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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:7558..15170+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11528.1.p1 ID=MSTRG.11528.1.p1|Name=MSTRG.11528.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7613bp|location=Sequence derived from alignment at sc0000084_pilon:7558..15170+ (Clytia hemisphaerica_ch_hm2_pilon) TTGTATCTGTTCCTTTGTAGATTAGATTTCAGTATCATTTATAGAAACCC
Actttacctttacattgcttttttgcttaatactttaatctttttttatt
tatgtttttagtGAATCAAATGTCAGTTGTAACCCACAGAGTAAAGACTT
GTTTCTTGAAAGAGTTAAAACATTCACGGTATGGTAAAATTTTTCATTGT
AACCTTTTTAAATCTCTAGTTAAACTATTATTGAAAACAGTTTTGTCTAT
TTCAAATCAGTTTTATATTAAATATTGTTGAATTCCCTAAAACTTATTCA
CAAGAGCTGAGGTAATCCATTCTAATTCTGGCAGGAATTAAATTTGGGGG
GATTAGCAAAAAGGCAAAActccccaaaattttaaaattgtttttgttgt
aCTAGTAGTGAAAGTATTGGCCAAAAGTAGCCACCCTTTAGCCAACCAAC
GAATTAAGTTTCATtatatttgattaaaaaatgatagtaaaaaaaaaaaa
ctgtaaaaTAAAGTATATCATAATCGCTTTTCTCATAGACAACTAACTGG
GCAGCAAAACCAAATGAGTTATCACCCTTGAAATGTGCTCAATATGGTTG
GTGCAATGAAGAACTTGACCAGTTGAGATGTGTCACATGCAGTGCTACCA
TATTTGCTGGTATGCCTGATGATTGGGATTCCTCAGCTTGTAAGCTTATA
CtaaatgttttagatttttatagatttttggtaaaatcaaaCCTGAACCA
AGACAAGACAAGAGATCTAGATCCTCCAGTACTATGATTCTAAGACTTGA
TTTATTAtaatgttaaaaattcaaagtttaaaCTTCCAATACTTTCAGTG
TTCTGTATTTATTGGCTTTTGGGATTGTCAAGGACGCCTTCGGAATATTT
TTGGCATGAAAGAGCTGTGCCttttaattatttatgtatttgattatcaa
attttaattcataagtattttcttttttagattctGACATTTGTAATGAG
ATCAAAGACAAATTGAAAATTGGACATCAAAAGCTCTGTCCTTGGCCACA
GAACCCCTGCCCACCATCCTTTTTGAGTTTACCCTCACGCTCAGCACAAC
AATGGAAAATGGAGATTCGGTCAGCATTTTGTGGGTTGCTGGAGTTGAAA
GGAAATCTACCTGAGTTGAATGAAGATACTGTAGCATCAATGGTAAAATT
CTTAAATATTTTAGGTTACACTGTTATtttatataagcataacgtttaaa
TAAGCACTCAAATtcggtaaaaaataagcataatgctaaaGCGTACcctc
caagctgaaatgcaaatAGAATTCTTGCTGCTTTTCTAAGACGCTGACTT
TTTTAGGGTTACTTTTGAAGCTGTTTGAGCTTTTTAAGACCAAAGATTTT
CACCTGCTGCTCCAAATTACAAAGATAACTTTCATTCTTTGAGCTGAATC
AATGTGCGacttaaaagttcaaaattttcatgaacccaaagaaaattcac
gatttgaagtctaagcatataaataagcataaattcaggctgaaaatgag
attttgctaagcatattggGCCTCGACCGAATTTTCCAGTATGCTTaaaa
aaaaGAGTATTACCATCATAGGTCCaatagtggggtcgtttagcataatt
tacaggaaaacaataagataattcacgcagaagatgctatttatggtcaa
ttttgaccaaagtgtggcgaaaagtggaacttgcgaatgaaatatctcga
gttaggtaaggaaatcagctataaccgtttcaaagtcttctatatagttt
ttcgagagctttcgaattatatacatgatattgtctgagaataagtttga
aattttcaaaaaaatttcgcccttaggatttgccttgggaaaatagaaat
gtcccaaaaaagggatgttccaccagtgggattttaggggaatttttcct
gaggtataagcatcctatagagaaggtctggagaaagtttcagctagatc
ttatttttttcctacaaacaacctgtatttttgtaacacgaccacactac
aaTGGTAAAGTCTTTCACCAGCTTtgcaaaaaaatagttttggcTCTTAT
AATCAACCTCTTCTAAGaggttttcattttaaaaaatcacctgTTTTGCA
ATGATCCCGCTGTGAGAGATAGAAAGAATCCAATTGGGCAACGATGGGAG
AGTATCATAGGGTCGATGAAtccatagaccttttcataaattacgtcaca
aacatcacttgacTCGTATTCAAACGATTACCATGGCGGTTATGTCTCTt
aagacattaaatgattttttacgaatagaaagtagttttgataaaatccg
aTGAGAGTTGATCACCAtggaaataaattcaaaacgaggcaattGTTGTT
TGTGACGTAGTTTATGCAAAGGTCTATTGACATTCTAATTTGAGGGGAAC
TAGCTGTGGTCAATTGACCTGAAATTGGAATTCAAGCCTGGTCACACTCC
ATTAATAACAACAATAGAATATGCTATTGTTACTGGAGCATAATCAGGCT
TTAACTCCaattatttgtttatttgaaaattgggTTTAATGTTTAGGAAA
TATTACATTCCtttttttCTCTTAGAAAAGTCTGGATAACAGTTGCATCG
AGAAGCTTTTGACAAACGTTTTTCGCCATTCTTGTGATACAGATGATGAA
GTGTTACAGGCTAAAGTTGCATGCATATTGGCTGTCACAGGCTGGAATGC
AAGGTGAGAATTTCTAAATCTAATTTTACATCATGGGCTGTTCCATTGAA
TTTCCATACAGGGAgctttttaagtcagaaaaagatttttagaaatgtgc
TTGGTGCCCcctgaaaaatttgcaaaagagcccttggaaaaattctttcc
aTACCTTAAATAAAGTCAGTGTTTTGCTCACTGGAAAtataataactttt
taccccctggaaaatgaaaaaatactcctttagaccccctggaaattctt
cacggaaatgttcgtccaccctctgtatggatataaaattgaATGGCCCA
TCAGTGAGGTTAAGCATCGATAGACAAATCACAACGACAGATGAATTCGC
GCCACGGCACTTTTCTGCAGGCTAATCAGAAAGCAAGGTAAATTTACCTG
CACAAATATATAAACTTTGCTTCTAAGACGAATTTCTGACTGtttttttG
TTCTAGAAGCAAAGCTGAAATACTATGATGATTGACTTTCCGAGATGAAG
AAAAGTCTTTGTCAATAACTCTCCCTAATTTAAGTCAACCCATTGATAAT
CAGACCCTATACGCTTAATTTGCCAAGAACCCTTCACATggtttttgtat
aatttatttttaaatttaagtCAACCCATTGTTGAAGACCCATCTATCAC
GTGTTCATTATGTGGCAAAGAATCAGGTTTATGGCATTACAAGTCGCTCT
CCAGTCGCCGGAATGCCAAACAGCAAAAACTACATTTCGAATCCGCGACC
TCACAACAATCATTATCTGAAGATTTTATGTCATCAAGAGTATCAGTCAA
ATCTGAGAACAGTACACATTCGGGAAGTGTCACACACGAGCTCTCAAAAC
TGGCAACTAGTAGCGACTCTTTAGCCCATTCAGACCTTTTGAAGCCAGCA
GGATCTCAAGAATCGTTAGTCAATCTTAGGGTATCGGACAGTAAACACAT
GAGTATAGATCATGATCATGATGATGCAGACTCGATGGGAGGAGGACACT
ATCATAGCTCGCACCCTCCACACAGTATCATGAAATCATCCATCTTCAGT
GAGCCGGCCCGTATCCCTCTAGCCACCCCTCAAGAGTTGATGAAAGAGTT
ACTTTTGAGTACGGCGCCAGGAGGCCGGTCTCATCGATTTACAGCGACTC
CATCTTCAGCGAAGTGGGATCCGAATGTTTCGAGAAAAGGCTTGAAGATA
CGACAGAAAAAGATTTAGGTACGTCTTTAAAACGATTTAAGGGTGAAGGA
AGTCTTAATGAAATTAcgtttcttaaaaaacattttattttagttttttc
ttgcttttgttttcttctttctcttgtcattttAAGTCGATTCCTGAATT
AAATTAATACAGACCCAAACGGAAGCACTCCTTCGGgacaaaaaatcatt
attaaaTATTGTAGGTGTTTCGGATATATTTATGGTGTACAAAGTAATGT
GTATACATAATGTGTAGATAACGAGTCCTCTCATTTACCTACTTACAGAA
TTAGAGAAAGCGATTACCGAGAACCCACCATCCAGCCACCCAAACCACGT
CCAACAACAATGGATGAAAGAACTCTTATTCATGACTGCCGACAACACCA
ACATTGAAGCTACTGAATCGGTAATGAGTGAAATTGGTTCCATCTCTTTT
GACCGGAGATTAGACTCTCATTCCATAGCTCACACGCCGCGCGCCATGAC
GCCAGTACATCAAACGGAGGACGAAGATGGTGAACCGGTGAGAACGAAAC
GTATGCGTTTTCAGGTATGAAACGTTTTGGTTTACCTTTATAGCACATTG
CTATTTTCGTCTCGGTCGGAAAGTtaaagattttgatattttgttgcagg
ggggggggcaagcagttaaTACATAACACTATGTGTATTAActgcttttt
gaaatttttccaaagGACCACCACCCCTTGACACTTAGTACACTGTGTAT
TAACTGTTTTTGACCCATTAAATATATACACCAGCCCCAAAGTGCTTCTG
CAGCAGCTGACAAAAGGTGTACGAATCCGATTTTTGCCCTGCTTAAtcat
tgatatatttttttaatttcaaggaaCCCTTTGAAGAATCCTTCAATATG
CTTTCCGAACATCGTCATTGGTGTCCCTGGACCAATATATTATTGGCCTC
CCCGACTCACGATGACGTCCATGCGCCAGCTCAATCAGATAACGTTTCTT
CAACCACTAGCGGTTTCGAACGTACACCGAGGAATATTTTCGGTTCTCGA
ACACAGGCGTTACCGGGTTGGAAGATCGTGTTGATGACTATTTTTCCGGC
GCTTGGTCGAGATGTGAGCAGTCCAGTGGTAAactcttgaaaattttgat
aaaacataTCATGTATGAAATTATAGCCTCCGTATGTGGTTATATTTCTA
TCGAATTGCTTTTTGATTTACCTAATTCTTGTAAGGCAATGCTCGATGGC
TAAAAAAGCATGTTCAAATAGTGTAATTATTAAGATAGTCTACATATAAG
GGACTTTAATCATATAACTGTACCGTAAGCTTGACAATAGTAGAAATTTG
ATGATGTATACATCATTATTTCATATTGGTCAAAATGTTTATGTTATACT
TCTGTTTAAAAGAATACTCTTAGGTggcaaataaacggggggggttcgAT
TAAacggagggggttggaaaattttcgaaattttaataaacggggggggc
ctaattgccgcggggcgtttatttggcacctaagagtacgtcATGAgtat
catttttagaaatatttcaatgTCTACCGATTGTCTCTAAATTGTGTTTG
TTTTATACAGTCACCTCCACCACCAAACGAAGCTTGGAAATCAGTTCGTA
CACTTCTCGGTGATTGTGTATCTCCTTATAAACCAGCTGCTACATCATCT
ACCACTTCTAGTGCACCATCTTCATTGAACACATAGAAatgcaacaacaa
caaaaaatattccGTTCAAATTCAATTATCAAGGTCTACACAGTGGCTTT
CGTTGAATTTTATAACTATGGAAGCTCAATACGAAGTCTCAGCATTTTCA
TACTCTTCAGTTACTTTTTACAATGTGAAAGAAGGCAACCAATGTCAAAA
TATGAGGTGGACTGAGGAGTTTTATTATAGATTTTCCGTGTACATACCGT
CCGTACATACACAAACCGTAGGCGAAGGTGAAAAATTAAGCATCGATATA
TTATCAAAATATCTCGTACGTAAGATGATATCGTATAAATAATATTCCGC
GGCTGTTGGAAATTAACCAAACCTACGATTCCATACCTAATTGAAGACTC
GACAAATTACTTTTGATTCAACACATGCGTGCTTGTGATACCAAAAGAGA
AAATCCTTCTACCTCCTAGACTTGTTATCACTCCAACGTATTCGAGATGA
ATGAGATGGAGCATCTTGATTAAAATTAATCGCTAGTAGTATCCGGATAA
AAAGAATCGTGAATTTTTACCGATCTTGTCTGTAGAATGCGGTGTTTtgc
tatgtttttttttttaataaccaTGTATAGCTGTAGGGAAAACGGATTCG
AAGACCAATAATTTCCATCCGTATTcacgatattcatgacgtaatttctT
ATACGAAAGCACTCAAAATAGGCCGGGcttttgccactagttttattgtt
taaattcaaaatgagtGGCAAACCCCTGGTCTATTttgtgcttccgtata
aaacaatTATGGACATCACGAATCGTTTCGTATTTTTCATTCGACATGTA
CATACATTGACTAAATACAGCTAGAAGCCGACTCGCGTCAAATGTTTGTA
TCTACAAGCGTGCCGTAGCAACAACTCTAGTAAAACTCGAACCTCGTCCC
ATTTATCGTGTCTTTAGCACAACGGATGGTAAGTGTTTTGAGAAACCGAA
ATCATAGTTGAGTGCCTAATATTTACAGAATTATAACTTCACAACTCCTA
ATTCTTCTCTACGCCAAAAGTGCTCAATGAAAGCTCAGAACTTAAGAAAA
CGTTAAGAAAAAGGCATATATTATTTACGgaacttaaagtttcatgccGT
CCCTATGAACGACGATTACCAGCTaaatctataacttttcaattGAGAAA
TCTTATTTATACCATTGAAAGTATGGAAGGCAGAAATTAGCATTTTTTGC
CCCTCTTATTGTTTAGAAGGAACCCGAGGGTAGCCAGCGTGAAACCTTTT
GGAAAAGCGCCCCTATCAATCCCATAGCACTACTACTTTAactgcttttt
tcattttcgtttagtatgttttgaatttgtctgtacacagacccagtatc
tacggctattttcaaaattaattgccGTAgaggtctgttgtcattgtctc
atttaagatttttcaagCCGATCGCTGCAATGGAATGTTaatgagagagg
ggagacgatgagagaagtgttgctattttcaaatcatacttcatcgcaga
ggtctccgtacgtgaattttttcatcaaacagacaatgtgtACAGAgcgt
actacgaagcgataaacgtgagatacactctggtacagagtaatttTACA
TCCcttcttgttttcattttccaaacagttGGGAGAGTTGGGAGGCACTT
GAGAGAGTAAATCCAAATTATATTGATCTTCAAAATTTAGTGCCCGATAT
ataatttaatgtttttgatttaGAATTATGTTTTAGAAAATGATGATGAT
ATCTTTTAGAAATTATtatagaaaatttgatttttgattcgcTCGCTCTC
ACGATTATAAAAAGTTTAAACTGATTAtttttttAACCTCAAGAAAAATA
ATAGTCAATattgtaatttatttttaatgacaaAAGAACCATTTCAAACT
CCTTGtgttgtga Coding sequence (CDS) from alignment at sc0000084_pilon:7558..15170+ >MSTRG.11528.1.p1 ID=MSTRG.11528.1.p1|Name=MSTRG.11528.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3864bp|location=Sequence derived from alignment at sc0000084_pilon:7558..15170+ (Clytia hemisphaerica_ch_hm2_pilon) ATGCCTGATGATTGGGATTCCTCAGCTTattctGACATTTGTAATGAGAT CAAAGACAAATTGAAAATTGGACATCAAAAGCTCTGTCCTTGGCCACAGA ACCCCTGCCCACCATCCTTTTTGAGTTTACCCTCACGCTCAGCACAACAA TGGAAAATGGAGATTCGGTCAGCATTTTGTGGGTTGCTGGAGTTGAAAGG AAATCTACCTGAGTTGAATGAAGATACTGTAGCATCAATGAAAAGTCTGG ATAACAGTTGCATCGAGAAGCTTTTGACAAACGTTTTTCGCCATTCTTGT GATACAGATGATGAAGTGTTACAGGCTAAAGTTGCATGCATATTGGCTGT CACAGGCTGGAATGCAAGtCAACCCATTGTTGAAGACCCATCTATCACGT GTTCATTATGTGGCAAAGAATCAGGTTTATGGCATTACAAGTCGCTCTCC AGTCGCCGGAATGCCAAACAGCAAAAACTACATTTCGAATCCGCGACCTC ACAACAATCATTATCTGAAGATTTTATGTCATCAAGAGTATCAGTCAAAT CTGAGAACAGTACACATTCGGGAAGTGTCACACACGAGCTCTCAAAACTG GCAACTAGTAGCGACTCTTTAGCCCATTCAGACCTTTTGAAGCCAGCAGG ATCTCAAGAATCGTTAGTCAATCTTAGGGTATCGGACAGTAAACACATGA GTATAGATCATGATCATGATGATGCAGACTCGATGGGAGGAGGACACTAT CATAGCTCGCACCCTCCACACAGTATCATGAAATCATCCATCTTCAGTGA GCCGGCCCGTATCCCTCTAGCCACCCCTCAAGAGTTGATGAAAGAGTTAC TTTTGAGTACGGCGCCAGGAGGCCGGTCTCATCGATTTACAGCGACTCCA TCTTCAGCGAAGTGGGATCCGAATGTTTCGAGAAAAGGCTTGAAGATACG ACAGAAAAAGATTTAGATGCCTGATGATTGGGATTCCTCAGCTTattctG ACATTTGTAATGAGATCAAAGACAAATTGAAAATTGGACATCAAAAGCTC TGTCCTTGGCCACAGAACCCCTGCCCACCATCCTTTTTGAGTTTACCCTC ACGCTCAGCACAACAATGGAAAATGGAGATTCGGTCAGCATTTTGTGGGT TGCTGGAGTTGAAAGGAAATCTACCTGAGTTGAATGAAGATACTGTAGCA TCAATGAAAAGTCTGGATAACAGTTGCATCGAGAAGCTTTTGACAAACGT TTTTCGCCATTCTTGTGATACAGATGATGAAGTGTTACAGGCTAAAGTTG CATGCATATTGGCTGTCACAGGCTGGAATGCAAGtCAACCCATTGTTGAA GACCCATCTATCACGTGTTCATTATGTGGCAAAGAATCAGGTTTATGGCA TTACAAGTCGCTCTCCAGTCGCCGGAATGCCAAACAGCAAAAACTACATT TCGAATCCGCGACCTCACAACAATCATTATCTGAAGATTTTATGTCATCA AGAGTATCAGTCAAATCTGAGAACAGTACACATTCGGGAAGTGTCACACA CGAGCTCTCAAAACTGGCAACTAGTAGCGACTCTTTAGCCCATTCAGACC TTTTGAAGCCAGCAGGATCTCAAGAATCGTTAGTCAATCTTAGGGTATCG GACAGTAAACACATGAGTATAGATCATGATCATGATGATGCAGACTCGAT GGGAGGAGGACACTATCATAGCTCGCACCCTCCACACAGTATCATGAAAT CATCCATCTTCAGTGAGCCGGCCCGTATCCCTCTAGCCACCCCTCAAGAG TTGATGAAAGAGTTACTTTTGAGTACGGCGCCAGGAGGCCGGTCTCATCG ATTTACAGCGACTCCATCTTCAGCGAAGTGGGATCCGAATGTTTCGAGAA AAGGCTTGAAGATACGACAGAAAAAGATTTAGATGCCTGATGATTGGGAT TCCTCAGCTTattctGACATTTGTAATGAGATCAAAGACAAATTGAAAAT TGGACATCAAAAGCTCTGTCCTTGGCCACAGAACCCCTGCCCACCATCCT TTTTGAGTTTACCCTCACGCTCAGCACAACAATGGAAAATGGAGATTCGG TCAGCATTTTGTGGGTTGCTGGAGTTGAAAGGAAATCTACCTGAGTTGAA TGAAGATACTGTAGCATCAATGAAAAGTCTGGATAACAGTTGCATCGAGA AGCTTTTGACAAACGTTTTTCGCCATTCTTGTGATACAGATGATGAAGTG TTACAGGCTAAAGTTGCATGCATATTGGCTGTCACAGGCTGGAATGCAAG tCAACCCATTGTTGAAGACCCATCTATCACGTGTTCATTATGTGGCAAAG AATCAGGTTTATGGCATTACAAGTCGCTCTCCAGTCGCCGGAATGCCAAA CAGCAAAAACTACATTTCGAATCCGCGACCTCACAACAATCATTATCTGA AGATTTTATGTCATCAAGAGTATCAGTCAAATCTGAGAACAGTACACATT CGGGAAGTGTCACACACGAGCTCTCAAAACTGGCAACTAGTAGCGACTCT TTAGCCCATTCAGACCTTTTGAAGCCAGCAGGATCTCAAGAATCGTTAGT CAATCTTAGGGTATCGGACAGTAAACACATGAGTATAGATCATGATCATG ATGATGCAGACTCGATGGGAGGAGGACACTATCATAGCTCGCACCCTCCA CACAGTATCATGAAATCATCCATCTTCAGTGAGCCGGCCCGTATCCCTCT AGCCACCCCTCAAGAGTTGATGAAAGAGTTACTTTTGAGTACGGCGCCAG GAGGCCGGTCTCATCGATTTACAGCGACTCCATCTTCAGCGAAGTGGGAT CCGAATGTTTCGAGAAAAGGCTTGAAGATACGACAGAAAAAGATTTAGAT GCCTGATGATTGGGATTCCTCAGCTTattctGACATTTGTAATGAGATCA AAGACAAATTGAAAATTGGACATCAAAAGCTCTGTCCTTGGCCACAGAAC CCCTGCCCACCATCCTTTTTGAGTTTACCCTCACGCTCAGCACAACAATG GAAAATGGAGATTCGGTCAGCATTTTGTGGGTTGCTGGAGTTGAAAGGAA ATCTACCTGAGTTGAATGAAGATACTGTAGCATCAATGAAAAGTCTGGAT AACAGTTGCATCGAGAAGCTTTTGACAAACGTTTTTCGCCATTCTTGTGA TACAGATGATGAAGTGTTACAGGCTAAAGTTGCATGCATATTGGCTGTCA CAGGCTGGAATGCAAGtCAACCCATTGTTGAAGACCCATCTATCACGTGT TCATTATGTGGCAAAGAATCAGGTTTATGGCATTACAAGTCGCTCTCCAG TCGCCGGAATGCCAAACAGCAAAAACTACATTTCGAATCCGCGACCTCAC AACAATCATTATCTGAAGATTTTATGTCATCAAGAGTATCAGTCAAATCT GAGAACAGTACACATTCGGGAAGTGTCACACACGAGCTCTCAAAACTGGC AACTAGTAGCGACTCTTTAGCCCATTCAGACCTTTTGAAGCCAGCAGGAT CTCAAGAATCGTTAGTCAATCTTAGGGTATCGGACAGTAAACACATGAGT ATAGATCATGATCATGATGATGCAGACTCGATGGGAGGAGGACACTATCA TAGCTCGCACCCTCCACACAGTATCATGAAATCATCCATCTTCAGTGAGC CGGCCCGTATCCCTCTAGCCACCCCTCAAGAGTTGATGAAAGAGTTACTT TTGAGTACGGCGCCAGGAGGCCGGTCTCATCGATTTACAGCGACTCCATC TTCAGCGAAGTGGGATCCGAATGTTTCGAGAAAAGGCTTGAAGATACGAC AGAAAAAGATTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000084_pilon | genome | sc0000084_pilon:7558..15170 + |
|