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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:836626..839761+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11573.2.p2 ID=MSTRG.11573.2.p2|Name=MSTRG.11573.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3136bp|location=Sequence derived from alignment at sc0000084_pilon:836626..839761+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCCGACTAGGTCTTCTTGTTTGCATCTTTTGTATGAAAGCCCATTATCT
TTCATTTATAGACGTGTTGTATTGGATGGTGTCAACATTGAAGTGCGTTT
CGGACAAGGGGCTTATTTCGTCAATTTCGTGCAAGAATTACGTGAAATCA
TGGACAAAAAGGGGGAAGGCCGTGAATATATGATTACAGCCAACCCGAGC
TGCGTTCATCCGTCTTATATTCTAGATGAGTCTTTCTCAAAAGCTATCAC
AAGCTTCGATCACTTATATGTCAATTTTGATGACGAACAATGTCATATTA
ATAAACCATCAGGGTTTGAATCAGCTTTCCAAGTTTGGTATGATTATGCT
GTTCGAAATGGTGGACCAAAAATTTGGGTTGGACTTCCGTCTGATCCGAG
AAACACAAGAACATCAGAGCATTATCTGAAAAGAGTCAATGCTAAGAATA
AACTAGAGGTAAGATTACATATCACAATATTATTTATTCATgaatatgca
ccactggagagtcttccgagaatttttaaaattttccacccaatacgtca
cttaaacgaTAGAAAAATTGGGTGGAAAattcagaagactctccagtggt
gtatatcatgaatagatcCACTTTACATTGCTCTATCACGTTAAAAGCGT
GTCAACGTAATACGACTAATTCCCTCGAAAATGGCTTGCATATGATATAA
TATATCACATATTATGTGCTTGTGCAAGTGCACACTTAAAAAGAACGAAC
TTTAGCAAATTTACCGcgcagaaattaaaaaaaaagttcttcACGATTTA
TTAAAAAACTGTAATTGCTAGTTGAAGAGTTCTGTCTATTGTTGCGTATT
TAGGTTCATTACATAATCTTGCATCAATGCCATATCTGAATAGATCTGAC
TTCgtttaaaagatatttataagtctgacatttatttttttgattattaC
AAAATCTTGCAAAGAATTATCTAAAATTCGGGTGAGTGTTGTTTAAATGA
CGtcagttggaaagatatttataAGTCTGACATTTCTATTTCAATTATTA
CAGAATCTTGCAAAGAATTATCTAAAATTCGGGTGAGTGTTGTTTAAATG
ACGtcagttggaaagatatttataagtctgacatttctattttaattaTT
ACAGAATCTTGCAAAGAATTATCCAAAATTCGGTGGAGTGATGTTAAATG
ACGTCAGTTGGGATATGGAAAATCAAGTTTTAAGCGTCCACTACAGTCAA
TATATAGGTAGCGTTTTGCGACCTGGTCGTCTCCCAGGGCAACCAGACCT
TGTTACTACGAAAGCACCAGTTACTAGGACAGTGACGGATAAGAAAGGAG
GTGTATCGGTGATTATTGTGAAACAAACGACAAGAAGAGTTTGGGTACGA
CCCACTGGTCCTGTACAGCTCGGTGGATCAGCAGGTAGGTCAACGTTTTT
AGATTCTGTTTCCAGTAGGTTTAcaaactgacggtatgtgcggcggaaaa
acagcttttagaatcgcacccttacagtgcaccaaaaaatcaatgaaatt
cgtacccttacagtgcatttttctcaaattttcaaatctttttgagtaaa
aaattagaattttcttgcaaaaatttggaatttttcctgaatttgcaaaa
atttccacccctACAGTGTATTTCTGctatatcaaaaaatataatcttaA
CCGCCACATATACTCGCTGTTCATATAGTTCGTTCCGTTGGTCTTTTATT
CCCTGAAACCTTTCTTGCTTTATTTATATTCATTAGattccaatttcttt
ttcataagTATCGATTTTTAATTCTCTATCAGTAGCTCTTCTCTTTGTAC
CTGGCTTGTTTATAGAGCAGATTTTCTCACACCAACCCCAACAACTAATG
AACACTAACAAGGGCATaagcggttttagaccatgtcgaacttatcagag
gaaaagatttgtaattgtaatttcactgttttttaacgtgcgttgcactc
cttcgcatgatTCCGACGTACTTAGTCTACCGGgtgcgtcagaaaaaact
ttggacgtttggtgagccactgggaccgagcaaagtctttttgaaactca
aaaccacttttattagaaagaggatagtctaacttaaattttgaggtata
gcTTTTTAAGTTGGGTAAAGTAtttctcaagttataagcttttgaagtta
aaattcactttcgaaaagtgtaaaagaacgtcaaaaatgggTAATTAAAA
TGTTGTGACAATAGACAGTGTTGTCGCGGCATTTTgagaaagagagattt
ttttCCATACATCACACTCTTCACAGATAGATTCTctcaaaaattcacca
aaataaaatttttaattgttgTTTTACAAATTCCCGCTCTGGTATGTTTT
ATTACCCAGTGGAAACATTAATGACATCGTTAAAAACGTGCAAATcagaa
caaaagagaaagagagaggaCAAATTTAATTAcctgtttttgatgcattt
ttgctctttttgataagtaattttgagcttcaaatagcaatatctcaaaa
agttttatttcaaatttaatgaatgatacctcaaaatttaagttagacta
tcctctttctaataaaagtggttttgagtttcaaaaagactttgctcggt
cccagtggctcaccaaacgtccaaagttttttctgacgcacCCGGTAATG
TCTTAAATTCGCCAGTGAAGGGCTCTTATTAATTAGAGCCTCGTCCAGCA
GGAACGCCTGTGACAACAGGTTTCCTGTCTAGACAGAGATCATGCTTTCT
TGTTGTATCAATtactttatttgatttttttgtttattttagccAATGTC
TATCCAGGAAAGGTGCTGACCATAATTTGTATTACCATGGTTACAGTGTT
GCTGATGAAATTCTTACGGTAACCGATTTTGGATtggagagaaaatattt
ttgtaattaatatGTAAAAACGAtatttttcttagttttccactatttta
agttttcggttcctttattcattttagttttattttcaaaattttagtat
ttcaatattatttaaagaaagaatttttaaattttatttttgaaaatttt
gtaactcttagtttctttaaagctctttttaTACGA Coding sequence (CDS) from alignment at sc0000084_pilon:836626..839761+ >MSTRG.11573.2.p2 ID=MSTRG.11573.2.p2|Name=MSTRG.11573.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=648bp|location=Sequence derived from alignment at sc0000084_pilon:836626..839761+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAATGACGTCAGTTGGGATATGGAAAATCAAGTTTTAAGCGTCCA
CTACAGTCAATATATAGGTAGCGTTTTGCGACCTGGTCGTCTCCCAGGGC
AACCAGACCTTGTTACTACGAAAGCACCAGTTACTAGGACAGTGACGGAT
AAGAAAGGAGGTGTATCGGTGATTATTGTGAAACAAACGACAAGAAGAGT
TTGGGTACGACCCACTGGTCCTGTACAGCTCGGTGGATCAGCAGccAATG
TCTATCCAGGAAAGGTGCTGACCATAATTTGTATTACCATGGTTACAGTG
TTGCTGATGAAATTCTTACGGTAAATGTTAAATGACGTCAGTTGGGATAT
GGAAAATCAAGTTTTAAGCGTCCACTACAGTCAATATATAGGTAGCGTTT
TGCGACCTGGTCGTCTCCCAGGGCAACCAGACCTTGTTACTACGAAAGCA
CCAGTTACTAGGACAGTGACGGATAAGAAAGGAGGTGTATCGGTGATTAT
TGTGAAACAAACGACAAGAAGAGTTTGGGTACGACCCACTGGTCCTGTAC
AGCTCGGTGGATCAGCAGccAATGTCTATCCAGGAAAGGTGCTGACCATA
ATTTGTATTACCATGGTTACAGTGTTGCTGATGAAATTCTTACGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:836626..839761 + |
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