MSTRG.11499.1.p1 (mRNA) -

Overview
NameMSTRG.11499.1.p1
Unique NameMSTRG.11499.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:1063658..1064710+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11499.1.p1 ID=MSTRG.11499.1.p1|Name=MSTRG.11499.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1053bp|location=Sequence derived from alignment at sc0000083_pilon:1063658..1064710+ (Clytia hemisphaerica_ch_hm2_pilon)
taagaTTGATCAATTCATCGAAAACTGTTCAAAAACGAAGAAAATACAAG
TCAAATAAAATGTATTCAGAATTGATATTGTTTGCACTGACTGCATTGGT
GATTGCACAATATGACCAACATATGCATTGCTACAGCTTGACCTCCAAGA
ATATTGACTCTAATTCTTGCCCAAATAATGTCAGAATGTAGGACAGATTG
GgtatactttgcaaaatatgaATCTAGTGAACTTGACTGAAAATGATCTC
GTTATAATACGAGAAGAATTGTTGAAGCATGGAGTGATATTATTCCGTAA
TCAAAGTATGACCAGAAAACAACAAATTGATTTCACTGAAAGAATTGGTA
CCCTTATTCCTTTACCAACATTTCTTAATTTGAAAGATCCAGAGATCGGG
TTTGAAAGCAAGATCCTGAGAGTAACAAACTATGATTCAAAAGGTTTGCC
AAAGAAACAAAAGGAATTAAACGGTCAGTACTGGCATAAAGATGGAAATT
ACATGCAAAATGATTACATTGGTAGTATGCTTTATGCTGACGAAATTGAC
GAATTTAATGGAGATTCAAGACCGACTTTATTCTTGGATAATTGTTTGAT
GGATGTATACCCAAAAGCACTTCTTGACCAAGTCAATCATCTTGCTAACG
AAATCAATATCGGTACGATCAAAGATTTCACCGTGACTGAAGATGATATG
AAACAACATCCACCAGTATTTCCAAAAGTGATTTCAAAACATCCACAAAA
TGGCAAAGATTGTTTATATTTGACCGAGTTTTTAACATTGAATGGTAATT
TAACTCAAAAAGAACAAGAAATAATCGAACAGTTGTGGGATATTATTATT
AAAGAAGCACCAAAATATTCACATCATTGGCGTGAAGGAGATGTTGTGAT
ATGGGACAACTTGGCAGTAATGCACAGAACAGGACCTGTCACAAAACAAT
CCATCATTGGTAAGCGGATGATGTATAGAACAACATATTTTATCTAACAA
AACTGTCGAAGAAGATTAGTGAAACTCTCCTGAGCACGAAACGAATTGGT
TTG

Coding sequence (CDS) from alignment at sc0000083_pilon:1063658..1064710+

>MSTRG.11499.1.p1 ID=MSTRG.11499.1.p1|Name=MSTRG.11499.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=780bp|location=Sequence derived from alignment at sc0000083_pilon:1063658..1064710+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaATCTAGTGAACTTGACTGAAAATGATCTCGTTATAATACGAGAAGA
ATTGTTGAAGCATGGAGTGATATTATTCCGTAATCAAAGTATGACCAGAA
AACAACAAATTGATTTCACTGAAAGAATTGGTACCCTTATTCCTTTACCA
ACATTTCTTAATTTGAAAGATCCAGAGATCGGGTTTGAAAGCAAGATCCT
GAGAGTAACAAACTATGATTCAAAAGGTTTGCCAAAGAAACAAAAGGAAT
TAAACGGTCAGTACTGGCATAAAGATGGAAATTACATGCAAAATGATTAC
ATTGGTAGTATGCTTTATGCTGACGAAATTGACGAATTTAATGGAGATTC
AAGACCGACTTTATTCTTGGATAATTGTTTGATGGATGTATACCCAAAAG
CACTTCTTGACCAAGTCAATCATCTTGCTAACGAAATCAATATCGGTACG
ATCAAAGATTTCACCGTGACTGAAGATGATATGAAACAACATCCACCAGT
ATTTCCAAAAGTGATTTCAAAACATCCACAAAATGGCAAAGATTGTTTAT
ATTTGACCGAGTTTTTAACATTGAATGGTAATTTAACTCAAAAAGAACAA
GAAATAATCGAACAGTTGTGGGATATTATTATTAAAGAAGCACCAAAATA
TTCACATCATTGGCGTGAAGGAGATGTTGTGATATGGGACAACTTGGCAG
TAATGCACAGAACAGGACCTGTCACAAAACAATCCATCATTGGTAAGCGG
ATGATGTATAGAACAACATATTTTATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11499MSTRG.11499Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11499.1.p1.exon1MSTRG.11499.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11499.1.p1MSTRG.11499.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:1063658..1064710 +