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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:148991..152875- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11542.1.p1 ID=MSTRG.11542.1.p1|Name=MSTRG.11542.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3885bp|location=Sequence derived from alignment at sc0000084_pilon:148991..152875- (Clytia hemisphaerica_ch_hm2_pilon)
ATCGTCTTCGAGAGCATTCAATTAGACTTGAAAATTACCTATAGCGCTTC
TGATAAGATACAAAGATACGGTAAGACCGCGTGTACTAACGCACTTTGTA
ATACGCCTTGACGCACTTTGTAATAAAAACTGCCACATTTTTTGATACCT
GACACACTGTGTAATAAAAATTAACGCCTGACGCACTTTGTAAGTGTATT
ACAAAGTGTGTCAGGTATTACAAAATGTGGCGTTTTTACAAAGTGCGTTA
GTACACCGCGTACCTTATTATACTACAAAAGAACTTTTATGTATACGCAC
TTTTGAAGATGGCGGACTGACTGGAGTGATTTGGAAAAACCCCGCCTGCT
GCTCTGATCCGCAAAAGCAAGGACAGTTAAGTGCTGATTTATCGTCGTTA
TCAGTCAGGATCTAGGCAAATCAGAAGCTTACCGTCCCTGTTGCAGAAAA
AAAAACAGATATATGAATTTCCTAATACTTCCATGGCCGTCACAGTTTTG
TTATTTATTCTGTAGTATATAAATAAAGATTTCGCCTTTGGTTCTCATTT
ATGGCTTTTCTGTGATGATAAAAAATTCGCCTTAGGAGCACCGAGCTCAC
TATATTAATGCGAAGTGAAAGTACTCAGCCAACCCATGCTATCTGGGCTC
GAAACAGGATTTCTCCACGATGAACGCAGTTTCAAATCTGTATTCCGATA
TTAGATAGAAATAGATCTTAAATATTCTTATAGTAAACAGCTCGACGAGC
ATTAATCGAGCACATTTGGCATAGGGACGAATTAGAATTGTGTATTTGTA
TCGTAGATAGAAAAGTCCTGTGGATAAGTGCTTTTTAGATAATCCTAATT
CCACTTTAAGGTCTTGGTTGCTCGAAAAAGATCAGAATCCACTCCTATGG
AGAGACAAAGGAAGATTTTAAAGGTGAAGTTACTTTGTCCTTGGGAAACG
TCCTTTACAAGATCCAAATCAAGAAATACAAAGGAAAAAAGTAAGGAAAA
TGTCGCTTTAAAAGATATCAATCCTTGGGTCTAGTGGCTACTAGGCTGTT
GGCATTCACTAACGATTCCTCGGATTCGTGCTCCTTGATAAATACTACTA
GCTGTTTTTTGCATCTTTAGCCTTAAACGAGGGGTCAAGCTGGAGTTCTT
TGATGACTCTGTTGGTCGTTAAATGTTGAGACAAACGATTTTATTACTTT
TTCTAAAGAACGCGTCATCCCTATTGTTTAAAAATAACCAATCAGTTAAG
CATCTTGTAAAAACTCCAAGGCATCTCTAATTGAAGGGATAGTGTCCTTT
GTTCTCTGAAAGCTGTAGTGGACTGAAATGCAGCAACACAACTCAAATAC
TACTGGTGTTTGGCTATTTTAGCCTTTACTAAATACTGTGATAACAACAA
TTTTTCTCCCATGGTAAAAAATGAAATGAAAGAAGAATCGTAATTTTCCA
TTTCACCATGGATATTCTAAACTTTGAGAAAAATCATCGTAAACTATTCT
GTCAAGCATCGATTCATTACCAAGCTACAATCACAATCGTTATCACCTTG
TATCCAGTAAGACGTTGTATACTCGAAAAAATTATCACCAACCAATACTT
CATGGTAGTTTGTCTTATATTGTTTTGGTAACAAAGTCATCCCTTTACTG
TAGCAGTATTTCTGTGCAGTTTGCAAGTCGACTTGTGAAAGTTGAAAGGG
ATATACACGACCTTCTTTATAAATTCAAACTGAAAATTGCAATAAAATGC
AATAAAATGTAAACTTTTTTCAAAAAATGGTCAAGAGCTTGAGGGCCATT
CCGAGAAAATTGAAAAATATAGTTAACAGTGCAATTGTTTCAAATCCAGG
AACATATGAAATCTGACGTTTTCTTTTTAAATCTTTTGCATTCAAAAACT
GGACCATGCAAGAGTATTTTCTGGCGCTATCAGTAACCATCAAAAAGCCA
ATAATACGTAGGGAACCCAGGTTGAGCGAATGGGAATTACAGAGCAAAAT
TCGCTACATGCAAAACAAAAAAGTCTTACAGTTATCAAGGGCAAGCGAAA
AACTAGGATTATCATTTTGATAAAAATGCTCCGGGATCAACCCATCAAAC
CAAAGAGCAGCCTAAAAAATAAAAAGGGCAATGACATGGCTGTTACTGAA
ACGAGGAAACGGCTAGTATTCAGAGGATTCTTTTAAAGTGAAATTGACAC
TTTATTGTCTTCTTTTGCCATCAATGATTATTAAAGTATTAAATATATTA
AAGTTCCTTGTTCAACTCAAAGTCAAAAGCCCCAGTAACCTTTTGTGTTC
CTGGAAGAAACTGAATAACTTTTCTCTTCATATTCAAGGTATTTTGAGAT
TCCTGTTTGTGGCGACCAAGTTCAAGAGAATCTGAAATCTTTGGAAAGGA
TAACATATGCACCTTCGGATCTAGATGTTTTTAAAAAGGTGAGTTTGAAA
TTTTCTGTCAGTCTTACTCTAGAGATATCAAGATAATGCGTTTGCATTAT
CAAAAATGTTTACATGAAGTTTTTACCGTTTTGACACGAACCGCAAAAAA
AGAAATACTGATACTGGTATAAATAATCTTATTTCGTTATTAAAACTGAT
TTTTGCTGTACAATCTCAGAGACGTTCAGAGACTTGCGATAATATAACTG
ATGAGACTAAAAATTTTATTTAACACCCAGATGCAGAATTTTCACCAAAC
ACTCTAAAGTTCTATGAGTCAGTTTGGATGACAGAATTTTGCTTGCCCGC
GTTAAGGATTTTGCAGCGGGAGGCCTAGACCCCAGCTCTGGTTTTCGGGG
GATTAATGGGTCCAACCGAAATATTTTCAACCTTACGCGCAAGGGTAGTT
TAACCCGACTTTGGATGCGGCATATCCAAGGCCGGCTACTCTTAGGTGCC
AAATAAAACGCCCCCCCCCCCCCCCCGCCCCCGCTTGTTAATTTTTGGAA
AATTTTCCAACCCCCCGGACTTTATTATGACCCCCCCCCCCCGTTTATTA
ATTCTTAAAAATACTTTCAGCTGTCAAAGAGAAGGCCCCTTAGTTTGCTC
TAAATAGCCTGATTTTAGCCTATATTTACCTTATTTTGTGTTTTCAGAAG
TACAATTTCCCCCCCCCCCCCCCCCCCCCCCCCGTTTATTAAAATCTCGA
AAATTTTCGAACCCCCCAGTTTATTCGAACCCCCCCCCTTCCCCGTTTAT
TTGGCACCTAAGAGTATCCGCCATCGGAATGTTGTCTAAATATTGTACCT
AACCGTTATAACCGTTTATCGCTTCCATTTTTCATTGAAGAGGGGTTTTG
AAAACAGTGTTTTTAATTTTGTTTTGATTCATCTTTCTACTTGTTTGACA
CCCTTTCTTCCTTGCTTTTCTCGTCATTATGTATGATCATTTCCATGTAA
TTTGGCCCAGCGCGCAGCGGAATGGGCCTTTAAAACACAACTGGTCGAAA
AGATTTGACTTTGTCGGGGCCTATGCGCGCAAGTATCAATTAACGAAGTC
CAGGCTAAAAGTTGATGATCTTAATATTACGCGCATAAACCATATATAAT
TAATACCTCCGAGTGATATGGTCAAATCATTTGAAGCAATATAAAATACT
TATAAAAATTAAAGTAATTAATCCTTTATTGCTCGCCCGACTCGAGTTGT
TCCATATATAGAAAAAATTCCCTCCTGTAAATTAAGTTGTATAGCGACTC
TGCAATGAAAAAATATGTTGACACTGCTAATACTGCTGGGCCTTTACGCC
GCTGAGGCTTTCTTGTTTTCGTATAATATGCATTTAGTTTTTCACTTTAT
ACAGGCAGCTGTTTGGTCTGATGGTTTAATACCGGAACACTTTCATCAAC
AATCAAACGATGGAATTTATTGGTTTGTTCGAACA Coding sequence (CDS) from alignment at sc0000084_pilon:148991..152875- >MSTRG.11542.1.p1 ID=MSTRG.11542.1.p1|Name=MSTRG.11542.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1524bp|location=Sequence derived from alignment at sc0000084_pilon:148991..152875- (Clytia hemisphaerica_ch_hm2_pilon)
GCAGCTGTTTGGTCTGATGGTTTAATACCGGAACACTTTCATCAACAATC
AAACGATGGAATTTATTGGTTTGTTCGAACAGTATTTTGAGATTCCTGTT
TGTGGCGACCAAGTTCAAGAGAATCTGAAATCTTTGGAAAGGATAACATA
TGCACCTTCGGATCTAGATGTTTTTAAAAAGGTCTTGGTTGCTCGAAAAA
GATCAGAATCCACTCCTATGGAGAGACAAAGGAAGATTTTAAAGGTGAAG
TTACTTTGTCCTTGGGAAACGTCCTTTACAAGATCCAAATCAAGAAATAC
AAAGGAAAAAAATCGTCTTCGAGAGCATTCAATTAGACTTGAAAATTACC
TATAGCGCTTCTGATAAGATACAAAGATACGGCAGCTGTTTGGTCTGATG
GTTTAATACCGGAACACTTTCATCAACAATCAAACGATGGAATTTATTGG
TTTGTTCGAACAGTATTTTGAGATTCCTGTTTGTGGCGACCAAGTTCAAG
AGAATCTGAAATCTTTGGAAAGGATAACATATGCACCTTCGGATCTAGAT
GTTTTTAAAAAGGTCTTGGTTGCTCGAAAAAGATCAGAATCCACTCCTAT
GGAGAGACAAAGGAAGATTTTAAAGGTGAAGTTACTTTGTCCTTGGGAAA
CGTCCTTTACAAGATCCAAATCAAGAAATACAAAGGAAAAAAATCGTCTT
CGAGAGCATTCAATTAGACTTGAAAATTACCTATAGCGCTTCTGATAAGA
TACAAAGATACGGCAGCTGTTTGGTCTGATGGTTTAATACCGGAACACTT
TCATCAACAATCAAACGATGGAATTTATTGGTTTGTTCGAACAGTATTTT
GAGATTCCTGTTTGTGGCGACCAAGTTCAAGAGAATCTGAAATCTTTGGA
AAGGATAACATATGCACCTTCGGATCTAGATGTTTTTAAAAAGGTCTTGG
TTGCTCGAAAAAGATCAGAATCCACTCCTATGGAGAGACAAAGGAAGATT
TTAAAGGTGAAGTTACTTTGTCCTTGGGAAACGTCCTTTACAAGATCCAA
ATCAAGAAATACAAAGGAAAAAAATCGTCTTCGAGAGCATTCAATTAGAC
TTGAAAATTACCTATAGCGCTTCTGATAAGATACAAAGATACGGCAGCTG
TTTGGTCTGATGGTTTAATACCGGAACACTTTCATCAACAATCAAACGAT
GGAATTTATTGGTTTGTTCGAACAGTATTTTGAGATTCCTGTTTGTGGCG
ACCAAGTTCAAGAGAATCTGAAATCTTTGGAAAGGATAACATATGCACCT
TCGGATCTAGATGTTTTTAAAAAGGTCTTGGTTGCTCGAAAAAGATCAGA
ATCCACTCCTATGGAGAGACAAAGGAAGATTTTAAAGGTGAAGTTACTTT
GTCCTTGGGAAACGTCCTTTACAAGATCCAAATCAAGAAATACAAAGGAA
AAAAATCGTCTTCGAGAGCATTCAATTAGACTTGAAAATTACCTATAGCG
CTTCTGATAAGATACAAAGATACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:148991..152875 - |
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