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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:1231528..1235725- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11513.1.p1 ID=MSTRG.11513.1.p1|Name=MSTRG.11513.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4198bp|location=Sequence derived from alignment at sc0000083_pilon:1231528..1235725- (Clytia hemisphaerica_ch_hm2_pilon)
AGAGGAAATTAATCAAAAAATACACTAACAATCAAACAATGAAACAATGA
TGGAGGTCAGTGATAGAGTTGATCGTCAAAAATATCGAACACAAGAATAC
TGGGAAGAAAGATTTCAGCATGAGTCACAAGTGAATGAAGATAATGAAAA
TTCAAATGGAGCACATGAATGGTTTTCTACCTATCATTCTTTTAGCCATA
TTGTCACTGAAATTTGTCCACCTGACAAGTATAAAAGGATTTTAGGTAAG
ATTGAAGTTCTTGTGGATAAAAAACTCTGTAACTAGCACCTTTATCCGTT
CATTTTCATATTTCAAGAAGTTGACTTTAGCAAATTTTAGTCTGTCAAAA
CTTTCACTTTGATAAAGTCTGCTTTGGCATCATAACAGTATTATCATTGT
GTTACTTTTGCTACCTTTTCAGTTCCAGGAAATGGCAATTCTTCACTCTG
TGCTGAGCTTGTTGAAGATTATCCGAAAAGTCAAATTATTGGTGAAGATT
TCTCACCGTCTGTTATCCAATATATGTCAGAAAAATACAATGAGAAATCA
AATTTATCTTGGTTTGTTGGTGATATAAGAGATATCCAACTGCATGGAGC
TTCAAACACAGAAAATCTTTTGTATGACATGATCATTGAAAAAGGAGTAA
TAGACGCTCTAGTGGCTGGTTCAAAATCACCTTATGCTTCATATTTAGAT
CCTGAATGTCTAATAGATGTCGAACAGACTCTATTGTCGATTCGTAAATC
ACTTCATCGAGAGGGTCGATTTCTATCGATAAGTTTTGCATCACCAATGA
TTCGATTACCCTTATTATCTGGTGTTTTTGAGATTTTGGTTCATAGTTAC
ATAAGTGAGATGAGTGGCTTTGAGTATTATGTGTATGAATGTATAAATTC
AATCTGTGACAATGATGTGGATTTTCGTAAAAATATGGAAAACGAAATTT
TGAATTCTGATCCAGTTGATTTGCCAGAGACTGATCCTTTGGCTATTGGA
GATGTATTTGCTTAATTTTCTTCTGGTAAAGAGTAACTTTCAATGAATGA
ACATCAACGCACATGCTTAACACGTAAGACAAGTAATGACTTTTTATGTT
TTTGTGCAGAAGATTTCGATGAAAGACAAGATAAAATCACAGCAATCAAT
TGTCATGGGCTTGTATCTCTCATAGGTTATCGAGTTATCTGATATTCTTC
TTAAATTTCAAAATTTCCTTTTCTTTTTCAGGTAACCTAAATTATCACAC
TTCACTTTCAAGAATTACAAAGTTGGCTGGCTGATCGGTTGTCAGCTTTG
AAAAAAAGCCTTGAAATTGAATGCTGGTTGGGACAAAAATTCACTTGATC
TGGTTTAGGTATTTTATTATAATTTTACATTTGGCTGGCTGATTTTATAG
CGGAATCATTTCCAGTTTGCAAATGCTGAGCATTACGAAATTAATAAACA
TTTTGACGACAGAAACGAGAAAGAATAGGATCCAACATTTGAAGTCATTT
TCCAAAAATCTAATAGGTCAATCAGAATATTAATTTGGGTCAAAAGGTTG
ATACGATAATATGATAAGTGTTTGAAGGTTAAGCTAACATCTACTAGGTG
TTAAGATATTTTTTCTTGACTAGAAACTTTTGGAATGCTCCTGAAATCTC
AATTATTCTGTTGGACACGTCATGGTGGCTAATCATGACTCTTTCAGAAG
GGAATTTATCTATTCAACTCTGACATCTTAAAACCACTCTTGAAAAATTC
ATTTAATCACATCTTTCATTATACCTCCATGATAATTCCTTCCATATGAA
ACTCTACCATATGAAACATGGATGGAGAGCCTTTTCAATCGCAACTCCAG
GTCCTCTTGCATGATTTCAACTGTTTTTCTTCCATTTCTTTTTGGACGAG
CTTTGTTAGTTCTCCAAGATTTGATCCACTAAATTTTTGCACTTTCTTAG
CAAAATTTGTATATCTCGGGACTTTCAGCTGCTTTCAGACATTTTCGGTG
ACTGAAGCTTTGATTTTGTCTTTCCAACAAATTTTTGCGTAATGTTCCAT
TGTATCTCCATGCTGGTTTGTCTTTCAAAGGTGCTAGTGCATCATATTAG
CACATTGATTTTGATTGACTTTTTAACTCCGATCGACCATACTAATTTTA
ATAATTGTTTGTTATTAAGAAAACATTAAGTATGTTGGGCTATAAGTTAA
AAATTATTTACATTGATTAAATTAATTAAAAAGGAATATATCACAGCTTC
ACTCATTTTTTGAATATTTTCTATTTTCGCTCATGAAAAATCACAAAAAT
TGGCAGGAACCTGTTTGGAACCTCCTCAGAGGTCCTATAAATTAATACAT
GTTCGTTCGTTCGTCCGTCCGTCCATCCATCCGTCCATCCGTTAGTTCAG
TTGAAGTTATAGTGAAAGGCTTGGTAATCCTTTTTATGCCATGTAACTTG
ACATTTGCTTCTCCATTTCCTTTATAGTTGGAAGTACGATAGGTTCAGGT
TTTGTATCGGCAACTGCATGTTTAGCTTTGAATGTTCCTTTGGATTTTTT
CTGAACACCTAGGTTTTATCGATTTTTCTAGAATCAAACTTCTTCACTCT
ATCGATGAATTTCCAATGATATGTTAATTACGGGTTCTCTTTCACAATAA
AGTTAAACTTCTGTTTTTATTGTTTTATACTATTTGAAAGGCTTCACAAG
GCAAAGTTTCTTATTTATAGTAAATTGTTGGAACCTCGATGGTTCCTGAT
GCTTTTCAGGTTTAGTGTATTTCATAATATAATTTAAAGAAGCTTGAATT
TTAGCATCTTTTAAAATCACAAAATCGTCCCAAGAATGAAAACTTTGGTC
AAAAGAATGCTTAAAATAGAAACAGAATTCACACCTTTTCCTTAAGAACC
AGGTGTTCTTGCCAATGTATCCCACTTTTTCAATTATGATGAACTTTTTT
GATATGGAGTATTGCTTTTGAAGGTAAAGAATAAATTCCTTCACATCGTC
CTTTTTGACTTTGCTCCCCAAGGTTATGGCATAGCCAAAAGCTGACGTCA
AGCAGTTTTCCAGGTGTTGGGTGGTAGTGAAAGCATCGAAGTCTAAAACA
TAGTCCTGTTGATAAGACTGGATAAGATGAGAAAATTTTCGTTAAAATAC
AATGCTTAGAATATAAAGACAATTCACACATTTTCCTTTAAGAACCAGGT
GTTCTTGCCAATGTATCCCACTTTTTCAATTATGATGAACTTTTATGATA
TGGAATGGGTTTTTCCAGAAAAAAATCGTGCACCCCCTGTTGAGGAGGTC
CATTTCCGTTCCAAGGGGGGTAAGGTTTGAAATGCAGTGGAATTCCATAA
AAGGGTAGACGAAAATCCGTCAAAAATAAGCTGAATTCCAAGGGGGTAGT
GATTGAAAATTTGTAAAAATTCGGAATTCCAGAGGGGTATGATAATAAGA
TAATAAATCTTTCTTTGATTGTACACATTTCAAATTTTAAAAACTTTTTT
GATGGTAAAAGAAATTATCAAAATTCACACTTCAACTTCTTTTAATGGTA
ATGAATTGTAGGTTTGTAGCCTTTTCTAAGAATAAAAGTATTTTTTTATT
CTTGAAGTCATCTTTTTCTGCTTTTTTTTGGTTTTTTTTTTTTTTTCCTT
TATTTTCCTTATATTGTAACTTTGTTTGTCTTTTCCACCTTCTTTCATCC
ATATGAAATACGAATTCTTTAGGAAATGATAGTTATTGAGTTATTTCTTC
TTTTCTTATTGTGGTTGGATGATGAAGAGAAATAGAGGGACAGTTTACGG
AGGTTCCCCGAAAATACGATTGTTTTCGCTCCATATAGAATTAACGTTTT
ATAATTTTCATTCCGCGATGAAGAAGGCGTTGAATTCGTCGTCCCACTTA
CTTCCATCACATTCGAATCCTTAGAAAAAGAAGTAAAACATCAATGATAA
TTTGACTCCTATTAGAGTATCACTCTAACCTGCTATGTTTCATCAGTCTG
CTCAAATTCAAATAGTCAAACAAGAAAGTTTTGGAAATTTCTAATTAAAC
TCCGTACGAAATATTCAAAATCTCTTACCAGACACCATTGGTGAAGCAGG
TCAAGACAAGAAGAATATTGTGAGCTGCGTAAGCTTTTGTTAGGGTGTAT
TTCGTGTTATTACCCATCAGATCACTCGTGACGAATTGTACGAAGGAC Coding sequence (CDS) from alignment at sc0000083_pilon:1231528..1235725- >MSTRG.11513.1.p1 ID=MSTRG.11513.1.p1|Name=MSTRG.11513.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1584bp|location=Sequence derived from alignment at sc0000083_pilon:1231528..1235725- (Clytia hemisphaerica_ch_hm2_pilon)
TTCCAGGAAATGGCAATTCTTCACTCTGTGCTGAGCTTGTTGAAGATTAT
CCGAAAAGTCAAATTATTGGTGAAGATTTCTCACCGTCTGTTATCCAATA
TATGTCAGAAAAATACAATGAGAAATCAAATTTATCTTGGTTTGTTGGTG
ATATAAGAGATATCCAACTGCATGGAGCTTCAAACACAGAAAATCTTTTG
TATGACATGATCATTGAAAAAGGAGTAATAGACGCTCTAGTGGCTGGTTC
AAAATCACCTTATGCTTCATATTTAGATCCTGAATGTCTAATAGATGTCG
AACAGACTCTATTGTCGATTCGTAAATCACTTCATCGAGAGGGTCGATTT
CTATCGATAAGTTTTGCATCACCAATGATTCGATTACCCTTATTATCTGG
TGTTTTTGAGATTTTGGTTCATAGTTACATAAGTGAGATGAGTGGCTTTG
AGTATTATGTGTATGAATGTATAAATTCAATCTGTGACAATGATGTGGAT
TTTCGTAAAAATATGGAAAACGAAATTTTGAATTCTGATCCAGTTGATTT
GCCAGAGACTGATCCTTTGGCTATTGGAGATGTATTTGCTTAAATGATGG
AGGTCAGTGATAGAGTTGATCGTCAAAAATATCGAACACAAGAATACTGG
GAAGAAAGATTTCAGCATGAGTCACAAGTGAATGAAGATAATGAAAATTC
AAATGGAGCACATGAATGGTTTTCTACCTATCATTCTTTTAGCCATATTG
TCACTGAAATTTGTCCACCTGACAAGTATAAAAGGATTTTAGTTCCAGGA
AATGGCAATTCTTCACTCTGTGCTGAGCTTGTTGAAGATTATCCGAAAAG
TCAAATTATTGGTGAAGATTTCTCACCGTCTGTTATCCAATATATGTCAG
AAAAATACAATGAGAAATCAAATTTATCTTGGTTTGTTGGTGATATAAGA
GATATCCAACTGCATGGAGCTTCAAACACAGAAAATCTTTTGTATGACAT
GATCATTGAAAAAGGAGTAATAGACGCTCTAGTGGCTGGTTCAAAATCAC
CTTATGCTTCATATTTAGATCCTGAATGTCTAATAGATGTCGAACAGACT
CTATTGTCGATTCGTAAATCACTTCATCGAGAGGGTCGATTTCTATCGAT
AAGTTTTGCATCACCAATGATTCGATTACCCTTATTATCTGGTGTTTTTG
AGATTTTGGTTCATAGTTACATAAGTGAGATGAGTGGCTTTGAGTATTAT
GTGTATGAATGTATAAATTCAATCTGTGACAATGATGTGGATTTTCGTAA
AAATATGGAAAACGAAATTTTGAATTCTGATCCAGTTGATTTGCCAGAGA
CTGATCCTTTGGCTATTGGAGATGTATTTGCTTAAATGATGGAGGTCAGT
GATAGAGTTGATCGTCAAAAATATCGAACACAAGAATACTGGGAAGAAAG
ATTTCAGCATGAGTCACAAGTGAATGAAGATAATGAAAATTCAAATGGAG
CACATGAATGGTTTTCTACCTATCATTCTTTTAGCCATATTGTCACTGAA
ATTTGTCCACCTGACAAGTATAAAAGGATTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:1231528..1235725 - |
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