MSTRG.11500.1.p1 (mRNA) -

Overview
NameMSTRG.11500.1.p1
Unique NameMSTRG.11500.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:1075614..1076689+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11500.1.p1 ID=MSTRG.11500.1.p1|Name=MSTRG.11500.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1076bp|location=Sequence derived from alignment at sc0000083_pilon:1075614..1076689+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGGAACATTGTTGATTGTATTTTTAAGATTTATCAATTTATCAAACTGT
TCAAAAACGAAGAAAATACAAGTCAAATAAAAATGTATTCAGAATTGATA
TTGTTTGCACTGACTGCATTGGTGATTGCACAATATGACCAACATATGCA
TTGCTACAACTTGACATCCAAGAATATCAACTCTAATTCTTGCTCAAATA
ATGTAGGACAGATGGGGTATACGTTGCAAAACATGAATCTAGTGAACTTG
ACTGAACATGATCTCGTTATAATACGAGAAGAATTGTTGAAGCATGGAGT
GATATTATTCCGTAATCAAAGTATGACCAGAAAACAACAAATTGATTTCA
CTGAAAGAATTGGTACCCTTATTCCTTTACCAACATTTCTTAATTTGAAA
GATCCAGAGATCGGGTTTGAGAGCAAGATCCTGAGAGTAACAAATTATGA
TTCAAAAGGTTTGCCAAAGAAACAAAAGGAATTAAACGGTCAGTACTGGC
ATAAAGATGGAAATTACATGCAAAATGATTACATTGGTAGTATGCTTTAT
GCTGACGAAATTGACGAATTTAATGGAGATTCAAGACCGACTTTATTCTT
GGATAATTGTTTGATGGACGTATACCCAAAAGCACTTCTTGACCAAGTCA
AACATCTTGCTAACGAAATCAATATCGGTACGATCAAAGATTTCACCGTG
ACTGAAGATGATATGAAACAGCACCCACCAGTATTTCCAAAAGTGATTTC
AAAACATCCACAAAATGGCAAAGATTGTTTATATTTGACCGAGTTTTTAA
CATTGAATGGTAATTCAACTCAAAAGGAACAAGAAATAATCGAACAGCTG
TGGGATACTATGATTAAGGAAGCACCAAAATATTCACATCATTGGCGTGA
AGGAGATGTTGTGATATGGGACAACTTGGCAGTAATGCACAGAACAGGAC
CTGTCACAAAACAATCCATCATTGGTAAGCGGATGATGTATAGAACAACA
TATTTTATCTAACAAAACTGTCGAAGGAGATTAGTGAAACTCTCCTGAGC
ACGCAACGAATTGGTTTTTATAAATT

Coding sequence (CDS) from alignment at sc0000083_pilon:1075614..1076689+

>MSTRG.11500.1.p1 ID=MSTRG.11500.1.p1|Name=MSTRG.11500.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=930bp|location=Sequence derived from alignment at sc0000083_pilon:1075614..1076689+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCAGAATTGATATTGTTTGCACTGACTGCATTGGTGATTGCACA
ATATGACCAACATATGCATTGCTACAACTTGACATCCAAGAATATCAACT
CTAATTCTTGCTCAAATAATGTAGGACAGATGGGGTATACGTTGCAAAAC
ATGAATCTAGTGAACTTGACTGAACATGATCTCGTTATAATACGAGAAGA
ATTGTTGAAGCATGGAGTGATATTATTCCGTAATCAAAGTATGACCAGAA
AACAACAAATTGATTTCACTGAAAGAATTGGTACCCTTATTCCTTTACCA
ACATTTCTTAATTTGAAAGATCCAGAGATCGGGTTTGAGAGCAAGATCCT
GAGAGTAACAAATTATGATTCAAAAGGTTTGCCAAAGAAACAAAAGGAAT
TAAACGGTCAGTACTGGCATAAAGATGGAAATTACATGCAAAATGATTAC
ATTGGTAGTATGCTTTATGCTGACGAAATTGACGAATTTAATGGAGATTC
AAGACCGACTTTATTCTTGGATAATTGTTTGATGGACGTATACCCAAAAG
CACTTCTTGACCAAGTCAAACATCTTGCTAACGAAATCAATATCGGTACG
ATCAAAGATTTCACCGTGACTGAAGATGATATGAAACAGCACCCACCAGT
ATTTCCAAAAGTGATTTCAAAACATCCACAAAATGGCAAAGATTGTTTAT
ATTTGACCGAGTTTTTAACATTGAATGGTAATTCAACTCAAAAGGAACAA
GAAATAATCGAACAGCTGTGGGATACTATGATTAAGGAAGCACCAAAATA
TTCACATCATTGGCGTGAAGGAGATGTTGTGATATGGGACAACTTGGCAG
TAATGCACAGAACAGGACCTGTCACAAAACAATCCATCATTGGTAAGCGG
ATGATGTATAGAACAACATATTTTATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11500MSTRG.11500Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11500.1.p1.exon1MSTRG.11500.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11500.1.p1MSTRG.11500.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:1075614..1076689 +