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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:1181284..1186694+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11507.1.p1 ID=MSTRG.11507.1.p1|Name=MSTRG.11507.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5411bp|location=Sequence derived from alignment at sc0000083_pilon:1181284..1186694+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTGCTGTAAAACCCTTTTtatttagaataaaataaattaatcaGACTTT
GATACTTCACAAAACCGCTAAATTTCGGGGATGCTATGGTTGATATCTGA
AAACTTGTCACTTAATCCATCCCTACGCAGAACTTTGAAGCCCGCAAGAG
GATATATATTATAGTTGAAAACGACTGTCCGATGCCGAACGATTTTTAAA
ATCGGACGCAAGACAAAATTGGTTGATTTTATTAAAGACAATTTTCTCTA
TTATCATTAGGGGATAACTTGTTTGTACCTTTCCATATTCCCAATTTTTA
CACCCTTGCATCGCATTTTCTCCTGGTAGCCTGATAATCTTCACTGAATG
ATCAATCAAGATACATGGAGATAAGCAATCTCTAGTTCGAACAATGGTCA
TTGTTTTCCATTGTTCTTAACAATGTCTTCGCATGCGCACACTCCGTCGG
CGTGACGTTCAAAGTGGcgattttcttacactgattaGTGACGTgtgaat
tttttcatattttgattgattGCATCACATTAGAAACCCCAGTGAggcta
tttttctttatttccacCCCTTTGGGGTTTCCcttaaaaaattgacaaat
tggACTCGTTTATccaaaattgttcaaatttgTTTTGTGGTAGTTGCACG
AGGAGACACAAGTTCAAGAGAACTAAGTCAAGTTTAAGACCTATCACTGA
CTTCAAAACAGAGATATAAGCATTGTTTGACGCTGATGTGTTAAGTGGCA
TTTATGCCCCACCTTATATTTGTGGAAGAGGGAAAGCTCGAACTCAAGAG
AAAACATCCACAATACTCGACTCGTTGTTTGCCAGTATTAGACAGCTTGC
AGAGCTCAACATGAACTCCATGAACTTTACCAAAAGTTTGATCCAGTATA
GTCAATGAAAAAAGTTAATGAATTTTTCGAAATGTTACCATTGTACAATG
TATGCGAGGGTAATACGAGATATGAGGAAGTTGTCAAGAAAAAAGTAGAT
AAGGGAAGTGATCTAACATTTATCGACAAACAAGGAAAAGTTGCTACTTG
CATTGAATCACCTGCATTCAACCAAATCAATCCAGACAAGCTGACAATCC
GACATCTAAATTGTGAATTGGTAATAATATTAAATGTAAAGCTTGTGCAG
ACTACGGACGTAAAATTTCATCTTCAATGTCCAGCAGGGCTCAAAAACTT
CCTGAGACTAACCATCCAAACATCAAACATTTATCTTACTCGCCAACAAT
AGACCTTATTCGGAgtatttgatttttctaaaaaagcgatgcattgtggg
attgttttggaagtattacaatagaaatctcttaggaattcctcgaggga
attctattgtaatacttccAAAACAGTTCCACAatacatcgcttttttag
aaaaatcaaaagctccgataaggtctattggaaGAAAAAGCCAAAACATT
ACAAAGGGATAAAAGCGATAAAACTACATAATGAAATTAGACGCTTGCAG
ACAAAAGTAAGAAAGCTAATGACTAATGAAGCCGTGACATTGCCTGATGC
ATGGAAAGATTCCTTTTCCTATATTTCTTGGACCAATAacgaaatttgtt
tattttattttattttatccagGCCAGATTGTAGCTTGTGCTAGCTATGT
AGTTGAGTTATCACTGGGCCTGCATTCAGTAACTTCTACCTCATATTTTT
AAACGGCCGTTTTACATCTACATGGTAACTGATAATTATTGATGTCTCAT
TGCTTGAACTTCTCGAAACAACATTGAGATGATGTGCTACTTTCTCATCA
TCTTTCAAGGAGAAATTGATGAGATTTCGTTAGCAGACACCAGGGCTCGA
ACCTGTACTGTGATTCACTCTTGAATGAGATAACCGCGTGTTGATGGAGT
TAAACATTGGAGTTCTTTCGAACGAACTATTTTCCGTTTGTTTGCGTGAT
CTTGTGTTTGATGTAAGCACTTTCTGCACTAAAATTCAAACCCCCTCCTT
TTGAGGAATATATACACTTAGCGTCAGCCACATTATATCaccttaaaatt
tttgattaagGATAGCATATACAAAATGTCACAGCAATAGGAGTTATTTT
TAACCATGTTCTTTGGCTTCTGTTGTTTTTACAGCAAAAAGATCCTCAGA
GAAAAAAGAGATGACCGTTATGACATTGAAATTAcacatttaaaattatt
tttgtccattGGACATAATACCAAAGAAATCGCTGAAAAAGCGTTACTTG
GCGGTGCTATGCAAAGAAACACTCTGACCAGTTTCATGAAAGACACATAA
CATTCCTACACCAAGGGAGCGCTATTCTTTTCCGATGATGACCTTTTGCT
TCTCATTAGAAAAATAGCTTTGGAGTTTCCGAACTCTGGTATTCATGAGG
TTACTGCTCTTCTTCGGACTGGAAATTCTCCTCACATTGTTCAACGTGAC
AGGGTAGTTGGTTGTGTGTTGGATGTTGGCTTGTGAAATCTGTTTGAGCT
ACTGAagtgaattaattttcgcgtagATTAATTTCGACTTTTAAGAACTT
GGAAACTtttggattaatttttttagtgttgtaaattctttaattttacT
CGCACTCATCATAATGCCAAATAGATCGACATGGTCGAAGAAGAATACAA
CACTGGACAACCAACGAACGTTCAGCCAGCGACTGGGAAACTACGAAACT
ACGAAACTACGAAACAAACTGAAGCATCACCTAAAGCTCCCCGAAGAAGG
AAGGTAGCCAACTTTGTCATACACAGTTGTATTGATGATTCCAGCCGATT
AATTATTCATTTGAAAGTACATACAAATAATCTAGCTAAAACGATGGTGT
GTGACTTTATTGAAGAAACAAACTGAAGCATCACCTAAAGCTCCCCGAAG
AAGGAAGGTAGCCAACTTTGTCATACACAGTTGTATTGATGATTCCAGTC
GATTAATTATTCATTTGAAAGTACATACAAATGATCTGGCTAAACGATGG
TGTGTGACTTTATTGAAGGCGTGAAAGTGTCGAGTGTTCCAATTCGCGTA
AGAGCAGATCATTTGTACAAGCCAAATCTTTGATGGAGTCCCTGAATTGG
TCTGACCACAACGCCTTTATCCTTGGAAAGTCCGTTCATAATGTTCGCAT
TGAACAATTATGGAGAGACGTGTTCTGTAAGGTAGACAACAAATATTACA
ACATTTTCAATATCATGGAAAATATGACATTCTTGACGTCGAAAAGGAAG
TTTATATCGCGGCTCTCCATCAGCATCACGTCTCATCATCTTCATCTCCG
TCATCTCAATAAAACCCCTACATCATTTCCGTTGAAAACCCGACAAAACA
GCAACaaaaaaaCGTCAGTTTCGTGAGCCCTTACACTGATGACCCTGTAA
CAGAAAGGTTTACAAACGTGAATTTCTAACTTTGATGATATCCTACTCTC
CACCATCTACCATCCGCCAACAACTCCACCGAATTGCTTGGTTTCCAGCT
CGATGACGACAACAACCCCTACTAAGACCGAATCAGACTAAAGCGAAATC
CTTCATGGATCTGTGTCTGGAATCTCTACTATCAAGCGACACTACACTAC
CACCCAGAAATGCACTTTAAGGTTttcatttgcttgaaaaaaagcAGAAA
GATCAGGGCTATGACTCCGCCTATGAATACGTCAGCAagttgttgaaaaa
atgaaaaatctttagAGACATGACATTTGCTTTTATTTTGACGCAGTTGG
CCATTTTGATCAAGCGAAAGCACCCCTCATCCGCACTATGGCCTGGTAGC
GACAGACGACGGAAAAGACTTTGAACGTACTGCCAAGGAAGGCAGGGGGA
CGAGTCGCCAACTTCTTCTGTACCATTTCCTACGCCGGAGGAATAGTCCT
GGCGGAATAGTATCATGATCGTTTGAATGgagacaaattttgaaaaaagc
ttcCACCCAGTTGGTGTGGCCCGAAAGCCGAAAGATCCTGATGTACGGTT
GTCTCGTTCAAAATTGCAAGAAGGCCAAACAAGCACTCAGTGACATTACC
TGTGGTGTTTCAAAATACCCGCCCAAAGCCCTGACTCAAATCCGATCGAG
AACACTTTTCATTACTAGGTCGAAGAACAAATACGCGAAGAGGCCATTGT
CAAATGCATTACCTACTAGAACTTTTAGTCACTTTACATCCATGCTACGC
ACATTTCACGTTGGGGTCCTATAGAAATCACACCGAATCAGTTCATGTCA
CGCATGTTACGAAAATCAGGGAAATGATATAATAAACTTAAAGACCGGCC
GTGTCGCCACGCCCAAATTTTCTTTTGCTCTAATTATTTATTTGCGATAT
AATAGCGTCGGATCTGTGTTGTACCAGAAATTAAAAATGGCGGATATGAC
AGTCGGTATCCCTAACCTTGAAGCATTCACCTTTCCTGTTATATTTAGCT
GTTATTGTGTCTATGGCTACAACTCTTTTTGTTGATAGTTTTATGTTGAC
CTTTAAGGCTTTATGTTTCTAATTTAAGCACAAGAAATATTATAAGAAAA
TACTAGAAAAttacttatttacttacttacttacttattgaAGAAACAAA
CTGAAGCATCACCTAAAGCTCCCCGAAGAAGGAAGGTAGCCAACTTTGTC
ATACACAGTTGTATTGATGATTCCAGTCGATTAATTATTCATTTGAAAGT
ACATACAAATAATCTAGCTAAACGATGGTGTGTGACTTTATTGAAGGCGT
GAAAGTGTCGAGTGTTCCAATTCGCGTAAGAGCAGATCATTTGTACAAGC
CAAATCTTTGATGGAGTCCCTGAATTGGTCTGACCACAACGCCTTTATCC
TTGGAAAGTCCGTTCATAATGTTCGCATTGAACAATTATGGAGAGACGTG
TTCTGTAAGGTAGCCAACAAATATTACAACATTTTCAATATCATGGAAAA
GATGACATTCTTGACGTCGAAAAGGAAGTTTATATCGCGGCTCTCCATCA
GCATCACGTCTCATCATCTTCATCTCCGTCATCTCAACAAAACCCCTACA
TCATTTCCGTTGAAAACCCGACAAAACAGCAACaaaaaaaCGTCAGTTTC
GCGAGCCCTTACACTAATGACCCTGTAACAGAAAAGTTTACAAACGTGAA
TTTCTAACTTTGATGATATCCTACTCTCCACCATCTACCATCCGCCAACA
ACTCCACCGAATTGCTTGGTTTCCAGCTCGATGACGACAACAACCCCTAC
TAAGACCGAATCAGACTAAAGCAAAATCCTTCATGGATCTGTGTCTGGAA
TCTCTACTATCAAGCGACACTACACTACCACCCAGAAATGCACTTTAAGG
TTttcatttgcttgaaaaaaagcAGAAAGATCAGGGCTATGACTCCGCCT
ATGAATACGTC Coding sequence (CDS) from alignment at sc0000083_pilon:1181284..1186694+ >MSTRG.11507.1.p1 ID=MSTRG.11507.1.p1|Name=MSTRG.11507.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=348bp|location=Sequence derived from alignment at sc0000083_pilon:1181284..1186694+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAAGTTAATGAATTTTTCGAAATGTTACCATTGTACAATGTATG
CGAGGGTAATACGAGATATGAGGAAGTTGTCAAGAAAAAAGTAGATAAGG
GAAGTGATCTAACATTTATCGACAAACAAGGAAAAGTTGCTACTTGCATT
GAATCACCTGCATTCAACCAAATCAATCCAGACAAGCTGACAATCCGACA
TCTAAATTGTGAATTGGTAATAATATTAAATGTAAAGCTTGTGCAGACTA
CGGACGTAAAATTTCATCTTCAATGTCCAGCAGGGCTCAAAAACTTCCTG
AGACTAACCATCCAAACATCAAACATTTATCTTACTCGCCAACAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:1181284..1186694 + |
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