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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:76121..81376+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11535.1.p1 ID=MSTRG.11535.1.p1|Name=MSTRG.11535.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5256bp|location=Sequence derived from alignment at sc0000084_pilon:76121..81376+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACTCTTACCAGTTACCAGGCAGAATGGACGAGGGTGAAGACATACAAG
AATATCATAGCGAGACATTGGAAAGCAAATTTTTTGCTCCCTTTGCAAAT
ATACCTTACGTTTCTAATGTACATTACGCTCGGCCTTCCGATGTTTTTAT
ACCGAAaggttattttcaaaacattgaagAGATTAAAAACTTCGAATTTT
TTGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGTAGCGTTCGt
attgaacatttttgtttgtttggatatgtgtatattttgcattgatattt
ccatttttttatacATTCTAGACGTGTGTTTCACCCCTTGACAATATAAT
CTTCTACCCCTTCTTTACAGTGTTTTTGTTCGTGAACCGAAGAGTCATTT
TTCGCTAATTTCGATCATTTCCGcgaaaaatagaaatccgatttttggcg
aaaatctcaagggaaaatgaaagaaatcgaaaaaaaaaagatactgATTG
AGCGATTTAAACTTTGAAGTCTTATTTTGAGAACATTTATCCGCTTAAGG
TACTCTGAAGCTGTCGAGATGGGAAATTCTGTAATTTCACAGGTTCTCGT
ACTGAAGTTCACACTGCTGTCGAGCTGTgtgcaatttggcggaatttatt
ttggcgatttaaaaaaaattctaaatttggcgagacataattttggcgaa
cgacctattttttgttgaatattaagcttaaaaaggatgaaaaaaGGGTT
TCTagtaaaagaaatttaaatttggtgggaattaattttggcgaatggcc
cATATATCTAAATTTAGCGGGAAGAAATTtcggcgaatttggcgaatttt
tgtggcaattcgccaaattcgccaaaatttcttctcttaaggtaagtTCA
GGTTCTCGTTGAAAGAAAGACTTGAACTGGAGACTCTCTAAAGAAACGTT
AATGTAATGATGTTTTATCGATAATTTTTAGGTACGAATTGGTGCGAGAG
GATTGTTTGGGCACTCCGTAATGATATAAAATTGAATATTCAACATGCAC
CCCCTGTATCAGTTTTCGAGTAAGTGaattttagagtccgcaaagcctta
aaatgttcttaactggttcttaagattttggccatcgaagccttatgttc
ttatacactTATTTGTTTtcgatggtttgagacagattcgaATGTAGCCC
AATCGGCGACGTATCGCTACGTCTTGTCTCTCCGGTGGagaaaataccct
acaatttccgCCCTACtggaaagttgaattttttattttttttgtttttt
tttatagtaGGTTTTAAACGGAACAAATAtataaataccttatcggggaa
aaaatgtcagagttttatttagtcggggtttttactcgttttttttttcg
tcggggggaaatttcgtcacctagaggcattttcgtcactttatCACGAC
CAAATTTCAAATTCCTCTCTTTTCCCGAATTCCCAAATTTTTGGgcggaa
aatcttttttttaaaagacttgACTGACAACCGACATTGTGTtactattg
ttattttttatcaaacctttctagttttaagggctctgaccatggtcgga
aaattgattttagtatttgaacataaaagttatgttttaggttctttaac
acttttaacaaagaattgcctttataaattgctttttaatcaaatctctt
aagagtaattaagaatttaattacaaaaatgacgttatgaactttaaaaa
gacgttaataatatgttgcatcaccttcttttataaaaagtgccaagttt
taatgggtaattaacctttttgtttcgaatttttttcaaactgtccgcaa
agaattgaactgttttaaatttttcggaaaaacttTCTAAATTAACGCAT
CAAAAGtgatggctgtttttctatgaaaaattgggatgaaaaattcgtca
aaaagcactattttcaagattttgaagcaaataaacttttagaaaaattt
tccgaaaaaataaattttagtttgataaaagatacaccatctaccgcagc
aaaattcttttcaaaatgttttttctccacagaaactaagctcttcaaag
tttgcaaaagtcttcattttcttcttcaacaaattttttcattgtgattc
ttaaattttcagactcaatgATAATTGGTCTAACAGAagatgtataacat
gccacagttttgtgggctacatcaagtagaactttacattttgtaagtgg
caaatataaaaccgggtaaaagttttgggcgggggaaaaaatcaggtaaa
agttttggttggggataaaaaaaatcgggtaaaactTTTGGTCGGGTgtt
aaaatatcaaagaaaaaattcgtcgggggaaaatttcgtcaccccttcaa
aattttcgtcactttccccagACATTTCtcccccgataaggtacgcAAAG
TTCCTAGCCTCCCGCTAAAAACCCTAGATTATACcaccaggaggaaggaa
ccaaaaactgagaacaatagaattcccaaTCCCTTTTtgtatttcaatag
aaatttccATCGCCAGACCGGGGCTGTGAGCACGGGTGTTTTAAAGTGAA
AAGAACAAAATGTTTGAAACAGGTGCTGCAAAAAccaaatacatgttttt
tcttttataagcataacgtttataagcatacgcagGCTCAGTTTTCGGCA
CCTAAACAATGGTTCTATtgttttagaacaatagaatgctaagcataatg
cgagcctgatataggggcagacacttgcttataaaaaaaaacatgtacac
aaATGGTAACGAAAGGATATGTTCTACATAGTTGCCATTGTTGCCACTCT
CTCATTCGATGTTCAAGGGgtcaagaattttcttcaaatcagagaaatat
ttgaattagagagtacTTTCCACCAGAAGGAACCAATGGTTTAGTTCCGA
TTACAGAtaaattcgaattaaagaggttcgaattagaaaaaTATGACAAT
AGGAAAATATTAGATAGAGAGTTGCCCTGGTTCGGTAAAATTTTGTAATC
TAAACTTTCCAGATGTTTAAAAGTTTCCCATACATCAATCACTGTCATAT
CAAAGGATTATCATCTTTCAATATCACAGCATTGTTATGGGTATAGGAGA
TTTCGATAGTGACAACAACAAAGCTAACGATGAGATTTTTTCGTCCATGA
AACGACCACGTGTTATCAAAATGCATCTTTCATATGAATTATTACCAAGA
CAGTTTCAACAAAAGCAACCTAAGGTATTTATACTCTTTCTCACCTACAA
ACATCAATAGAATCTGATAGAGCGATTTGTAAATAAGGCTAAAATAAGAT
gatgttggaaattttcatACTTGACAAAATATAGCAAACAAAATAGATCA
ACAGACGATAATTGgcttcacatgaaaactcagattacCCCGGAGAATTT
CTCAACGATGCTTTGTGTGGaaaaaaattcaccgtgaacttttttccgcg
caaagcattgtgagTAATtttcgggggtcaaatctgagttacTTTCAcct
taagccgatatcgtctacaTTACATACTAGGCCAGTCAATCCCAAGGTGC
ATCACGTTTCGTAGTACTCTACGGAAATCAAGAATTTCCGTAGAGAACGG
GacttaccgtgaaaagcacaggccgatatcatatattgacctgtgcTGAC
CAATCGAGATTCAGCACGCAATcaaaatgaatctatgttttcattttcat
ttctgtcatttgttttccttttttctgctgAGCCAGCTTTTCCCATAAAT
TATGCTCGCGcatcgaaaatatcaaaatgcgcgcgaaagtactgctaagt
aatacgccgaaaacTGGtaaatcaggccgaacctgcattgcagggaaaaa
ctTCCCTGCAGgtgagttacctgcgccaagcgttaaacaagcagcaaaaa
tatcataaactaaactgtgaacaaagtttaacgcttggattcccagggta
acttaacctctgataatCAGGTAAAAAGGGACTGTTTACATACAAGTCTA
CAGAAAGCCAAATATTTGACGCAAATCATCggcaaacatttttttatatc
acAATAGATGATTTACATGCTTCGAAACCCAAGAGATGTTTGCCAGTCCC
TTCACGGTCACTTCTATACACTCTACGATGACTTTTCTGGATCTTTACAA
GATGTTGTTAATCTCATGACCGATGATGCTGGATGTTATTCTGGTCCGTT
TTTTAGACACGTTTTGGGATACTGGAAGCGACGCTCTTATGAAAATATAC
TCATCATCTTTTacgaagaaatgaaaaaagatttatcagGTCATATCAAG
AAGATTGCTGATTTCTTAGACATTAAAATTTCAGATGAGGAAGTATCAAA
TCTGGCCAAACATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAA
TGATTCCCTTCCATGCAAAGCAGGTCAGTGTGGaacgattttttcaaaat
ctttgctcAAATTTCAGATGGAAAAACAATTTAGCACAATCAAATCCTAC
TTACAATCATAAGCCATATAATAAGGCGAAGTAGTGGAGTTGATATCCAC
TCTCTTTTTCATGCCGAAGGTCAGTTTTCGATTCCCATTCGGTGCAATAA
ATGGTTTGACCAGTGAATCCTATTTATACCGACATTTTTCCAGTTTCATA
ATACCAGGGGGTATTTTACAGCACCatgaataacttttgatctagttgaa
ATTTTTACACTAAATTTGGAACAGATGTTGCTTATCATGGaaagatttaa
aagattttgttaagTCAGAAAGTTTTGTGTGCTTTGAAAAATGTGAAGTA
GTGCATGGGTGGTGTAAAATACACCTTGGTAGAAATAGGGTTTTATCCAG
GTTAATACGTCATGTGTCAATGTGAGGAGAAATAGGTATTACAACTCGGA
TACCGAAGAAGGGAGGAGACCTTTGTGGTATTGCATCGATATTTGTCAGG
TTCACCTTTGTACTATaacactttgtaataaaaataaacgcattttgttt
caaattgaACAACTTTTCAGGAAGGTCATAGTTCAACAGTCGAAGCAGCT
CACAAGGGAAAGACAATGTTTAACAAGGGACAAGCTGGATCGTGGAAGGC
TTTGTTTACACCAGAGATGACAAAACAAATGGAAGAATGGGAATCAAAAT
GGTTGAGAGATACTGATCTTGAACTTATTTATGAATAGTATTGGAGTATC
GAAACT Coding sequence (CDS) from alignment at sc0000084_pilon:76121..81376+ >MSTRG.11535.1.p1 ID=MSTRG.11535.1.p1|Name=MSTRG.11535.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5025bp|location=Sequence derived from alignment at sc0000084_pilon:76121..81376+ (Clytia hemisphaerica_ch_hm2_pilon)
AACTCTTACCAGTTACCAGGCAGAATGGACGAGGGTGAAGACATACAAGA
ATATCATAGCGAGACATTGGAAAGCAAATTTTTTGCTCCCTTTGCAAATA
TACCTTACGTTTCTAATGTACATTACGCTCGGCCTTCCGATGTTTTTATA
CCGAAaggttattttcaaaacattgaagAGATTAAAAACTTCGAATTTTT
TGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGTACGAATTGGT
GCGAGAGGATTGTTTGGGCACTCCGTAATGATATAAAATTGAATATTCAA
CATGCACCCCCTGTATCAGTTTTCGACATTGTTATGGGTATAGGAGATTT
CGATAGTGACAACAACAAAGCTAACGATGAGATTTTTTCGTCCATGAAAC
GACCACGTGTTATCAAAATGCATCTTTCATATGAATTATTACCAAGACAG
TTTCAACAAAAGCAACCTAAGATGATTTACATGCTTCGAAACCCAAGAGA
TGTTTGCCAGTCCCTTCACGGTCACTTCTATACACTCTACGATGACTTTT
CTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATGATGCTGGATGT
TATTCTGGTCCGTTTTTTAGACACGTTTTGGGATACTGGAAGCGACGCTC
TTATGAAAATATACTCATCATCTTTTacgaagaaatgaaaaaagatttat
cagGTCATATCAAGAAGATTGCTGATTTCTTAGACATTAAAATTTCAGAT
GAGGAAGTATCAAATCTGGCCAAACATTTTTCCTTTGATTCGATGAAACG
AAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGAAGGTCATAGTT
CAACAGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAACAAGGGACAA
GCTGGATCGTGGAAGGCTTTGTTTACACCAGAGATGACAAAACAAATGGA
AGAATGGGAATCAAAATGGTTGAGAGATACTGATCTTGAACTTATTTATG
AATAGAACTCTTACCAGTTACCAGGCAGAATGGACGAGGGTGAAGACATA
CAAGAATATCATAGCGAGACATTGGAAAGCAAATTTTTTGCTCCCTTTGC
AAATATACCTTACGTTTCTAATGTACATTACGCTCGGCCTTCCGATGTTT
TTATACCGAAaggttattttcaaaacattgaagAGATTAAAAACTTCGAA
TTTTTTGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGTACGAA
TTGGTGCGAGAGGATTGTTTGGGCACTCCGTAATGATATAAAATTGAATA
TTCAACATGCACCCCCTGTATCAGTTTTCGACATTGTTATGGGTATAGGA
GATTTCGATAGTGACAACAACAAAGCTAACGATGAGATTTTTTCGTCCAT
GAAACGACCACGTGTTATCAAAATGCATCTTTCATATGAATTATTACCAA
GACAGTTTCAACAAAAGCAACCTAAGATGATTTACATGCTTCGAAACCCA
AGAGATGTTTGCCAGTCCCTTCACGGTCACTTCTATACACTCTACGATGA
CTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATGATGCTG
GATGTTATTCTGGTCCGTTTTTTAGACACGTTTTGGGATACTGGAAGCGA
CGCTCTTATGAAAATATACTCATCATCTTTTacgaagaaatgaaaaaaga
tttatcagGTCATATCAAGAAGATTGCTGATTTCTTAGACATTAAAATTT
CAGATGAGGAAGTATCAAATCTGGCCAAACATTTTTCCTTTGATTCGATG
AAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGAAGGTCA
TAGTTCAACAGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAACAAGG
GACAAGCTGGATCGTGGAAGGCTTTGTTTACACCAGAGATGACAAAACAA
ATGGAAGAATGGGAATCAAAATGGTTGAGAGATACTGATCTTGAACTTAT
TTATGAATAGAACTCTTACCAGTTACCAGGCAGAATGGACGAGGGTGAAG
ACATACAAGAATATCATAGCGAGACATTGGAAAGCAAATTTTTTGCTCCC
TTTGCAAATATACCTTACGTTTCTAATGTACATTACGCTCGGCCTTCCGA
TGTTTTTATACCGAAaggttattttcaaaacattgaagAGATTAAAAACT
TCGAATTTTTTGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGT
ACGAATTGGTGCGAGAGGATTGTTTGGGCACTCCGTAATGATATAAAATT
GAATATTCAACATGCACCCCCTGTATCAGTTTTCGACATTGTTATGGGTA
TAGGAGATTTCGATAGTGACAACAACAAAGCTAACGATGAGATTTTTTCG
TCCATGAAACGACCACGTGTTATCAAAATGCATCTTTCATATGAATTATT
ACCAAGACAGTTTCAACAAAAGCAACCTAAGATGATTTACATGCTTCGAA
ACCCAAGAGATGTTTGCCAGTCCCTTCACGGTCACTTCTATACACTCTAC
GATGACTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATGA
TGCTGGATGTTATTCTGGTCCGTTTTTTAGACACGTTTTGGGATACTGGA
AGCGACGCTCTTATGAAAATATACTCATCATCTTTTacgaagaaatgaaa
aaagatttatcagGTCATATCAAGAAGATTGCTGATTTCTTAGACATTAA
AATTTCAGATGAGGAAGTATCAAATCTGGCCAAACATTTTTCCTTTGATT
CGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGAA
GGTCATAGTTCAACAGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAA
CAAGGGACAAGCTGGATCGTGGAAGGCTTTGTTTACACCAGAGATGACAA
AACAAATGGAAGAATGGGAATCAAAATGGTTGAGAGATACTGATCTTGAA
CTTATTTATGAATAGAACTCTTACCAGTTACCAGGCAGAATGGACGAGGG
TGAAGACATACAAGAATATCATAGCGAGACATTGGAAAGCAAATTTTTTG
CTCCCTTTGCAAATATACCTTACGTTTCTAATGTACATTACGCTCGGCCT
TCCGATGTTTTTATACCGAAaggttattttcaaaacattgaagAGATTAA
AAACTTCGAATTTTTTGAAGATGATACAGTTATATGTGGATTTCTTAAAA
CAGGTACGAATTGGTGCGAGAGGATTGTTTGGGCACTCCGTAATGATATA
AAATTGAATATTCAACATGCACCCCCTGTATCAGTTTTCGACATTGTTAT
GGGTATAGGAGATTTCGATAGTGACAACAACAAAGCTAACGATGAGATTT
TTTCGTCCATGAAACGACCACGTGTTATCAAAATGCATCTTTCATATGAA
TTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGATGATTTACATGCT
TCGAAACCCAAGAGATGTTTGCCAGTCCCTTCACGGTCACTTCTATACAC
TCTACGATGACTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACC
GATGATGCTGGATGTTATTCTGGTCCGTTTTTTAGACACGTTTTGGGATA
CTGGAAGCGACGCTCTTATGAAAATATACTCATCATCTTTTacgaagaaa
tgaaaaaagatttatcagGTCATATCAAGAAGATTGCTGATTTCTTAGAC
ATTAAAATTTCAGATGAGGAAGTATCAAATCTGGCCAAACATTTTTCCTT
TGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGC
AGGAAGGTCATAGTTCAACAGTCGAAGCAGCTCACAAGGGAAAGACAATG
TTTAACAAGGGACAAGCTGGATCGTGGAAGGCTTTGTTTACACCAGAGAT
GACAAAACAAATGGAAGAATGGGAATCAAAATGGTTGAGAGATACTGATC
TTGAACTTATTTATGAATAGAACTCTTACCAGTTACCAGGCAGAATGGAC
GAGGGTGAAGACATACAAGAATATCATAGCGAGACATTGGAAAGCAAATT
TTTTGCTCCCTTTGCAAATATACCTTACGTTTCTAATGTACATTACGCTC
GGCCTTCCGATGTTTTTATACCGAAaggttattttcaaaacattgaagAG
ATTAAAAACTTCGAATTTTTTGAAGATGATACAGTTATATGTGGATTTCT
TAAAACAGGTACGAATTGGTGCGAGAGGATTGTTTGGGCACTCCGTAATG
ATATAAAATTGAATATTCAACATGCACCCCCTGTATCAGTTTTCGACATT
GTTATGGGTATAGGAGATTTCGATAGTGACAACAACAAAGCTAACGATGA
GATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGCATCTTTCAT
ATGAATTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGATGATTTAC
ATGCTTCGAAACCCAAGAGATGTTTGCCAGTCCCTTCACGGTCACTTCTA
TACACTCTACGATGACTTTTCTGGATCTTTACAAGATGTTGTTAATCTCA
TGACCGATGATGCTGGATGTTATTCTGGTCCGTTTTTTAGACACGTTTTG
GGATACTGGAAGCGACGCTCTTATGAAAATATACTCATCATCTTTTacga
agaaatgaaaaaagatttatcagGTCATATCAAGAAGATTGCTGATTTCT
TAGACATTAAAATTTCAGATGAGGAAGTATCAAATCTGGCCAAACATTTT
TCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGC
AAAGCAGGAAGGTCATAGTTCAACAGTCGAAGCAGCTCACAAGGGAAAGA
CAATGTTTAACAAGGGACAAGCTGGATCGTGGAAGGCTTTGTTTACACCA
GAGATGACAAAACAAATGGAAGAATGGGAATCAAAATGGTTGAGAGATAC
TGATCTTGAACTTATTTATGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:76121..81376 + |
|
