MSTRG.11563.1.p1 (mRNA) -

Overview
NameMSTRG.11563.1.p1
Unique NameMSTRG.11563.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000084_pilon:612864..613464+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11563.1.p1 ID=MSTRG.11563.1.p1|Name=MSTRG.11563.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=601bp|location=Sequence derived from alignment at sc0000084_pilon:612864..613464+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACCCTTTTGCTAAAGGtttttatcatttctttttttaattttttatgt
gTTCAAATTGAAACATAATATAGCCCCTTAAACATAATCTTCTCAAAAAG
AGTTTCTTGAAGTAATAATTCACTTTCTTCATACATTTCATTTTCCCCTT
CCTGGCACTTTAAAAACGATAATATGATATatcttttctaatttttaaaa
cTCTTTTTAGGCTATAAGTCTGCTTTGAGGTTTCCAATCCAATTAAACTT
CTTGGATGAAGCATCGGCATACatcaaatgtttgaaaaatcaagatgGAA
AGTTGATGGTTTCATCCAATAGGAAAACTGGTTTTATTGGGTTTCTTGCC
TGTATCCAGAGTGCTAAAGATCTTTTTCACAAGCTTGTTGGATGTCCAAA
CCCACCAATGAAATACCTCTTAATGTACAAATTTTCCCAAGACCACCTTG
AATTGTTTTTTGGTGCAGTGCGTCAAGCTGGTGGCTTCAACAACAATCCA
ACTGTCAAGCAATTTACTGCCTCATACAAACGACTTCTGATGCGGAGTCA
TAACAAAGGTAGTATTAATTATCAAATGCAGTGATTCAGTACCAAAATCT
C

Coding sequence (CDS) from alignment at sc0000084_pilon:612864..613464+

>MSTRG.11563.1.p1 ID=MSTRG.11563.1.p1|Name=MSTRG.11563.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=780bp|location=Sequence derived from alignment at sc0000084_pilon:612864..613464+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCCTTTTGCTAAAGGCTATAAGTCTGCTTTGAGGTTTCCAATCCAATT
AAACTTCTTGGATGAAGCATCGGCATACatcaaatgtttgaaaaatcaag
atgGAAAGTTGATGGTTTCATCCAATAGGAAAACTGGTTTTATTGGGTTT
CTTGCCTGTATCCAGAGTGCTAAAGATCTTTTTCACAAGCTTGTTGGATG
TCCAAACCCACCAATGAAATACCTCTTAATGTACAAATTTTCCCAAGACC
ACCTTGAATTGTTTTTTGGTGCAGTGCGTCAAGCTGGTGGCTTCAACAAC
AATCCAACTGTCAAGCAATTTACTGCCTCATACAAACGACTTCTGATGCG
GAGTCATAACAAAGGTAGTATTAATTATCAAATGCAGTGAAACCCTTTTG
CTAAAGGCTATAAGTCTGCTTTGAGGTTTCCAATCCAATTAAACTTCTTG
GATGAAGCATCGGCATACatcaaatgtttgaaaaatcaagatgGAAAGTT
GATGGTTTCATCCAATAGGAAAACTGGTTTTATTGGGTTTCTTGCCTGTA
TCCAGAGTGCTAAAGATCTTTTTCACAAGCTTGTTGGATGTCCAAACCCA
CCAATGAAATACCTCTTAATGTACAAATTTTCCCAAGACCACCTTGAATT
GTTTTTTGGTGCAGTGCGTCAAGCTGGTGGCTTCAACAACAATCCAACTG
TCAAGCAATTTACTGCCTCATACAAACGACTTCTGATGCGGAGTCATAAC
AAAGGTAGTATTAATTATCAAATGCAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11563MSTRG.11563Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11563.1.p1.exon1MSTRG.11563.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11563.1.p1.exon2MSTRG.11563.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11563.1.p1MSTRG.11563.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084_pilongenomesc0000084_pilon:612864..613464 +