MSTRG.11604.1.p2 (mRNA) -

Overview
NameMSTRG.11604.1.p2
Unique NameMSTRG.11604.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000084_pilon:1150785..1152797+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11604.1.p2 ID=MSTRG.11604.1.p2|Name=MSTRG.11604.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2013bp|location=Sequence derived from alignment at sc0000084_pilon:1150785..1152797+ (Clytia hemisphaerica_ch_hm2_pilon)
GAATCACTTGTTAACCATTCGATAGAAGAAAAAACCAAGGCACCTTCATT ATCAGATTTCAGTAAACGTGTTGGGACGGCTTGGAGGAAGTTAGATTCCC AGATAAAAAAGGTATTTCTATGAAATTTATTGGTAAACCAAATTTAAATT CAACCAATAAAACTAGCGAACGATTAAAAATAAACGTAAGACTGTAAGAT TTAACATAGTAGAAAAGTCAGAGCTAAAGATTTATACTATTTTGGTGAAT TGCACCAAATCTATACCGTCTTCCGTCCGTCACACTTTTTCCTCTAGGGC TAAGTACAAAAGTGCAACCATCAATTGGTTTGTATTTTCTGAAAGAATAC CATAAAGatacaaaattttaactttatcTCTGATCAAAATATCTTTGATC TTGAAAAAATCTTGTTGTGACGGACGGGACACGGTACAGATTTGGTGCAA TTCACCCATTTTCTccctttgaaataatttttctgaattGTATCGTTAAT TTTCAGGAGTGGAACAAGAAAGCCCAGACAGAGAGAGAAAAAACGCCTGG TTACGAATGTGGCTTGTGTGGCAAattctttaagcaaaaaaaaagaaagc ggTTCCATGAAAAACAATGTGGGGACGAATTATTTTGTTACAGCGAAGGT TGTgggaaaacattcaaaacaaagGATCTTATGAAGAAGCACATGAAAAC CCATGAGGAGAATTATACTTGTAAAATATGCAACAAAAAATTTGGTATAA AGCAAACGTTTTTAACACATGTAAAAAGTCACGAAAAGACTTTCGAATGC GATGCTTGTGGAAAAAGGTTTGGTAGCAAGGGCAACATGGTCAGGCataa caaaaaacatttttgagttCATACTTTAATGTAAATATTTTCGTAACGAA TGCTattctttcaatgaaaataaaacaaacttagATAAAAAAGAATATGC TCAAGTGTTATTCTTCATTGGTCTTACCAACTGATTTAGATTTACATTTT GAAAGGTGTTTCGTTTTGGTACTCATAGTTTTTCCCGCTTTGTGAGGTGC TGCTACATTATTTCTAACGTTGTCCGAAAAGGCATGTGGTCTCTTTCTGG ATGGAATCTTTCCAACAAAGGGATTATTTTTCACTTGTATACCTTTAACT CTTGCATTTCTAGAGCCTGATAGAGATGCGCGCCTTTGAACAGCTCCTGG TTGCACAAAAATCTTACCACGTTTGGCTTTCTTTAGAATAGAGTTTGCGG TAATTTTACGGCTGGTTGTCATAGTGCTTCCAAATGAATGAAATAGGCTT GTCAATCGGGAGGTAGGATACTTTTGAACACGATCACAGAATGTCATTAT TCCATTGAGAAGTGATTGATCATTCTCTCGTACGTCGATTTTGgttatca aatattttgttgCTTTGCGCAGATTAGATCTGCATTCTTCGGCTGATGTT TGCTCGAttctgtttctttgaaattcagaTTGGTCTTGAATAATAATCTT TTCAATTGCAACTGCGTCATTTGTGGTATAACTGTCAGCTTGGTTGTTTG CTTGCTGGGTGTTATCCGAATGAATACCTTCATAATACGAATCGGGTAAT GATTTTCCGATAGCGATGTATGCGTATCCTTTTCTCTCTTCTGCGTTTAG ATAGGGTAAAAAATTTCGGCCTTTGCCAAGCTTATGACTCCACACAACGT ATTGGTGCTTACAGACTGAACCATCTAAACCCACTTCACATGTACAAACA CCAATATCCATGTCAATGGTATAAGTAGAATCGGCATTTGTAAAACTTGG ACAATTATAAACTGACGGACCAACTTGTATGATTTGAGAGGCAAACGACG CTTGACTGACTAAATCAGGTAACCGAAATACCTTTCCACCACTTTTGTTC TTCTTCTCTTTCCGTTTGAATCGTTGAGCATAAACACCGTCGAAACTTCC AGAGGCTACatttaaaagtttaactttGTAATGCTCATTGAGCTCatttg tcattttatcaaa

Coding sequence (CDS) from alignment at sc0000084_pilon:1150785..1152797+

>MSTRG.11604.1.p2 ID=MSTRG.11604.1.p2|Name=MSTRG.11604.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=942bp|location=Sequence derived from alignment at sc0000084_pilon:1150785..1152797+ (Clytia hemisphaerica_ch_hm2_pilon)
GAATCACTTGTTAACCATTCGATAGAAGAAAAAACCAAGGCACCTTCATT
ATCAGATTTCAGTAAACGTGTTGGGACGGCTTGGAGGAAGTTAGATTCCC
AGATAAAAAAGGAGTGGAACAAGAAAGCCCAGACAGAGAGAGAAAAAACG
CCTGGTTACGAATGTGGCTTGTGTGGCAAattctttaagcaaaaaaaaag
aaagcggTTCCATGAAAAACAATGTGGGGACGAATTATTTTGTTACAGCG
AAGGTTGTgggaaaacattcaaaacaaagGATCTTATGAAGAAGCACATG
AAAACCCATGAGGAGAATTATACTTGTAAAATATGCAACAAAAAATTTGG
TATAAAGCAAACGTTTTTAACACATGTAAAAAGTCACGAAAAGACTTTCG
AATGCGATGCTTGTGGAAAAAGGTTTGGTAGCAAGGGCAACATGGTCAGG
CataacaaaaaacatttttgaGAATCACTTGTTAACCATTCGATAGAAGA
AAAAACCAAGGCACCTTCATTATCAGATTTCAGTAAACGTGTTGGGACGG
CTTGGAGGAAGTTAGATTCCCAGATAAAAAAGGAGTGGAACAAGAAAGCC
CAGACAGAGAGAGAAAAAACGCCTGGTTACGAATGTGGCTTGTGTGGCAA
attctttaagcaaaaaaaaagaaagcggTTCCATGAAAAACAATGTGGGG
ACGAATTATTTTGTTACAGCGAAGGTTGTgggaaaacattcaaaacaaag
GATCTTATGAAGAAGCACATGAAAACCCATGAGGAGAATTATACTTGTAA
AATATGCAACAAAAAATTTGGTATAAAGCAAACGTTTTTAACACATGTAA
AAAGTCACGAAAAGACTTTCGAATGCGATGCTTGTGGAAAAAGGTTTGGT
AGCAAGGGCAACATGGTCAGGCataacaaaaaacatttttga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11604MSTRG.11604Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11604.1.p2.exon1MSTRG.11604.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11604.1.p2.exon2MSTRG.11604.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11604.1.p2MSTRG.11604.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084_pilongenomesc0000084_pilon:1150785..1152797 +