTTTTTACAGGGCAATCCTTTTCAACCTTCGATCAGTGAT
CTATCAACTTGATGAGGTTGAACTTAAAGCCTGAGGAATTAGCTAGAGAG
TGGAATCTTCAATATTTCCTACAGTAGATAGAGCAAGAATTATATACGCA
AGAATAGCTAGTCTTTTCTGGGAGATCGCCACAGTCTTTTGAACATACAT
ACATTTTTAAACCAATTTCATTTATCTTATTTTTGTTAATGCTTTTATAT
GTCTGTATGTAGGGAGAACAAACATTTATGTTGTTAACTACTGAAATATA
TAGATAGATACATTGGGTTAGCCGAACCTAAGTTCAAGAAACGATACGCT
AACCACAAGTCATCCTTCGCCAACGAAAAGTACGAAAAAGAAACTGAACT
TTCCAAGGAGATTTGGAGGTTGAAACGAAAGAATCGTGCCCCAAAGATTA
CTTGGAAGACAGTCCGTAAATGTCCACCGTTCAATCGTGCTTCGCTGGAA
TGTTCACTCTGCCTTAGCGAAAAATTAGAAATTGCCACATTCGACCAACC
TGAGAAACTGTTAAATTCAAGGAATGAACTGATCTCGAAATGTCGGCATG
TGAATAAGTTCACCCTCAAACTCCACGACACCAAAGACTGAAATGACGTC
AATTACTTTGACGAAGACTTTACAGTGTACAGTATATTTTTGTAAACTTG
AAACGAATTTTTGTATAGAATTTTTGACTGAAAAGTTGCGTGAAACTTTG
AGTATCAAACAATTCTTATCTCAACTTCAATTTATTGTGTAAAATGCTTC
CTCCGGGTCAAGCACTCTCTTGCTGAAGAAGATATAAGCAACTTAAGTAG
ATAGATAGATAGATACATAACTTATTACTCCAGCATAAATGTTTTTAATA
GACCTTTTTTCAAAGAGGACGTCCTGTTGAATAATTATGTAGTCCAGCCA
TAAAAACAATGATAGAGCCATGCATAATTACTGTATCATGCATATTGTAA
TAATTATGCATGGTTTTATCATTGTTTTTCTGCTGGACTACATAATTATT
CAACAGGGTGGCCTCTTTGAAAAAAGGTCTATGACAAACCGCGTCAATGA
AATTGGACCAGCAATTTTATTTTATTTTAAACAATATATTTCGAATACTT
GTGATTCATCTTCAGGTTCTAAAATATAAAATAGTAAAACAGTTAAAACC
ATTTAGTAAAAATATATATTTTCCATAACACGCATACATACAACCTACTC
TGATCAAAGAACATGTAACTGAAAAATCAAAATCTAAGTTCACTAAATCA
AAAGTGAATTCCACTACAACTCCCCTAGGCAATAAAATCTATTAAATCTT
TATTGTAAGAGTTCTACTTTTATATTCATCTTTGGTTTTCAGTTTTGGTT
TTACTTTATTAATCCACAGTGCCTCAAGGGACATTAAGCATTGTTCAGAT
TTAATTGTGCGATCTAGAATCATTACATTTTCCATCAAAATTTCACAATT
ACAATTTTGAAAATGTCTTCCCACTGGAGTGTTTACGTTGCGGTGCTCTT
TGATCCTGGTAATTAAGTGCCTGGCAGTCTGCCCGACATAGCTCGATTCA
CACCGAGAACATTTAATAAACAAACCGCGTCATAAAGTTGATTTGTTTTT
TTCAACACATCGAATCTCCAATATTTTAATATCACCACAATTTTCCATAT
TTGATTGATATTCGATTGTGTTTGATTGAGGTTTGCTTTTGTTTGATTGT
CATTCTATCAGATTGTGGAAGTACTTTGATTTGTGAAGTATCTTTACGTC
ACATAGAACAAAAGAAAATAGCAAAAGAACAAAGGAATTACCAATAGCTA
CCATTATTTCGGAACCATGATATGGGGAATCGCGATTTTATGGAAATGGA
AATCCTCATATCAAATAAAGCATCTTCTAAAAAATTTCATTCTTTCCCAT
AAATGGGAAAATGAAAAACAAAGAAACTTTGAGCCTTTAAGACCAGGGGA
TGTCAATGGAACTGTTTGATTACCAAACTAATCAAACTTAATCAAATTTA
ACAGTTGTTTTGGAGAACGCAACGTCCTATTATTGAATAACAAATTACTT
CACATACCTTAAAAGAAGAAATTTTGGCGGGAATTTAATTTGGCGGATGG
CCAAAAAAGTTTTTTCAGAGGGAATTTAATTTGGCGGATGGACGAAAAAT
CTAAATTTAGCGGGAATTTAATTTGGCGGTCGCTTAAAAATTTAACCTTA
AGATGGCGTCAAAACAGCAAAAAAATAGCGAAAACACCTTAAAAGAGATC
ATATTTTCAAAATGTTTAATTTGGCGGGAATTTAATTTGGCGGTTGGTGG
AAAAAAGAAATTTTGGCAGGAACTTAATTTGGCAGATTTCAGTCAAATCT
GCCAAATCCGCCAAATTTTCTTTCAGCCAAAATTTCTTCCTTTAAGGTAC
ATAACTTTCCCTCAGCCAATAAAAATATGATAAATTATCTTGTCTTTAGG
TAACTATTGTGGAGTAATTAGTTATTCAATAGGTCATCGCGTTCTCCAAA
CAACTATCCAACAATAGGTGTTCAGTTACCAAACCAACTACTAGAACAGT
AATCAAACCAAGAAATTTCGGTAAAGTTCAATGACTTGTTCGATTGATCT
GTTAATTAAAGTTTGATAACTATTCGATTATAGTTTGATAGGTCCGATTG
TAATTTGATAGGTTTGATCATAGTTAGACATTCATTCAATAATAGGCAAT
TTTCGCAATATATTTGCTACTCTAGTATATAATACCTGAGAATAGCAGAA
TGATTACGGAAAAGAACCAAGATACTACTCGAACACTCGTCGAACAACTC
GAACATACACCGAACAACATCGAACTGTATTTTTAATCTAACTAATCAAT
ATATTTCCACGGTAAAGCTCTATTACTGTTCGATTTAGTTTGGTAATCAA
ATGTCCTATCCTTCAAATAAGTTCGATTGAGTTTGATGGTTCGATTAATA
AAATTGGTTCGATTGGGTTCGGTTGACATCCCCTGGATAAAAAGAAGTTA
TAGTCTAAAAACCTGTAGTATTATCATGTAATGGGATGTCCTAATAAAAC
CATTACCCCCTGTGGACGACACCGTTTTTTGGAATTTTTTTTCACTTGGA
AATCCTGAGAAATTTTGAAAAAGGTTCCAGAAAATGCAAGATTTTCCTAA
TTATTTGGTCATCCCTATCAGAAAATCTAAGATTTTTCCTTAAAAATTCT
TGAATGTTACAGAAATCCTGAAGTTTTTTAAAAGTAAATTGTTTGAAATT
GAAATCCATTTCCTCCACAGGGGGTAACAGACTATAACTGGAACCGCCCA
ATAAACATTATAATATTACACCATAAATCTAGAAATTTTAATATTTCTGA
AATTTATTTTTCTTCAAAAAATTAAAACATTACAGAATGTTTCACGCCAA
ATACGATCATCAGATGTATGAATAAAAAATTTGAACAAATTCTACTATGT
AAAACATATTAGAAAGTAATTAACAGGCTATAAAAGTCATTAAAAGTAAT
AAAATTTGAGTTGATTGGCTAAAGAAATATGAATGGTAAAAATTGTGTCT
AGAGAAATAAAATGTATTGATAAGTGCATTGTAATTTAAATGTTAAAATT
ATCACACATCTGGGGGGGACTGTTTTGTAATTTTTCAATATAGGAATTTA
TTTACGTGTTGGCATTTTGAAATCAATTCCGATTTTGTGTTAACGAGCTC
ACGTTTAGAGGTGATTTATTTATTTAGCTCTACCTTGGTATAGAGCACTT
TGTCACCACAAACTACTGAAATTGTTGTTGAAATTTGAATATCTTGTAAA
GTACAAAAGTTGTATCAATGTCAAATTTTGACCATAGATAGATATTAATG
TAAAAAGAACTTTCCTTTCAAAATTTTTGAAATTTTTTATAGCCAAAAAT
TGAACATGGCTAAAATATGATGTCATCATTAAAAAAAAAAGAATTACAAT
TTATAGCGTCAAAATTTCATATTGAAATCACAAATAGTTTTAAGTTTGAC
GTAATGTTAGGTAGTAATCTTTATGATGTCGTAATATGTCACAATACAGG
TTTTTGGGCTATAACTTCTTGTAGGCTAAAAATCAATTTTTCTAACAGCT
ATGGAGAACATTATACTTCTTTCCAGCCGTGACATCATAATAACTTGGTC
TTTTTTCAATAAATGCTTTAAAGGGGACGTCTGGTCTGATTTTAGGTATT
GTTTTTTTAGAATTTTTGGAAAAATTATTCCAGGGAGATTAAAATGAGCT
ATCTCACTTCAAGAGATTTTTTTTCTATCACTTTCTATGGCCATTTAAAA
AATCCCTCTTTTTCAAAATTTATGACGTAGCTTATGTTATATGTTTTCTA
TGTTCTTTCAAGTAAACGAGATTAACTCCTCTTTCTGTGCAGCTGGCATT
TTTATAAGAAAATTTTAAGTAAGTCAGAGATGTGCAAGATCATTTAAAGT
CGTTAAAACATCTTTTTCCCAACATTTTGTCAATGAAAGCTTACTCCAAC
ATCTTCATAGAAAACTGAAATATTTATATTGTTGTGGACTGGAAAAATCA
TCGAAATTAGAAGTTTGAATTAAAATGTTCTTATCAAAAGTTGTTTAAAT
ACAGTAATTTAGACTACAGACAAGATTTCTGTTCTTATAAATTACGAACA
AAGGTTACGTCAAAAATCAGGTAAAAGAGAGGAAATTGTAAAACACTAAA
ATCTGAATATGTCAGTCAAAACTAAAGATTTTGAGTTCGTTTTTTCTGCA
AAATTTTTTTTACTAATTTAGCTGTCTGGCATAGAATTATGACTGAAATG
ATCTACCAAAGCAGACGTCCCCTTTAACACTGTTCGTACTAGGGGGTTTC
TGTTTGGAAGGGAAACTTTTATGCTAATAGCTCCTGAAATGATAAAGCTT
TGGACATGAAATTTTTACATAAGAATTTTCACACCTTGATATGATGATAT
TGCTGACATTATGTGTCATAGAAATTGATACAGGTCTAATACAAAATAAT
TTTTATGTTAAATGTACATATTTATGTTCAAAACCATTATTTATTGAATA
TTTAGGATAAAATAAGGCTTTTGTACTGGGGAACCCTTTTCTACAGTAAG
GCCTTTGTTTGTTCACACTCTGGAATATAACTATGATTTTTTCGGTTTTT
TAGATAATGTCGAATGGTCAGGAGGAAAGGGATGGAAATGATAATTCATG
TACACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTACTAAAGATCA
TAGAATTTGTAAGTGTTTAGAATTTTCAGCAGAGCTTACTCTATCATAAA
CTAATGAAATGAAAAAAGTCAAACAGGGCCGCCTATAAAAACTGTGGAAA
AGTTTTTGTAGATTAAGTGCCAGTTTGGTTTTCTCTTATTTCAAATAGTG
GCTGTTCCTCAACATTATCCAAACCTTTGTCATTGTGGTGCGTTTGAATG
TTTAGGTCAATATACAATAGAGGGGTAAATTGTGTCTCATCACTATTCTT
ATTCCATCAAATAGAGGGTTAAAATATTATTGAATCAAGTTTTTGGAACT
TTTCCTGAGTTTTCCCATCTTCTATTTTTCTAGGGATCCATTATTTTTGT
AAAAAACCCTGAAGTATTTTTATTTATTTTCTTCGTACTGTTCACTGTTC
TAATCGCATGGATTATTTGTGCTGCTGCATTTGACAACATACAAGGTGGT
TACGTCATAAACGTCAAACCGAGATACATCATTTTTCTCATTATCGGTAT
CTTTTGCTGGATATGGGTCATTTTTGTCATTTTGTTTAATATTTTGGGAT
GTTTCAATAAATGCATTTTCAATCGACTCACAAGATTGTTTGGTTGGGTA
AGAATTTTGAGCACGTTGTTTTTGCCCTGTGGTTTTTTATGAAATTACAG
AGAAAAGAACTTCCCAAGAATACTACGCTACTTAACAGTACGTCTTTTGA
ACTACTAAAGTTGGTCTAAAAAATAATCTGCGATGGAAACAAAAGCTGTA
ACTTTAAATGAAATTCGAACTAAAAAAAGGTTTTTGTGCTTGTTGAAAAG
ATATTCACAAGAGAAATGTTATCAAATACCATTAAAATTTCCAAATTTTG
AAAAGATTCCGCTTTAAAAAGGACTACAGCAACCTCGTACTTCTGGGACC
TTATAATTCGTATTTCGTAAATATGCAACAAATATAATCATCCACTGATC
TTTATAGTGGTGTAATGCATCGAAAGCGCTAGATCTACTTTTGCTTAGAT
ATAAGTGATGTAGCGTAGTCTGTCGTTAGGAAAAGTTGTAACACTACAAT
GTCTTCTAGTTACGGGTACCACTTTCAAAGAAACGCCGATCAACATAAGA
TGGCAGATATAGCTTGGGCCGGGGTTTACAGAAGTCAGTGATATCATCAA
GGGCGTACCAAGACTACTGACAACGAAGTGATTTGATGTGCATGCATTTT
TTTTCAGCACATCTTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTT
GGATGTTTGGATCCATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGA
AATATCGCAGCATCCGTAAGTTCTCTTTTGAAACAAAATATATTTATGAA
TCCTCTCATAGTTTCTTGGATGGTTCAAGCCCCCTATATAATCAACCCCC
CCCCCTAAAGGCCAACTCCCCCCTATATATAAATTTCTCAGGCACAATCC
CACCCCCCCCAAGTGTTAATAACCGAGGTCGTGAACCCTGGGGTAAAATT
TTCGACGGGAATGACACTGAAAATGATAATTTTATTTGGTAAAGAACTTT
GAACCCTATATAACCATATCCTCTCCCCTAAAGGCTGAACCCCCCTAATA
ATGAGACTTTTTCAACCCCCCCCCCCTTACAGGGTTGTCTGAGAATTTGA
AGACCCCCCACCGCTAAACATAGGGGAAATGAAACTATGCCTCTATGAGC
TACGAGTCCAATTATTATATGCCGTTTTAGACTTTTGACTTTGAATTGGA
TTGCTAATTTTGTGCTCGTTGGAAAGGAAAAATTACGAGAAGGATATTAT
CATGTGAAAATCAAACGAGAAAAAAAATTAAATGAAACTATTGATCAAAA
TTGAAAGTTGTTTGCATTTGTAATTTCACTGACAGTTAATTCGAAAAAAA
GTACCTTTGTCTGTATTAATTAACGTCGTGCAAGAGAAATCTTTGTAGGA
CACTATAGATGGTAGATATAACAGTCTCTAAGGTCTACCATTTGGTTCTC
TTTTTTTTGCATCATATAACGAACAACGAGTGGTTTTTTGTACCACAGGA
TATTAAACGACACTAAAGCTTGTCCAAATACATCCAAGAACATTTCAACA
ACAAATTAAAATAAGAATGAGCCATCAGCAATGTTATTTCATGCAAAGAA
AAGGCTTTACATCAACAAAACACAAAGTCTCAGAACTTGCTGACTCTGGC
TGCCTTTTTGTTTATACTCTCTCCGAGAGTTCTGTTTCTAAGAATCGCTT
AAGTGTCTAAAGTACGCTTTGTATCTACAATTATAGTTATATTTAACAAT
TGTAATGTCTTAAGCGCTGTATTTGTTAGTTACATTCTGATAGCGTAAGT
ATCTTATCCATTTATTCTTTTTGTCTTACAGATTTTTGGATTCGTCAACT
CCATTTTATTTTTCATCGATTCAATCATGTATTATCGAAGATGTCGAAAA
TATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATTGAGAATGAGGA
AGAGGAAATTTGAAAAATCTAAAGATGTATTGATTGCATTTGTTTCAATA
TTTACGGAGCTGGTACAAATGGCAATAGCTTTTCCTGTAATGGAGACAGT
TAGTTTATGATTTATCTAGATCCTGACTGATTGTAGATGACAATAGACCT
TATCGGAGTTTTTTATTTTTCTAAAAAAGCGATGCATCGTGG Coding sequence (CDS) from alignment at sc0000085_pilon:104720..112911- >MSTRG.11629.2.p1 ID=MSTRG.11629.2.p1|Name=MSTRG.11629.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000085_pilon:104720..112911- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTTGGATTCGTCAACTCCATTTTATTTTTCATCGATTCAATCATGTA
TTATCGAAGATGTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAG
GTTTGATTGAGAATGAGGAAGAGGAAATTTGACACATCTTTTTATTGGCG
TATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTTGTTAGC
TTGGCATCACAAATTCTGGAGTGGAAATATCGCAGCATCCATGTCGAATG
GTCAGGAGGAAAGGGATGGAAATGATAATTCATGTACACCAAACATAAGA
TTTATTTGTTCTTTTGAAGGCGTACTAAAGATCATAGAATTTATTTTTGG
ATTCGTCAACTCCATTTTATTTTTCATCGATTCAATCATGTATTATCGAA
GATGTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATT
GAGAATGAGGAAGAGGAAATTTGACACATCTTTTTATTGGCGTATTCACT
TAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTTGTTAGCTTGGCATC
ACAAATTCTGGAGTGGAAATATCGCAGCATCCATGTCGAATGGTCAGGAG
GAAAGGGATGGAAATGATAATTCATGTACACCAAACATAAGATTTATTTG
TTCTTTTGAAGGCGTACTAAAGATCATAGAATTTATTTTTGGATTCGTCA
ACTCCATTTTATTTTTCATCGATTCAATCATGTATTATCGAAGATGTCGA
AAATATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATTGAGAATGA
GGAAGAGGAAATTTGACACATCTTTTTATTGGCGTATTCACTTAGTTGGT
TGTTCTTTTGGATGTTTGGATCCATCTTGTTAGCTTGGCATCACAAATTC
TGGAGTGGAAATATCGCAGCATCCATGTCGAATGGTCAGGAGGAAAGGGA
TGGAAATGATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTG
AAGGCGTACTAAAGATCATAGAATTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:104720..112911 - |
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