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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:305842..308545+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11552.4.p1 ID=MSTRG.11552.4.p1|Name=MSTRG.11552.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2704bp|location=Sequence derived from alignment at sc0000084_pilon:305842..308545+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATGGTACATCTGAATTTTCATTAAGAATAAAAGTGACAAAGCCAGG
TGATGACAAAGAAATGCAAATGGTGCCAATTAACGAACCATTGGAATTCC
AATTAGATATTATAGATGCTCCAAATACGGTCAAAACTTCTCCACAAAAT
TGTTATGCAACCAAAGCTGATGGTTCTGGAAGATATAATTTGATTACGGA
CAGGTTAGGCATTTTAAAAAGGGTATTTCAAATGAGCAATCGTTCGGAAT
TATTCCAAAGAACTGATAGTATATATAATGTCTCATCCCCAAAACAAggc
aacaaaaacattttataccTTAAATCCTTCACCTTATAAACTAGatttac
ccagctggcacacaacgttgttttaacgttgatctaacgttaaatggacg
ttgtgaacgttagattaacgttgaaacaacgttgtgtgcccccggggggg
ggggtactagggttggtgaatgaggggtatgtgcggacgggacctccgaa
aaccgacccttagagagaccaaattttagtgaaaaagtgaccctcagaga
gactttttcgaaaaaatttctctgattttcaaatatttcctacccttagg
gagacttttttgtaattttttctctcaaaatcaaattttttttctaaaaa
tcgtgatttttcccacccttagagagactactttgaaatttcctgatttt
tgtaacccttagagagactttgaaatgtgaaaaacccgacccttaccgtc
cgcacataaccagcacctatttttgcctaagtaccccccccccccccggg
tgtgtGCCAGCTAGGTATAAACTAGATTTTTCATGGATTAAGTAAAATGT
TTTAATCACTAGAACAAAAATAGAACAcagattttcatgttttgattgaT
TCAGAAATCTCGAGTGAGTAATTTTTTCCCATGATGTGCCCTGTGCTGTG
AATTTCACAATTCCCTCcccaaagaataaaaaagaaatctctcTTGAAAA
CATAATATTATTACTGtttttttCTTCCTACGAGTCATCTTGTTCAAAGA
TTTGGCCACCCTAACCAgctaaccctttccgtgcccaaggggaaaaatga
caaaagaattgACGAAAACTTTCGAGGCGATGCAGTTGTTACGGCgggag
aaaatgaaaacatcgaTGGCATGTATATTTGTCATAACCAGTTGTTGGCC
ACGTGGCCCAATTTCAAATATACTGGACATGACTAACAAATTTTTGCCCA
GtttttttCGCAATGTCAAATATACTTGACATGGACCAATCAAAAAACTT
CCGCAATGTCAAATATATGCCATCGGCTGCTCAAAAAGTTTTTGCGATGT
CAAATGTACTGGATTTGGACACGGAAAGGACTAAGGTCGGTTCTCAGAGG
ACCGGGCTAGTACCCCCTTCCCCGATCAGCTCTCGGAACTCAGATCGACT
TTAcgttatatttttttcagatgtgAGGATGACGAGACAACTGCTATCAC
CTCCTCAAAAACTGCAATCCATCGGTTCTCATGGGAAATGTTAGCTTTCA
GATATTTTGGAAACTCTAATGCAGTCATCATCGTATGTGaagttttgatt
tgcaaaaatgaagattttgccGATTTAAGCGGAGAATGCAAAAGATGTGG
TCAgacttcaaaaagaaaaaaaagagctGTCAGTGATTCAATGGTTCTTG
AGAAAACAACAATCTCCAGTCAACCTATTTTTATCATCAACCTTCCAGAC
AAGCCAGGTCAGAATTTTTGGTTTAGGTCCTTGTCATACTGAATGATATG
TCTCCCAATTTGGAGTCCAAGCTCTGGAGCTTTCTAGTAAAAGAAATGTC
TTCGACTGTCAACCTGGCAACAGAATCTACTCCAGTTGCTTCCCGTAATG
ATGGTGTGATTCGGGGATTCTTTACGATTGATGAGCCCTTGATAAGTAAA
TATGAATAATGTAGATTTTCACTTATCGCAAATCTTACACGAATTTCATG
ACTGGCTGATATTTGCTAGATCCTCCTCTTGGCGGTATAAAGCGGGATGA
AACTTTAAAagcttttaatattttagaagAATCACCAGCACAAAAGGATG
AAGGATTTTTGAGAACACCAGTAGGAATTTCAGTGATTGCTGTTTTAGGA
GTAATCATTCTCGCCCTGAGCGCTTTCATTGTGAAGAAAAAGATGGTTGC
TACCTCCTCACATTTGATGAAGAAAACTTTACAAGTTGAaggaaatgttg
aaaaaggAGTTGACAACATGGCCATGGAAGTGATCAGAAACTGATCATGA
ATAATGGTTGAGGATTCATGTCTCATCGAAAAAGTCCTCTTATTAATTAA
GAAACGTATTAGCATTTAATCTACCGCACTtatatttagatttttaaaaG
CTTGGAAACTATGTCTTTTATATTTGATAGgattttatgaaaaatggtta
CCGTAAAAGACGCACTACTCAGTGGGGGCGTACCGTTTTTCGGAATTGCC
GAAATTGGGTAAAACTTCtttggtatttcggaattctaaAATTGTTTCAG
TATAGGAAATCCTTGaaattttgcttcgaaattaaagttatttttaaata
tCTAACTGCTTCAAATTTTCTCACCGTCAGTAGCCATTAAACATGTCATT
tcatacatcaaaagaagcATATGGAAATTTATGGAAATGGCTGTATCGTT
AAAT Coding sequence (CDS) from alignment at sc0000084_pilon:305842..308545+ >MSTRG.11552.4.p1 ID=MSTRG.11552.4.p1|Name=MSTRG.11552.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1917bp|location=Sequence derived from alignment at sc0000084_pilon:305842..308545+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGCCAATTAACGAACCATTGGAATTCCAATTAGATATTATAGATGC
TCCAAATACGGTCAAAACTTCTCCACAAAATTGTTATGCAACCAAAGCTG
ATGGTTCTGGAAGATATAATTTGATTACGGACAGatgtgAGGATGACGAG
ACAACTGCTATCACCTCCTCAAAAACTGCAATCCATCGGTTCTCATGGGA
AATGTTAGCTTTCAGATATTTTGGAAACTCTAATGCAGTCATCATCGTAT
GTGaagttttgatttgcaaaaatgaagattttgccGATTTAAGCGGAGAA
TGCAAAAGATGTGGTCAgacttcaaaaagaaaaaaaagagctGTCAGTGA
TTCAATGGTTCTTGAGAAAACAACAATCTCCAGTCAACCTATTTTTATCA
TCAACCTTCCAGACAAGCCAGaagAATCACCAGCACAAAAGGATGAAGGA
TTTTTGAGAACACCAGTAGGAATTTCAGTGATTGCTGTTTTAGGAGTAAT
CATTCTCGCCCTGAGCGCTTTCATTGTGAAGAAAAAGATGGTTGCTACCT
CCTCACATTTGATGAAGAAAACTTTACAAGTTGAaggaaatgttgaaaaa
ggAGTTGACAACATGGCCATGGAAGTGATCAGAAACTGAATGGTGCCAAT
TAACGAACCATTGGAATTCCAATTAGATATTATAGATGCTCCAAATACGG
TCAAAACTTCTCCACAAAATTGTTATGCAACCAAAGCTGATGGTTCTGGA
AGATATAATTTGATTACGGACAGatgtgAGGATGACGAGACAACTGCTAT
CACCTCCTCAAAAACTGCAATCCATCGGTTCTCATGGGAAATGTTAGCTT
TCAGATATTTTGGAAACTCTAATGCAGTCATCATCGTATGTGaagttttg
atttgcaaaaatgaagattttgccGATTTAAGCGGAGAATGCAAAAGATG
TGGTCAgacttcaaaaagaaaaaaaagagctGTCAGTGATTCAATGGTTC
TTGAGAAAACAACAATCTCCAGTCAACCTATTTTTATCATCAACCTTCCA
GACAAGCCAGaagAATCACCAGCACAAAAGGATGAAGGATTTTTGAGAAC
ACCAGTAGGAATTTCAGTGATTGCTGTTTTAGGAGTAATCATTCTCGCCC
TGAGCGCTTTCATTGTGAAGAAAAAGATGGTTGCTACCTCCTCACATTTG
ATGAAGAAAACTTTACAAGTTGAaggaaatgttgaaaaaggAGTTGACAA
CATGGCCATGGAAGTGATCAGAAACTGAATGGTGCCAATTAACGAACCAT
TGGAATTCCAATTAGATATTATAGATGCTCCAAATACGGTCAAAACTTCT
CCACAAAATTGTTATGCAACCAAAGCTGATGGTTCTGGAAGATATAATTT
GATTACGGACAGatgtgAGGATGACGAGACAACTGCTATCACCTCCTCAA
AAACTGCAATCCATCGGTTCTCATGGGAAATGTTAGCTTTCAGATATTTT
GGAAACTCTAATGCAGTCATCATCGTATGTGaagttttgatttgcaaaaa
tgaagattttgccGATTTAAGCGGAGAATGCAAAAGATGTGGTCAgactt
caaaaagaaaaaaaagagctGTCAGTGATTCAATGGTTCTTGAGAAAACA
ACAATCTCCAGTCAACCTATTTTTATCATCAACCTTCCAGACAAGCCAGa
agAATCACCAGCACAAAAGGATGAAGGATTTTTGAGAACACCAGTAGGAA
TTTCAGTGATTGCTGTTTTAGGAGTAATCATTCTCGCCCTGAGCGCTTTC
ATTGTGAAGAAAAAGATGGTTGCTACCTCCTCACATTTGATGAAGAAAAC
TTTACAAGTTGAaggaaatgttgaaaaaggAGTTGACAACATGGCCATGG
AAGTGATCAGAAACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:305842..308545 + |
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