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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:914626..920708+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11580.1.p2 ID=MSTRG.11580.1.p2|Name=MSTRG.11580.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6083bp|location=Sequence derived from alignment at sc0000084_pilon:914626..920708+ (Clytia hemisphaerica_ch_hm2_pilon)
caaatttctcaAATCTGGGTGGATTCTACTAGCGTCTGAAGTAAATAGGA
TTAAGTAAATTTAACTAGTATAATTAATGGcatctgtaataaaacaatCA
CTAGCTCAAAGTTGGGGATTGACGGAGACTATTACGCATGCTTTCGTTTT
CGGTTCGTTATTCTAATTTGTGAatgaaaagagatttgttttaacgttta
cattttcttttcagaaaattattCTCCAAAGCAACACAGaaaaaaaaTCG
CTAAATAATCCGTTAGATATCGCTCGAAGGTGTGTTTATGAGAGCAAAAG
AATGACgattggaaaatattttggaatacCTTCTTTACAAAATCTGAACT
ATTGGGAAAAACTAAAAACTCTAAAATTATACAGTCTGGAAAGACGTAGA
GAAAGATACCAAATCATCTACTTGGAATATCTTAGAAAAACATGTTCCAA
ATTTCAATCACTCTGAGAACAAAGGGGGTATCACCTGCTACAAAAACCAG
AGGCTCGGATGAAAATGTCACCTTAAAGAAGTTAATTCAAAGTGCAACAG
AGCGCAAAAATATTTGGAGAGGCTCATTATCTGAAGAAGGACCTAAGCTT
TTCAATTCCCTTCCATGCTACATTCGTAACATCACAAACtgtacaaaaat
taaatttaaaagacAACTTGACCGTTTTCTTTCCACACTACCGGACGAGC
CGGTATTTTTATTATCCCTACAGGAGAGCGGGAGTATGTTTAAATAACAG
TCCTCTTTGTTTCTTTGTCCAACAATTATCAAGGCTTTTCACGATGATCG
CAGTCTCTAAAAGGTTTTCCATGAGCTGTGTAGGGGTTCCAGTACGGTAG
TTTGAGTATGGTTACTTTGAatccaaagaaatattttgttgcATCAAACT
GTGTCGGTTTCCCATGTTTAGCCTCACctgaatcaaataaataaatattt
attaaacagttaataaacaattaaaaatttcaCAGAGGGCAGCCAGGCAA
ATTGACTGACGAGTATCTGCGGTGGTTAAGGGCgtgtttttccaaaaagt
agAGAAGCAGCTGAAAGCACTGTTTTggtaaaaatttccatttttgtcta
aaaatatGCACTGAACTTTTGCTACACTGTAAGTGGACgatcatttttga
gaaaaaagtgggTATCAAATTCAAGTTATAGAACACTGAAGAAAGCTTTT
TATGcagttttttgatatattttcaaCAACTAAAGACTTGAGGGGCACGT
CTTGATAACATAaatacaaaaactaaaaaagaatTGCTAAAATTAATAGT
TTTTAATTACTGACTACCTTAagagaataaattaatgcaagAATTATTTA
ATGCGAATTTGAGcctttttcgcaaaattaaatcccgcaaaacttgaaat
tttccacTGTTTCCATTAATTAattctgaaaaatataaaattaagatgag
aaaaaaaatcaaaacttttatttagtGATCAATGACGAGAAAGAAAGACT
TTtctgtatatttttttgtattgttttaGAATTTCTTTAGTTCATTGTTA
CAAAAAAGGTTTattgaaggaaaaaaacaaTCATTGAAGTCCTCCTCccc
atagtgcggaaaggggtctgaccccccttcttggcatccccccaaccttt
aaaaatgcctatcccccaagggtttcgggttaaatattttctggtaaaaa
gggaagggaaacagtaaagaaaaattaagtctggcaaatataataccact
ttttagtgaaaataaagaacttcctttcatgcagaccaaatttcataaca
gtacTGGAAAATagtctacaatatatgtaagccctcccctccttgctatc
ccccctttttagtgaaaatttctgacccccccttcttcagttttttggaa
ggtgtcatcctccccttaagaaaggggggggtccgaactatgtTCCCACT
AATCAATTTTGCAAACCTTGAAATTTTGGACCCTTCACATTAattttttc
cgcaaaatttaaaatttttggtgtgtcattcgcattaatttattctgcAT
TAAGCAAATATCGCATTAATTTATATTCCCTTTAGGTATTGCATTacaac
aaaaacaagaaaaaggaggtcttgtgtgtgtgtgtgtgtggcacagaaag
agagaaaaaaattgattcccTCGTTTTTCTCTATAATGGTGCTTTTTcaa
aggagaatttttttagaattttcttcataacttttgaatgcGTGAAGTAA
ATTTCAAGCATagttcaaaatttaagaaagtgAAATGTTCAGATATATAC
CATACAATCTCTTAATTGAAACTGGTGcactttttttcaaacacacaaaa
aatttgtcaatttttacctGGAACAGTATTTTGACACGAAAAGAGTTTTG
TCGACTCTTTCAGGAATGAGGTGTTGTATATTCCATAAATGTTTTTGATT
CATGACCATAACTACGTTTGATTCTTTTTGGTTACAAGTTGGTACCTTAA
ATGAAAGATGATTGCAGAAACTATTAACATGCACTACTTTCTACAATCAG
GGTTCCCACagctttcaaaaattcaaatttaaggaGAATATaggattttt
cacttttttgaggaGATTTCTGTAAAAATTTGAGGACTTTTTCATATACT
Tcagtcttgcagttactccttgacactatgtggagtaaatgcaatttttg
acattgttttcagacaccaccacccttgcagttactccttggtTCTCtgg
tgtactaactgatttgaccctcaaaattggtatataccacccccaaaaat
gccaaatttggcaattttttcactgaattcctcatttttgatacagCCTT
ATTGCGGCATGTCTTactaacgaccgttcaagagtttaaatatctcaatc
attttccaagtttgttaaaatatctttcatgattgaaaaaaaaagtgaat
ttttttgcttactattttccaaaaatttcagtTTCTATACCACCTCGGTA
GTAATATTGTCATAGTGTTCCGATAATAAATGCATGACCCTCCTGTATAC
TCATACTTTTAAAGAAATTGAGGAGAATTTTTTGACAGTTAACTTGTCAA
GTTAAAATGCGATTTCTTTTGATGTTAAATTAGCAACACGGTAatgtttt
ttaacaaaaaattcattggTAATGTTTTACATGCAGTAATTATTTTGCTC
TTCCTGAAAAAGATCCTTAAAGACAAGACTTACATGCAAGGGGCGCACAA
AAATTGTCTCctttacacactttttttcagaACAGGAGGCTGAAATTTGA
CCAAAACCTAACAAATTGTCGCAATTTGTGAGCAATTTGAGCCTCAGATT
TAAGAAATTAATAAGAAAGAAAGAGACTAAGCGTATTAACAACATTGtga
gagcctgaaaaattaagaacaactcAGCCCAATCTGAGCTGCATCCCCAC
CTCAAgactttcttaattttttaataattgattTGTGATTTTATCTTATG
AGGAGCTTACGAGGAGCAGAATATTTAGCACCCATTTATGCTAtattaaa
aagttatacatcattggaaagataaatTTAGCAGAATATTTTAGTCAatc
aatttgttttgaaaattgaaaaatgaagtctTCCTATCCCTCCCTTGATG
AGGGATTTTTTCCTACCCCTCCCCTTTGGTGATTTTTGGGAATGCTCTAC
CCCTTCCTTTATAAAGTAGGGTTCACGCCCGTTCACACTATGGAAATTCC
TGGATTTCTgacaaaaaatctatttttagtcCAGACTCTCCCACTAGATA
CAATCGCTAACTTTTTCCAATCGATGACCAATCGATAACCAATTGATGGA
TCGGATATCGATTGGTTACGATAATCGATAGGCAATCGATAATCAGGATT
TTGAGGGAGGtttgattacctatcgattgaTCGATTGGTCATCGACTGGC
TTGTAAATgatcgattgattgtcaattgaCTCTTAAATGATCGATTGGTT
ATTGGTTACTGTAGAACAGATTAATCAATAGCCAATTGATGATAGTTATA
AATTGATGATCAATCGATCAACAATCGATAGGTAATAAATTAGATTACCA
ATTGATGACCAATCGATAATCAGTATTTCAAAGAGGGCTCGATTACCGAT
CGATTATTGGAACCAATCAATATCCAATCCATCGATCGGTTAtcgattgg
aaaaagttatcGATTGTATCGAGTGGGAGATTCTGGTTTAGTGAAAATAT
CTGGAATTTCCGATAGTTATCTGAAAACGTTGACAAATTTTATGGAATTT
CCAAGGGCTCAAATATAAAATTGAGCGAAATTTCTGATAAATCGTCAAGC
CTACCTCAAAATCCTGATCATCAACCTTGCCTATAGTATCAAGTGGGAGG
GTCTGGGTTAACAGTATTTCATATAAAGctaatataaataaataaaaatc
acCTTTAATTAAGTCCATGCACATGTGTAGACAAtccaattctttttcaa
tgtttgGATCGATTGATAAATCATCAGAGGTTTGTGTGGTGAACTTTAAT
ATGTCTCATATCGGATTCGATCAAATTGATTCCATCATATAACATGACGA
TGCACGAAGAGCAAAAGATTCGCTTGCATAAATTGCCGCACTGAATACAG
TGTCTGCAGGTTTCAGCTATTCTCAAATTCAATCGCTTTCTTTGAAAACC
AGCAAACCAAAGTTCAGTAGAGGGAGAAATCTGTTAATGAAAGCaaaatt
gaaagcaaaaattATACCTTTTCTCTTTCTTGTTCTTACAATCCACAGGA
GGATGATTTAAAGTGAAGCCTTGCAGGCAGTCATACTCTCGGTAGATACC
AATGACTTTTGGCTCGTAATTTGTTACAGGTTGCCCACTTTGAAAACAGA
GAACACCGGATTCTCCATTTTCGAATTTTAAAGGGAACAGTTTTCCACTC
ATTGTTTGCAGCAAGATAGTAGGCAGCACAGTACCAAGATGGAAGAAAAG
AGAGCAAAAAGGAAACtgttggaagaaaatttcttacCTCATCACATGTT
CtgacttgaaactttcaaagAATGATCCGGCCCAATTGAACTCAAAAGGA
ACATTTTCGAACTTTGATCCCAAcggatttgattggcttaaagaaaaaca
aaagaatcgaaCAATACATCGAACCGAGCTAGTACGAAATACGTCAtaca
ttcgaaattcaaaaaaaagtggCGCGCGTCAGGGCGGAATGAGGCGGATT
TCCATTATTCGAAGACGAAAAGGAGAATGGGAGCAATAATGGGAacggga
gcaagaatgggatcgggagcaagaatgggatcgggagcaagaatgggaaC
GGGAGCAGAAGAAATTCGAGAGCAAGAATGGGAacgggagcaagaatggg
aacgggagcaagaatgggaacgggagcaagaatgggaacgggagcaagaa
tgggaaCGGGAGCAATAATGGGATcgggagcaagaatgggaacgggagca
ataatgggaacgggagcaagaatgggatcgggagcaagaatgggatcggg
agcaagaatgggaacgggagcaagaatgggaacgggagcaagaatgggat
CGGGATCAAGAATGGGATCGGGATCAAGAATGGGAacgggagcaagaatg
ggaacgggagcaataatgggaacgggagcaataatgggaacgggagcaag
aatgggatcgggagcaagaatgggatCGGGATCAAGAATGGGAACGGGAG
CAATAATGGGAACGGGAGCAATAATGGGAACGGGGAGCAATAATGGGAAC
GGGATCAAGAATGGGAacgggagcaagaatgggaacgggagcaagaatgg
gaacggtagcaagaatgggaacgggagcaagaatgggatcgggagcaaga
atgggatcgggagcaagaatgggatCGGGATCAAGAATGGGAacgggagc
aagaatgggaacgggagcaagaatgggaacgggagcaagaatgggatCGG
GATCAAGAATGGGAacgggagcaagaatgggaacgggagcaagaatggga
acgggagcaagaatgggaacgggagcaagaatg Coding sequence (CDS) from alignment at sc0000084_pilon:914626..920708+ >MSTRG.11580.1.p2 ID=MSTRG.11580.1.p2|Name=MSTRG.11580.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=705bp|location=Sequence derived from alignment at sc0000084_pilon:914626..920708+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAacgggagcaagaatgggaacgggagcaagaatgggaacgggagc
aagaatgggaacgggagcaagaatgggaaCGGGAGCAATAATGGGATcgg
gagcaagaatgggaacgggagcaataatgggaacgggagcaagaatggga
tcgggagcaagaatgggatcgggagcaagaatgggaacgggagcaagaat
gggaacgggagcaagaatgggatCGGGATCAAGAATGGGATCGGGATCAA
GAATGGGAacgggagcaagaatgggaacgggagcaataatgggaacggga
gcaataatgggaacgggagcaagaatgggatcgggagcaagaatgggatC
GGGATCAAGAATGGGAACGGGAGCAATAATGGGAACGGGAGCAATAATGG
GAACGGGGAGCAATAATGGGAACGGGATCAAGAATGGGAacgggagcaag
aatgggaacgggagcaagaatgggaacggtagcaagaatgggaacgggag
caagaatgggatcgggagcaagaatgggatcgggagcaagaatgggatCG
GGATCAAGAATGGGAacgggagcaagaatgggaacgggagcaagaatggg
aacgggagcaagaatgggatCGGGATCAAGAATGGGAacgggagcaagaa
tgggaacgggagcaagaatgggaacgggagcaagaatgggaacgggagca
agaat
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000084_pilon | genome | sc0000084_pilon:914626..920708 + |
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