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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:865766..869708- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11576.1.p1 ID=MSTRG.11576.1.p1|Name=MSTRG.11576.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3943bp|location=Sequence derived from alignment at sc0000084_pilon:865766..869708- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTGGGGAAATCCCCGCGAGCCATTACTGCAGTGTCAGCATTTTTTCC
GCTTCACTCAGCAGAAAAAATCGTGAAAAGTTCTACGAATCCCATGATGA
CAAAATGAAAAAACAAAGATGTTGACAGTCTGAAACCTGACAATGTGGGT
TTTTTTCGAAGCATATTTGGTTAGTATTGCTGATTGGAATATGCAAGATA
AGCAGGTTTTATTTTAATAGTGTTGTTTGTCCTTATCATTTAGTAAAATT
GCTGCTATGAGTGGTTTTTAATGCTGTCCAAAGATTTATTTTATTGCTAA
AATTTGGACTTTCACCATCAATCAAACCAAGAGACTTTTAGCTAAATGGT
TCCTTGAAAGTTTATTTTTCTGGTACCATTGAGAAGTATTGCTAAGTGCT
TAGAATTTACTATTTGTTAAAGACTGTGTCCAATCACTGCACAAGAAAAT
GTCTACTGATCATCAAGAAGCTTCCACGTCAAGCTCAAGGAAAGTATCAA
AACTGTCACATCAAATGTCATTTGAAAATGAAATTTTCGATGAGGAAAAT
GATATAGATGGATCTTTCGGTCTTGAAGAATTATTTAATGAGGAAACCAA
TGAAAATTTGAGTGCTGAGAAGCAAGAGAATATTGAAGGATTACCAGAGC
AGCTACTGTCTATACTTCTTTCTATAAAATCTAGCGAAAACGATAATAAC
GAGAATGACAGTTTGAGTAGCTTGTCAGTGAATGACGAGGGTGACAAGGA
TTTGCCAAATGATGCTGCTGAAAATAACAATGATGATAGTGATACTGATC
AAGGTCCTAATTCAATCAGACGTTTAGTGGTTGAGTCAGAGCCAGGTTAT
CATATATCACCATTTGACCTAAATGAAGATGGGCTGACAAATTGCCAAAT
TTGTTTTGATGTCATGGCCAATAACACAGTTGCATATTGCTCGGATTGTC
AATATCAAATATGTTTTGGATGTCTGTCAAGTCATATTGAGTATCGTGTT
ATGGAAAATGTGATCGAGATCGTTTGTCCAGGTGATGAAAGCTGCGGTAA
AAAATTTTCTGATCAACTCATAGCAGCATTTTCAACAGAACATACAATGA
GCATATTAAACAAAAACAAAGTTGAAGCAGAACAAAACCCAGATGTCAAA
ACTTGTCCTGGTTGTCATAAAATTCAACGAAAAGAAAACATTGTGCAAAA
GAAAAAAGGGAAAAGCAGTTCTCGTATTGAATGTACCTGCGGAACAATAT
GGTGTTTTTCATGTTATTCTCCTTGGCATCATGGCTCCACGTGTGAAGAA
TACCAGAAAGATATAGTCCAGTCTGGAAATAAATCTTTGCGTTATTGGGC
AAAGAGTAGGACAAAAGGAAGCAACAATGCTAAGAAATGTCCGAAATGTT
CATTTTATATTGAAAGAATATCTGGGTGTGATCACATGACATGTAATAGG
TAAGTCTTATGTTTACAACCATAAGTTGGTCTAAGACATCCCTCTTCTAA
TTTTGACACCCTGCTTTAGAGATATGAAAAAATAGGAAGGTCGGAATCAC
TGATAAAAAGAAGATTTTTTCCTCTCTGAATGCTAAAGCGAAGAAAATTA
GTTTCAATCAGCAATTCCAACTTTCCTATTATTCCTATCTCTAAAGAAGG
GGCTGTGGTATAGTGGTCATTGACCTTGGTTGCTGCACAGGCGACTGAGG
TTCAATTCCCACTCGCAGCAGTTCACTTGGCAAGTGAATGAACTTTCGCC
CGGGTCAACCCATGCCATGTGAGGAGAATCGGGTAGTCAGTCCAAGGTGC
TGGCGGGGCGCTCATTGAAAGCGTCTATAGTTGCGAAAATAGGCCTCAAA
GCCTCCTGCAACTCAACCAAATAGAAAAAATAGAAAAAGGGTGTTGAAAT
TAGAAGAGGGATGTCAACATTAGGACCAACTTACGGTACTAAGGAAGGAG
ACCAGTTAAAATATCACTGAAAGTACCATCACCTAACTTCATCATGTAAG
AGGGCAGAATATAAAGGGCTAATAAGTTGAACTTGGAAAGGTGAGGGAAA
ATACCTCAATCAATGGAGGCAAGTTTCTGTACTTTCTTACTGTAAGTTGG
TCTAATGTCGACATCCCGATTTCGACACCCTTCTTTCAGAGATAGAAACA
ATAGGAACCGACAGGAAGGTCAGATATCGCTGATTGGAAACTAATTTTCT
TTGATTAGCGATCAGAGAGGAAAAAATTTTAGTCTATCAGTAATTCCGAC
CTTCCTATTATTTCTATCTATAAAGATGGATGTTGAAATTAGAAAAAGGA
TGTTGACATTAGACCAACTTACGGTATTTGCTAACAAATAAGTCACTTTT
TCTTGTGTTTCCAGGGTTGTGTTTTCAATTTTCTAGTTTGCAAGAATAGG
TGATATGAGGTTTTAAAAAATAAACTTAAAGCCATAAGCTCACAATTAGA
TATTTTTCTGTTTTTCACAGATGTAAAACCGATTTCTGTTATCGCTGTGG
AGGAAAACATTACAGTTTGGGATGGCTTGGCAATCATTATTCAAGATATA
GTTTCTTGGGTTGTAAGTATAATTTGCATCCAAACAAACCAGTTCTAAGA
GTAGCTAAAAGAAGTGGTGTTATTGTAGGTGGTACACTGTTGATGCCTTT
AGCCCTTACTGGTTTGGTTTTGGGGGCTACTCTAGTACTACCTTCAGTTG
TCATTTATAATAAATGCAAGAAGAGGTAATTTGTTGGCAGGAAATACATT
CTGTTGATTTTGTATAATTTTAAAATTTGCTTTTAGTTTTACATTATCAT
ATTTACTTTTTTTGATAGAATTTGATTTTGACAATTTTGCAAAGAATGTC
TTTTGAAGAAGGTTTTGTCTTTTTTTTTCAGATAAAAAGGGTGAATAAAA
ATTACATTGATATTCTCTTTGTATATCAGTACACAAAATATTAGTTTTTT
TAAATGAAAATTTATGGGAAGTAACTGATTTAGTTTTTTAATATTTAGAT
TGTAAAGGAATTTATGACACATTAATATTTTCTTATTTTCTTATACATTT
CTTGCTTCTGCTTTTTGTCGGGAAGGAATTCTTGCTTTAGACTGAGACTG
ATTCTAAAATCTAAAATGTCAATTGCATCATCACCATTGTAAGAATGTGA
CATTACATTATTATGACACATTGCCTAGCATCTGTTTATCGAAAACTTGG
TACCTAGGCAAATGAAAGGGTGTGGGATGGGTATGGCCTTAAGGCTGTTT
TTTTCTAACATGACAGCCGCTGTAACAGTTGGTTGGAAAAATCAGAGTCT
CACTAAAAGTTGGAAAAATGGAAACAATTTCAACTATTTGATTCTTTAAG
GATAAAAATTGATCAAATTAGTCCCAATAAGGGTCGTAAAATTCCCAAAA
ATTTCCTCCTTATAGTCCTGCTAAGGCTCCAAAGGACATACCCATCAGCT
CACCACCCTAGTAACCTCCCCCCTTAATCAAAGGTTATGAAAGGTTTGAA
GTTTTGGATGCATGTTGTTTTTCCTCTTTCAATAGTGGCATAAATTTATT
TTTAATAATATAGTAAATAGAACATTATTTTTTGTTTGTTGCGTGTATTT
AGTATTTTCATTGTTATTTTTTAAAGAATTTTGTTTAAAATTTTGTTCAT
TAATTTATATTATGGTTTTGGGTCTGCCAATAAAAGGCATTTTTATACTC
AATCACAATTTCTTAGGAATTTCTTAAAAAAGAAAATAATTTGACTACTT
GTATTTTTTTCTTCCGCTGTAAATAGTATGCGATTATTGTAGAGCTAAGA
TTTGTTGCTGGTATGAAAATAACTTCTGTGAAACAGAAACAATCCAATAT
TTTGAATATTTGGCCCAATAACATTTTTAGCCATTAGGTTATTAGTAAAT
TACATTTTTACACTGTGCAGGGTAGGGGTATTGAGGAACTCTA Coding sequence (CDS) from alignment at sc0000084_pilon:865766..869708- >MSTRG.11576.1.p1 ID=MSTRG.11576.1.p1|Name=MSTRG.11576.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2520bp|location=Sequence derived from alignment at sc0000084_pilon:865766..869708- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTAAAACCGATTTCTGTTATCGCTGTGGAGGAAAACATTACAGTTTGG
GATGGCTTGGCAATCATTATTCAAGATATAGTTTCTTGGGTTGTAAGTAT
AATTTGCATCCAAACAAACCAGTTCTAAGAGTAGCTAAAAGAAGTGGTGT
TATTGTAGGTGGTACACTGTTGATGCCTTTAGCCCTTACTGGTTTGGTTT
TGGGGGCTACTCTAGTACTACCTTCAGTTGTCATTTATAATAAATGCAAG
AAGAGGTAAATGTCTACTGATCATCAAGAAGCTTCCACGTCAAGCTCAAG
GAAAGTATCAAAACTGTCACATCAAATGTCATTTGAAAATGAAATTTTCG
ATGAGGAAAATGATATAGATGGATCTTTCGGTCTTGAAGAATTATTTAAT
GAGGAAACCAATGAAAATTTGAGTGCTGAGAAGCAAGAGAATATTGAAGG
ATTACCAGAGCAGCTACTGTCTATACTTCTTTCTATAAAATCTAGCGAAA
ACGATAATAACGAGAATGACAGTTTGAGTAGCTTGTCAGTGAATGACGAG
GGTGACAAGGATTTGCCAAATGATGCTGCTGAAAATAACAATGATGATAG
TGATACTGATCAAGGTCCTAATTCAATCAGACGTTTAGTGGTTGAGTCAG
AGCCAGGTTATCATATATCACCATTTGACCTAAATGAAGATGGGCTGACA
AATTGCCAAATTTGTTTTGATGTCATGGCCAATAACACAGTTGCATATTG
CTCGGATTGTCAATATCAAATATGTTTTGGATGTCTGTCAAGTCATATTG
AGTATCGTGTTATGGAAAATGTGATCGAGATCGTTTGTCCAGGTGATGAA
AGCTGCGGTAAAAAATTTTCTGATCAACTCATAGCAGCATTTTCAACAGA
ACATACAATGAGCATATTAAACAAAAACAAAGTTGAAGCAGAACAAAACC
CAGATGTCAAAACTTGTCCTGGTTGTCATAAAATTCAACGAAAAGAAAAC
ATTGTGCAAAAGAAAAAAGGGAAAAGCAGTTCTCGTATTGAATGTACCTG
CGGAACAATATGGTGTTTTTCATGTTATTCTCCTTGGCATCATGGCTCCA
CGTGTGAAGAATACCAGAAAGATATAGTCCAGTCTGGAAATAAATCTTTG
CGTTATTGGGCAAAGAGTAGGACAAAAGGAAGCAACAATGCTAAGAAATG
TCCGAAATGTTCATTTTATATTGAAAGAATATCTGGGTGTGATCACATGA
CATGTAATAGATGTAAAACCGATTTCTGTTATCGCTGTGGAGGAAAACAT
TACAGTTTGGGATGGCTTGGCAATCATTATTCAAGATATAGTTTCTTGGG
TTGTAAGTATAATTTGCATCCAAACAAACCAGTTCTAAGAGTAGCTAAAA
GAAGTGGTGTTATTGTAGGTGGTACACTGTTGATGCCTTTAGCCCTTACT
GGTTTGGTTTTGGGGGCTACTCTAGTACTACCTTCAGTTGTCATTTATAA
TAAATGCAAGAAGAGGTAAATGTCTACTGATCATCAAGAAGCTTCCACGT
CAAGCTCAAGGAAAGTATCAAAACTGTCACATCAAATGTCATTTGAAAAT
GAAATTTTCGATGAGGAAAATGATATAGATGGATCTTTCGGTCTTGAAGA
ATTATTTAATGAGGAAACCAATGAAAATTTGAGTGCTGAGAAGCAAGAGA
ATATTGAAGGATTACCAGAGCAGCTACTGTCTATACTTCTTTCTATAAAA
TCTAGCGAAAACGATAATAACGAGAATGACAGTTTGAGTAGCTTGTCAGT
GAATGACGAGGGTGACAAGGATTTGCCAAATGATGCTGCTGAAAATAACA
ATGATGATAGTGATACTGATCAAGGTCCTAATTCAATCAGACGTTTAGTG
GTTGAGTCAGAGCCAGGTTATCATATATCACCATTTGACCTAAATGAAGA
TGGGCTGACAAATTGCCAAATTTGTTTTGATGTCATGGCCAATAACACAG
TTGCATATTGCTCGGATTGTCAATATCAAATATGTTTTGGATGTCTGTCA
AGTCATATTGAGTATCGTGTTATGGAAAATGTGATCGAGATCGTTTGTCC
AGGTGATGAAAGCTGCGGTAAAAAATTTTCTGATCAACTCATAGCAGCAT
TTTCAACAGAACATACAATGAGCATATTAAACAAAAACAAAGTTGAAGCA
GAACAAAACCCAGATGTCAAAACTTGTCCTGGTTGTCATAAAATTCAACG
AAAAGAAAACATTGTGCAAAAGAAAAAAGGGAAAAGCAGTTCTCGTATTG
AATGTACCTGCGGAACAATATGGTGTTTTTCATGTTATTCTCCTTGGCAT
CATGGCTCCACGTGTGAAGAATACCAGAAAGATATAGTCCAGTCTGGAAA
TAAATCTTTGCGTTATTGGGCAAAGAGTAGGACAAAAGGAAGCAACAATG
CTAAGAAATGTCCGAAATGTTCATTTTATATTGAAAGAATATCTGGGTGT
GATCACATGACATGTAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:865766..869708 - |
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