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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:391932..394902- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11559.1.p1 ID=MSTRG.11559.1.p1|Name=MSTRG.11559.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2971bp|location=Sequence derived from alignment at sc0000084_pilon:391932..394902- (Clytia hemisphaerica_ch_hm2_pilon)
AACAAAAATCATTGTTTGTAAAGTACCTAGAGATGGTGAAAGCAAGTGAT
ATCAGAAGCGAATAACGATGGGCAGGGCCAAAGTTTTGAAGAATATAAAT
GCAGTATTAGAGGATAACCACACAGTCGTCAAGTGACAGGAGTTTCAGAA
ATCACAAAGTAGAAGCTTATAATCGAGAAAAAGTCACAAAGAAATTTTGA
TACTGTAAGAAAGAAAATGAAAACTAACGGTTGTTGTAATGCAGTGTGTA
AAGAAATGATTGACGAGGTAAAGATTGAAAATTAAAATTTAATACATACA
GTATAACACACTCTATAATTCGACCTGGAAGGGATCAGAAGTTTTCTTCG
AACTATGAGAAGCCTTTTGTAACCCAGATGGCACACAACGTTGTTTCATG
GACGTTGTGAATGTTAGAAAAACGTTGAAACAACGTTGTGTGCCAGCTGG
GAAGGTTTATCAAGCTGAGGCATCGTTTTACTTTAAAACAGACTCGGAAA
GATTCGAACAATGTGTTTCAATTCTGACAAAAATGTCAATCTACTGACAA
TGGTGAACAGATCGCTTTGAACCAGGCGATCAACGGGTTTTTTAACGAGT
TTCCAAAAATGAAAAATTTCACGACGATAAGATTTAGACAAATTGAATAA
AGCTATCACATCTAATTCAAGTGACATTAAGTTTACAGGTCTTTATAGTT
CAACGAGCTTCCTTATTTTCTATCTCTAACAGTTGCTTGAAGTGAATCGT
ATTTGGAAGAATGATTATGACAATTTGAAGCAAGAAAACGGACGGTTGAA
AGCATTATTAAGAATGGAAAACACTGGAAACATGGACGATGGAATGATTG
AGTTTGGAAAAGGTCTGGATCGTGGAAGTGGTGATTGTCTTCAGCAAAGA
TCCGGTGAAGACTTCCAAAAAACGATTGAAAATATTCGCATATTGGAAGA
ACAGGTAAGCAATTTCACTGCTTTGAATGCTTTACATTTAAAATCTAACT
CTTAATGTTATATTCAATACACCCCTGTTTCACAGCCCGGTGGGACCCAT
AACCAACTGTAAAACTTAGCCTAAACCATCCACAATGAATCGTTTGACCT
AGGAACAATAGAATTTTTACCCCCATTGAGATTTCAATTAAAAGAATTTC
GTCCCACTGTGGGAATAAGTCTGACCGGATCTGTAAGACAGGGGGTGTTT
CATATTTCGCAAAAATCAGCCGGGGAAAATTTTAAGCTTCGTTGTAGTAC
ATAAAACATCCGGGAAAGAAAAATAAATCGTTTTTAATTAAGTGAAAATA
GATTTTTTTGTTCTTCAACTGCGGATACCCTTTTCCTTTTGAAAGATAAA
ATTATTATATTACGATTAAATGTCAAGTAAAAAGTTTAAAAGCTGAAAAA
GTCTGTTCACAAAGATCACAGAGGAGAGCAGAAATAAATATGCGCGCGAT
GTACTGTTTTATTCTTAGAAAAACTATTGTTTTTTTCTCACGGCGAGCCA
ACCAAAAGAAAAAACTAGAAATTCTCAGAAACCCCAACAGAATTTTCACA
AAATTGTGTTAAAAGTAATAAAATTGTAATAAAAGATTTCTGGGAAATGT
AGATACTGTCGATTAATATATGTAGGCAAAGTCTGCAAAGAAATTCCATG
ATTCACATAAATTATCAGAATATTTTTTCAGACCCTTATTTTTGTAGGAG
CTCGGTAATGAGACCCGATTAACAAAATTATTATTTTTCATTTCTAGCTT
CAACATTTAAAAAATAAATGCGAAAGAGAGCGAGAAGAAAAGCAAAGAGA
AATTTTAAAGAACGAAAATCTGAAAAGTAAATTGGCAGAAAATGAAGAAG
TTACATTTCAGTTACATCAAACGATTGACGTCTTACAGAAGAAAATAAAG
ACAGAGGAAATTACGAAGACAAACATATGGGGAGGATGCAATTGCGAACA
GAAAAGAAAGGTAACACTAAAATTATATTGATTCTGAAGATATTAGATAA
ATGATAATACAGCGGATTAAAATGGGAATGTCTTGTATTTGAATTCTCTG
AAAGAGCTAAAATATAGCTTTTGCATGCTTTATAGTGTTTTGAGAAAGTC
TTTTTCAAATGCTGCAGTCTTACTGACGAATCCTTTTTTAAATTTCAAAT
TAATTTTCAAATTTTCTATAATTTCAGGCTAGACTAATGGGGCGAGGTGC
TTTCCCGAGAAACGAGCATGGTTTCACTGGATATAAAGACGAAAGGGATT
CCATGACAACGGAATATCAACAAAGTAAAAATATCATGGTAACACATGGA
CAATTTGACCCATTCTTTCCAATCTTTTGACAAATAACAGCTAATGTCAG
AGGCCTTAGAGGCACTACTATCTAGGTATCTATTAAATTTAGAATCGAAA
AATGTATTCCACATACAATGGAAAGAATCTTTTATTGTAGTTTTACGAAA
TGTATATAAAATCCAAATCCCTGTATTCAAAGATTATCACATACAGTGGA
AATAATCTTTTATTGTAATTTTACGAAATGTATATAAAATCCAAAACCCT
GTATTCAAAGATTATATAAGGCTGTACATGTTTTTTGGATGTCCAAGAGT
ACTTGCTTCTTGATGATAATCTTACAGTAATAGATTTTAATAAATAGTAA
TAAATTTTAAACTTAATAATTTGAAAATAACGATATTTTTATTTATAATT
ACCTTCTTGTTCACTTTGAATTACTATTTAATAGTTGCATTTTTTATTTT
TATCATATATTATTCTAGATAATAATGATGATATTGTATGTATAATACGT
TATTTCTATGCTTAAATTGAAAAACCATAATACGTCTCTATTTATTGATT
GAGAATACTACCAGAAAAAAGTAGTAGACAATAATATTTTAGGTATCCAG
GTTTTATTAAGCCATTGTGGGAGACCGAAGTTTGGTGTGTCCTTACATTC
TACTCCTGCCCCTAAAATCTA Coding sequence (CDS) from alignment at sc0000084_pilon:391932..394902- >MSTRG.11559.1.p1 ID=MSTRG.11559.1.p1|Name=MSTRG.11559.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2556bp|location=Sequence derived from alignment at sc0000084_pilon:391932..394902- (Clytia hemisphaerica_ch_hm2_pilon)
GCTAGACTAATGGGGCGAGGTGCTTTCCCGAGAAACGAGCATGGTTTCAC
TGGATATAAAGACGAAAGGGATTCCATGACAACGGAATATCAACAAAGTA
AAAATATCATGGTAACACATGGACAATTTGACCCATTCTTTCCAATCTTT
TGACTTCAACATTTAAAAAATAAATGCGAAAGAGAGCGAGAAGAAAAGCA
AAGAGAAATTTTAAAGAACGAAAATCTGAAAAGTAAATTGGCAGAAAATG
AAGAAGTTACATTTCAGTTACATCAAACGATTGACGTCTTACAGAAGAAA
ATAAAGACAGAGGAAATTACGAAGACAAACATATGGGGAGGATGCAATTG
CGAACAGAAAAGAAAGTTGCTTGAAGTGAATCGTATTTGGAAGAATGATT
ATGACAATTTGAAGCAAGAAAACGGACGGTTGAAAGCATTATTAAGAATG
GAAAACACTGGAAACATGGACGATGGAATGATTGAGTTTGGAAAAGGTCT
GGATCGTGGAAGTGGTGATTGTCTTCAGCAAAGATCCGGTGAAGACTTCC
AAAAAACGATTGAAAATATTCGCATATTGGAAGAACAGATGAAAACTAAC
GGTTGTTGTAATGCAGTGTGTAAAGAAATGATTGACGAGGCTAGACTAAT
GGGGCGAGGTGCTTTCCCGAGAAACGAGCATGGTTTCACTGGATATAAAG
ACGAAAGGGATTCCATGACAACGGAATATCAACAAAGTAAAAATATCATG
GTAACACATGGACAATTTGACCCATTCTTTCCAATCTTTTGACTTCAACA
TTTAAAAAATAAATGCGAAAGAGAGCGAGAAGAAAAGCAAAGAGAAATTT
TAAAGAACGAAAATCTGAAAAGTAAATTGGCAGAAAATGAAGAAGTTACA
TTTCAGTTACATCAAACGATTGACGTCTTACAGAAGAAAATAAAGACAGA
GGAAATTACGAAGACAAACATATGGGGAGGATGCAATTGCGAACAGAAAA
GAAAGTTGCTTGAAGTGAATCGTATTTGGAAGAATGATTATGACAATTTG
AAGCAAGAAAACGGACGGTTGAAAGCATTATTAAGAATGGAAAACACTGG
AAACATGGACGATGGAATGATTGAGTTTGGAAAAGGTCTGGATCGTGGAA
GTGGTGATTGTCTTCAGCAAAGATCCGGTGAAGACTTCCAAAAAACGATT
GAAAATATTCGCATATTGGAAGAACAGATGAAAACTAACGGTTGTTGTAA
TGCAGTGTGTAAAGAAATGATTGACGAGGCTAGACTAATGGGGCGAGGTG
CTTTCCCGAGAAACGAGCATGGTTTCACTGGATATAAAGACGAAAGGGAT
TCCATGACAACGGAATATCAACAAAGTAAAAATATCATGGTAACACATGG
ACAATTTGACCCATTCTTTCCAATCTTTTGACTTCAACATTTAAAAAATA
AATGCGAAAGAGAGCGAGAAGAAAAGCAAAGAGAAATTTTAAAGAACGAA
AATCTGAAAAGTAAATTGGCAGAAAATGAAGAAGTTACATTTCAGTTACA
TCAAACGATTGACGTCTTACAGAAGAAAATAAAGACAGAGGAAATTACGA
AGACAAACATATGGGGAGGATGCAATTGCGAACAGAAAAGAAAGTTGCTT
GAAGTGAATCGTATTTGGAAGAATGATTATGACAATTTGAAGCAAGAAAA
CGGACGGTTGAAAGCATTATTAAGAATGGAAAACACTGGAAACATGGACG
ATGGAATGATTGAGTTTGGAAAAGGTCTGGATCGTGGAAGTGGTGATTGT
CTTCAGCAAAGATCCGGTGAAGACTTCCAAAAAACGATTGAAAATATTCG
CATATTGGAAGAACAGATGAAAACTAACGGTTGTTGTAATGCAGTGTGTA
AAGAAATGATTGACGAGGCTAGACTAATGGGGCGAGGTGCTTTCCCGAGA
AACGAGCATGGTTTCACTGGATATAAAGACGAAAGGGATTCCATGACAAC
GGAATATCAACAAAGTAAAAATATCATGGTAACACATGGACAATTTGACC
CATTCTTTCCAATCTTTTGACTTCAACATTTAAAAAATAAATGCGAAAGA
GAGCGAGAAGAAAAGCAAAGAGAAATTTTAAAGAACGAAAATCTGAAAAG
TAAATTGGCAGAAAATGAAGAAGTTACATTTCAGTTACATCAAACGATTG
ACGTCTTACAGAAGAAAATAAAGACAGAGGAAATTACGAAGACAAACATA
TGGGGAGGATGCAATTGCGAACAGAAAAGAAAGTTGCTTGAAGTGAATCG
TATTTGGAAGAATGATTATGACAATTTGAAGCAAGAAAACGGACGGTTGA
AAGCATTATTAAGAATGGAAAACACTGGAAACATGGACGATGGAATGATT
GAGTTTGGAAAAGGTCTGGATCGTGGAAGTGGTGATTGTCTTCAGCAAAG
ATCCGGTGAAGACTTCCAAAAAACGATTGAAAATATTCGCATATTGGAAG
AACAGATGAAAACTAACGGTTGTTGTAATGCAGTGTGTAAAGAAATGATT
GACGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:391932..394902 - |
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