MSTRG.11504.2.p1 (mRNA) -

Overview
NameMSTRG.11504.2.p1
Unique NameMSTRG.11504.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:1151041..1152836-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11504.2.p1 ID=MSTRG.11504.2.p1|Name=MSTRG.11504.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1796bp|location=Sequence derived from alignment at sc0000083_pilon:1151041..1152836- (Clytia hemisphaerica_ch_hm2_pilon)
ATTATAACTTTGATTTGCTGACACTCAATCTTACAGTTTTGACAACTTTG
ATTCTCTTTAAAAGAGGCTTTTTCAACAAACCAAACTTAGTGCACGCTGA
ACTTCGACGTGGTTACAATAAAAAAAATGGGTCTCAAAGCTAAATTCCTT
GTTATTGTTATAGCCTTCAATCTTTGGGCCGTGTCTGCAACAACATGGGA
TAATTTCGTCAAGAATCTCTTGGAAACCATTTCTGACCCGTGCGTTCCAT
GCAAGCCATTAAAAAAGAGCAAGTATTGTGATTGCAGAGATGTTACACCA
ATGGAAGACTGTAAATCGTTCTTAAAATCTGGATACTCCAAAAGTGGGTT
ATACACACTGCCGAGCTCACGTTTCAACAAATTGACAACTTTTTGTGACC
AGGAGACTATGGATGGTGGCTGGACAACCATTTTACGGCGAATGGACGGC
TCTGTTGATTTTGCTCGAAACTGGCACGACTACAAAGTTGGTTTTGGTCG
ACTACAAGGTGAATTCTGGTTTCGGAAATCAAAACATCTATGATTTAACT
AAACCACAAGTTGCTCCTAAGAAATCCCAACTTTTGATTAATATGTTGGT
TAAAGGAAAACCTGTTTTCGCATTATACGAATCTTTCGAAATTGGTAGTG
AGGCGTACAAGTACATTTTGAGGATTAGCACTTCAGCGAGTGGTAATGTA
TCGGTCCCCAACAGCTTCGGTCATTACCATAACAACATGAAATTCTCAAC
CTACGACTCCGATAATGACAGGAACAGTAGAAGCTGCTCACAAATATATG
GAAATTCAGGTTTGTTTTGTTTTCAATATCATTATTATTGGGAAATTTTG
TTAAGAAAGTTTTGAAGAAATTAAGTGTAAATTTTCTTGATAAAGCACGA
TTTTTTGCTTAGTGCTTATATATCTGTATAATATCTAACTAAACTTTATA
CTTCGTTCCAGGTTGGTGGTTCAACACTTGTCATGTTACCCTGTTGACGG
GTGTTTATGACTTGAAAAAACCTCACACTGGTGGCATTGTATGGCGATGG
AATGACAAAACAGTTCCTAGCTTTGTCGAAATGAAAATCAGAAGAAAAGA
TTAAATGTCAGAGAGGCAGTCTACTAGTATACATATTATAAACTTCTCTA
GTGTCGGTCGGGGGGAGGGCGCCTAGGCAAAATTGGGTACGGGGACGTAT
GCCGCTGGCCAGGGTCACTTTTTAGGTTCTGTATATATTTGACAGGGTTC
CAAATTTACTAAGTTTCAAGATTTCTATCTGACAAGGTCGACTTTTGGTT
ATTTTGCACAATTTCTAGAGTGGTGATTAGAAAATCTTTCAATTTTTCGA
CTAGTTTCAGTCATTTTTGCCTCGATTTGTCGTACTGACAGGGCCCCAAA
TTTACCAAAAATTCATATCTGGCATGGTCTACTTTGTCTACTTTTCAAAC
TCCAGCGGCACGTCCCCGGTGACCGTCAAGGTCAGTGTCTCCCCACCCCG
GGCTCTGGTGTAAAAGAAAATGTTTACTGATTTTTGTGGACTCGGACTTG
CCCTAAGTTATATTAAGTATTGAACAAGCAGGGTTCAATGTTTATGAAAG
ACATGCGAGTCGAGTATTATAGGCTAAGCTTTTATTGACCATTATATCAT
TGTAAAAAGGTTTACTAACTTTGGACTTAAACTTGTTATTTTGAATTTTC
TTTAATTGTATTATCAACTTCGTCATTTGTTTTACAGTATTGTAATTTTC
ATATTTCTTATTTCTCTGAAATAAAACTTTTAGCATTTAATTTCGA

Coding sequence (CDS) from alignment at sc0000083_pilon:1151041..1152836-

>MSTRG.11504.2.p1 ID=MSTRG.11504.2.p1|Name=MSTRG.11504.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000083_pilon:1151041..1152836- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGGTGGTTCAACACTTGTCATGTTACCCTGTTGACGGGTGTTTATGAC
TTGAAAAAACCTCACACTGGTGGCATTGTATGGCGATGGAATGACAAAAC
AGTTCCTAGCTTTGTCGAAATGAAAATCAGAAGAAAAGATTAAATGGTGG
CTGGACAACCATTTTACGGCGAATGGACGGCTCTGTTGATTTTGCTCGAA
ACTGGCACGACTACAAAGTTGGTTTTGGTCGACTACAAGGTGAATTCTGG
TTTCGGAAATCAAAACATCTATGATTTAACTAAACCACAAGTTGCTCCTA
AGAAATCCCAACTTTTGATTAATATGTTGGTTAAAGGAAAACCTGTTTTC
GCATTATACGAATCTTTCGAAATTGGTAGTGAGGCGTACAAGTACATTTT
GAGGATTAGCACTTCAGCGAGTGGTAATGTATCGGTCCCCAACAGCTTCG
GTCATTACCATAACAACATGAAATTCTCAACCTACGACTCCGATAATGAC
AGGAACAGTAGAAGCTGCTCACAAATATATGGAAATTCAGGTTGGTGGTT
CAACACTTGTCATGTTACCCTGTTGACGGGTGTTTATGACTTGAAAAAAC
CTCACACTGGTGGCATTGTATGGCGATGGAATGACAAAACAGTTCCTAGC
TTTGTCGAAATGAAAATCAGAAGAAAAGATTAAATGGTGGCTGGACAACC
ATTTTACGGCGAATGGACGGCTCTGTTGATTTTGCTCGAAACTGGCACGA
CTACAAAGTTGGTTTTGGTCGACTACAAGGTGAATTCTGGTTTCGGAAAT
CAAAACATCTATGATTTAACTAAACCACAAGTTGCTCCTAAGAAATCCCA
ACTTTTGATTAATATGTTGGTTAAAGGAAAACCTGTTTTCGCATTATACG
AATCTTTCGAAATTGGTAGTGAGGCGTACAAGTACATTTTGAGGATTAGC
ACTTCAGCGAGTGGTAATGTATCGGTCCCCAACAGCTTCGGTCATTACCA
TAACAACATGAAATTCTCAACCTACGACTCCGATAATGACAGGAACAGTA
GAAGCTGCTCACAAATATATGGAAATTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11504MSTRG.11504Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11504.2.p1MSTRG.11504.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11504.2.p1.exon3MSTRG.11504.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11504.2.p1.exon2MSTRG.11504.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11504.2.p1.exon1MSTRG.11504.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:1151041..1152836 -