MSTRG.11616.2.p1 (mRNA) -

Overview
NameMSTRG.11616.2.p1
Unique NameMSTRG.11616.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000084_pilon:1299800..1300885-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11616.2.p1 ID=MSTRG.11616.2.p1|Name=MSTRG.11616.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1086bp|location=Sequence derived from alignment at sc0000084_pilon:1299800..1300885- (Clytia hemisphaerica_ch_hm2_pilon)
AAATTTTATAAAACAGGAAGAGAGTGGTGTATCAAAGTTCTGTTCATTCT
AACATTTTAAGAGGAAGAGATAAGACGTAAAAACAAAACGTTAGTAAAAA
CGATATGGAAAAGAAGAAATTTTGCGTTGAAAATACTGAAGAAGTTTCGA
ATGAGTTTGAATCATTGCAGAAACTATTTCAAGAAAATGAGAATCTTAAA
CAAACTGTTGCCAACTTGGTAAAGAGGTTGTTTATTATAGAAAATCAACA
GAACCATGGAGTTGAAACTTCAGAACAAATCGCCATGAATGAAAGAATGA
AAAGTGTTGAAGAGACCACCAGAATTAATATTGAGAGCATTGGTGATTTA
GATTTGAAATTTCAACTCCATGAAAACTCTGTCAATGACAGTCATTTGAT
TTGGAAGATCAACAATTTTCAGCAACGAACAACTGATGCAGTTATTGGCA
AGACGAGAGCATTGCATTCCGCTCCTTGCTTTACGAGCAAGTATGGATAC
AAGTTTTGTCTAAGGCTGTATCTACACGGTGATGGTATGGGTAAAGGAAC
TCATTTGTCACTTTTCTTGGTTCTTATGAAATCAGAATATGACAACATTT
TAGAATGGCCTTTCCAAAAGAAAATCAAATTCACTTTGATCAATCAAGAA
GACCGAAGTAAAGATCATGTGGAGAAAATGTTTCCAAACAAAGATTCATC
AAGCTTTCAGAAACCAAAGAAAGATATGAACATTGCTTCAGGTTGTCCAA
TGTTTATGAATTTGAACAGACTCAAACCTGAAGGATTTTTAAGGGATGAC
TCTTTATTTGTCGAGGTCAAAATAGATTAATATTATGATAAACACAGCGG
GGTGTGAAAAGATATTTTACAAATAAAAAATAGTTATTCATGTATATTTT
CGTAAATATAACAGAAAATAAAACTTACTAAATTTGAATGAAAAATTTGT
ATGCAATAAATATTATATAATGGAAATACGAAAAATTACGTAAAAATTAT
ATTAAGCATTTTTTAAGATCAATTTTATACACTTTAAAACACAAAAAAGA
AATCTAGGATTTTAGTATTTTTCAAGTAGATTTATC

Coding sequence (CDS) from alignment at sc0000084_pilon:1299800..1300885-

>MSTRG.11616.2.p1 ID=MSTRG.11616.2.p1|Name=MSTRG.11616.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000084_pilon:1299800..1300885- (Clytia hemisphaerica_ch_hm2_pilon)
AATGGCCTTTCCAAAAGAAAATCAAATTCACTTTGATCAATCAAGAAGAC
CGAAGTAAATGGAAAAGAAGAAATTTTGCGTTGAAAATACTGAAGAAGTT
TCGAATGAGTTTGAATCATTGCAGAAACTATTTCAAGAAAATGAGAATCT
TAAACAAACTGTTGCCAACTTGGTAAAGAGGTTGTTTATTATAGAAAATC
AACAGAACCATGGAGTTGAAACTTCAGAACAAATCGCCATGAATGAAAGA
ATGAAAAGTGTTGAAGAGACCACCAGAATTAATATTGAGAGCATTGGTGA
TTTAGATTTGAAATTTCAACTCCATGAAAACTCTGTCAATGACAGTCATT
TGATTTGGAAGATCAACAATTTTCAGCAACGAACAACTGATGCAGTTATT
GGCAAGACGAGAGCATTGCATTCCGCTCCTTGCTTTACGAGCAAAATGGC
CTTTCCAAAAGAAAATCAAATTCACTTTGATCAATCAAGAAGACCGAAGT
AAATGGAAAAGAAGAAATTTTGCGTTGAAAATACTGAAGAAGTTTCGAAT
GAGTTTGAATCATTGCAGAAACTATTTCAAGAAAATGAGAATCTTAAACA
AACTGTTGCCAACTTGGTAAAGAGGTTGTTTATTATAGAAAATCAACAGA
ACCATGGAGTTGAAACTTCAGAACAAATCGCCATGAATGAAAGAATGAAA
AGTGTTGAAGAGACCACCAGAATTAATATTGAGAGCATTGGTGATTTAGA
TTTGAAATTTCAACTCCATGAAAACTCTGTCAATGACAGTCATTTGATTT
GGAAGATCAACAATTTTCAGCAACGAACAACTGATGCAGTTATTGGCAAG
ACGAGAGCATTGCATTCCGCTCCTTGCTTTACGAGCAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11616MSTRG.11616Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11616.2.p1.exon2MSTRG.11616.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11616.2.p1.exon1MSTRG.11616.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11616.2.p1MSTRG.11616.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084_pilongenomesc0000084_pilon:1299800..1300885 -