|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:1034514..1036750+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11590.1.p1 ID=MSTRG.11590.1.p1|Name=MSTRG.11590.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2237bp|location=Sequence derived from alignment at sc0000084_pilon:1034514..1036750+ (Clytia hemisphaerica_ch_hm2_pilon)
taaggtaaaaaaaaaatgaaaatggaaaaataaataaaaaatgagcATGG
ATGTATCATTTTATATGCACTtggaaaatatcaaaacctcTTACCAATCA
AAAGAGCTATGTATACCAAATGGTTATCAATTTGTTATGGTTCCAAATAT
GTATGTATGGTATGATGTAGGTTAGGACTACTAAATTTCAATGTGTTTGA
ATAAACAACGAGGAAAAAATACTGAGACGTTTGTACAACTACAATAGAGG
AATGATTTCCAGTCCGAACCCTGAATACGCAGTTCAGCTCAGTTCTTCGG
TTAATATGGACCAAGTGGATCTATATCATTTTTACCCATTATTTTAATAT
AATATCTTGGATTTAAGTTCAATACaactcaaaaattgaaattatgtcTG
TTTTTGTCCTTGTTCcaactgaaaatttttgactACTCAtttttttGCTT
CTTAATAATTTTCAGCTAGTCAATCCTTTGAAGATACCTTATCTTATAAC
GAACAATCATTCTGCGATAAGTAAGTTTCGTTAAGTGAACCTTCAAATTG
TGTTCTCCAATTCCTGTGAAGAAGTTTTCTTTGCTAAGATtgatttgttt
aaatttttcaactcCCTCTatgggtcataaattcttgaagtttggactaa
aatttgaaaatttttgctgaaattttggggaaatcatAGTCTCTTCAAGG
GtggcaaaaatgtcaaaaatgtaaaaaacttCCGAAATTTATGTCTctgg
gtcgattttcgaactctCGTCATCTTGTAAACCTAGTATCCACTCCTCCC
CCTTCTGGCATGAAGAATTTCCCGGGCATTAGATTTTCTTATGGAAGATT
TTAAACTTGTTTCTTTTTGCAACGTTTTATTCAATTAGACTTGCGCTCTG
TCAACAAATAAGGATAAAGAAATCCTTTAAGACTAGAGTATCATCATGAA
ATCTTTTCCAGCATTTCAGTATAACGTTTGGAATTTCCTTTACAGGTATC
TAGTGGATGGAAAATACTGGCGAGAAGGTGTCTTTATTATTCAAGACACA
AACACTAAAGAATATGTAGACTATATCATGTCTTGGTTACCCAAACTAGA
TGTAAAGGTAGGACAACTGCACTGGCTGTGTGTCAAGCCGGGTCATCGAG
ACAAAGGTATTGCAACTTGTCTTATTAACCAGGTTTTGTGCTTTTTCAAG
GAGAAGAATTTCGAATCAgtttatttaaaaactgaaacGTTTAGGGATAA
AGCTATTTCTTTGTACAAGAGGTTTGGGTTTAAGGAATATAATGTAATGT
TATGAAGTTGCACAGTAAATAGTTTAGGAattaggccatttcacagtcgc
catgggtaatcaggacggATTGTGTATCCATATCGGCTTCCCGCcgttgg
ctagacgcaaaaatatccaaaaatttagACCGAAAAAGAAATTCGTCATC
ACAACGCTGCGGTGGTCCTGATTACTCATGAttcatttcgatttttttat
ggTCTATTTTTAAGGCCAATGGGAGTAGCTTAGAAAAGTTGACCGAGTGG
TCTAACGGGTCAGCGTCTTATACTATGAGTTCCTGGTTTGAGTCAACGAT
CTTTCCATGTCCCATTCTgatcatagatagccgagctgGTTAACCATAGA
CTCACGGGAAAACAATCGGGAAACTTAACTATCTAAAAGCTCTACTTCAA
GGTCCTCATTAAACGTGTCCTCCGCtttccctaaaattttgcttaggata
taagcatcctaCAAACCATTTTTCAACCTAAACATCTCCGAGcaagtttt
tggatttttgtatgcttaggCGAAACGAATTTGGCctccttttagaaaaa
aaaacatgcccTTGATATCCCCGTGGAACTCTGGAGCGGAAGCACCCTGC
ATTGGAAAGCTTTCAATTGTTATAGAGGACATGTAATTAACAGATTCTAT
TGATAGCTACTAATACATGTACTATTATacaaaatttgggaaatttcttt
caatattgaatttgatttaGAGATTTTATACCTTTTATTGAAGAAGGACC
TACCTTGTACCTATAGATCTAAAGTCTGAGACCGCTATATTTCCTAAGAA
TAAAGGTTAAAGATTTCCAGACGAACCTCGGAAGATCCCGGAAGATCCAG
GCAAATTTCCAGGCTTTTTCTGCTACCGGATAACGGTGGCAGAAACTCaa
tctttgcttgaattttgaaagtcaatCCTAATTTTTG Coding sequence (CDS) from alignment at sc0000084_pilon:1034514..1036750+ >MSTRG.11590.1.p1 ID=MSTRG.11590.1.p1|Name=MSTRG.11590.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1485bp|location=Sequence derived from alignment at sc0000084_pilon:1034514..1036750+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagcATGGATGTATCATTTTATATGCACTtggaaaatatcaaaacctc
TTACCAATCAAAAGAGCTATGTATACCAAATGGTTATCAATTTGTTATGG
TTCCAAATATGTATGTATGGTATGATGTAGCTAGTCAATCCTTTGAAGAT
ACCTTATCTTATAACGAACAATCATTCTGCGATAAGTATCTAGTGGATGG
AAAATACTGGCGAGAAGGTGTCTTTATTATTCAAGACACAAACACTAAAG
AATATGTAGACTATATCATGTCTTGGTTACCCAAACTAGATGTAAAGGTA
GGACAACTGCACTGGCTGTGTGTCAAGCCGGGTCATCGAGACAAAGGTAT
TGCAACTTGTCTTATTAACCAGGTTTTGTGCTTTTTCAAGGAGAAGAATT
TCGAATCAgtttatttaaaaactgaaacGTTTAGGGATAAAGCTATTTCT
TTGTACAAGAGGTTTGGGTTTAAGGAATATAATGTAATGTTATGAatgag
cATGGATGTATCATTTTATATGCACTtggaaaatatcaaaacctcTTACC
AATCAAAAGAGCTATGTATACCAAATGGTTATCAATTTGTTATGGTTCCA
AATATGTATGTATGGTATGATGTAGCTAGTCAATCCTTTGAAGATACCTT
ATCTTATAACGAACAATCATTCTGCGATAAGTATCTAGTGGATGGAAAAT
ACTGGCGAGAAGGTGTCTTTATTATTCAAGACACAAACACTAAAGAATAT
GTAGACTATATCATGTCTTGGTTACCCAAACTAGATGTAAAGGTAGGACA
ACTGCACTGGCTGTGTGTCAAGCCGGGTCATCGAGACAAAGGTATTGCAA
CTTGTCTTATTAACCAGGTTTTGTGCTTTTTCAAGGAGAAGAATTTCGAA
TCAgtttatttaaaaactgaaacGTTTAGGGATAAAGCTATTTCTTTGTA
CAAGAGGTTTGGGTTTAAGGAATATAATGTAATGTTATGAatgagcATGG
ATGTATCATTTTATATGCACTtggaaaatatcaaaacctcTTACCAATCA
AAAGAGCTATGTATACCAAATGGTTATCAATTTGTTATGGTTCCAAATAT
GTATGTATGGTATGATGTAGCTAGTCAATCCTTTGAAGATACCTTATCTT
ATAACGAACAATCATTCTGCGATAAGTATCTAGTGGATGGAAAATACTGG
CGAGAAGGTGTCTTTATTATTCAAGACACAAACACTAAAGAATATGTAGA
CTATATCATGTCTTGGTTACCCAAACTAGATGTAAAGGTAGGACAACTGC
ACTGGCTGTGTGTCAAGCCGGGTCATCGAGACAAAGGTATTGCAACTTGT
CTTATTAACCAGGTTTTGTGCTTTTTCAAGGAGAAGAATTTCGAATCAgt
ttatttaaaaactgaaacGTTTAGGGATAAAGCTATTTCTTTGTACAAGA
GGTTTGGGTTTAAGGAATATAATGTAATGTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:1034514..1036750 + |
|
