MSTRG.11497.4.p1 (mRNA) -

Overview
NameMSTRG.11497.4.p1
Unique NameMSTRG.11497.4.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:1041972..1045652-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11497.4.p1 ID=MSTRG.11497.4.p1|Name=MSTRG.11497.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3681bp|location=Sequence derived from alignment at sc0000083_pilon:1041972..1045652- (Clytia hemisphaerica_ch_hm2_pilon)
CTTGAATTGATTGTTTATTGCTCAGAGATATTTTTCATGAATCTAATTTT
TTGACATTTTTGGTCTAATCATATTTACGTTTTAGTGTCATTTGAAGCAA
TTTTTTTCATTTTTGTCGCGATTCATTTTGTTGGTTCGAAAGCTTATAAC
GAAAAAAAATTCTTCTAAAAAGTTGAAATCGAAGAAAAAAATTTTATTTG
GAAAAAGGTAATTGAATAATTCATTTGTTTTCTTTTTTTATATGCTTTTG
TAATTAAAATTCTCTGAAATTGTTACTTTTTAAAATGTTTTTTAAAGTTG
CTCAGCAGTCTGCTGTTGTTGACTCCACCCATTTAAACCTAAGAATTTCA
GAAAAATATATATTCGAGCCAAAGTAAACTATTTATAATCATTTCTAAGC
CATGACACTCTTTCGAAAAGCCTTGAAGATGTGAGAGAAGGAGGTAGAAA
TCCCAGGTTTCTACATAATGACTCTATACCAACCATGACTATTTTTCTTT
TATTCGCAGTTAGCCAATCAGGATGCACGCTTTAACGGAATCAGTATGGG
AAGTCATTGCATGGAGGACCACCACACCTTACGATGCCGTCACCGATCGA
TATTCAAGAGTCTTTATGCCCAAACTCTTCATCGTTTCATCTCTTGTGAT
GGGCTTCAGTTATTTCAACGATAAACTCAATTGCATGGTCAATAGCCGGC
TTGGTGGTTTAAAAGAATTTGTTCAAGAAACTTGTTGGATTCAAGGATTT
TACATTTACCATGAAATGCACACAAAATTGAATGAGTCAGCTTACTATGG
CATTCCTGAATATTCTGGGTATGATGGCATCACAGGAAAAGGTGGGTAGA
ACCACAACCTAGTCCCCATGTCTAATCCCTTTTTTTATTGATGTGGATCT
GAGCCCTGGGTGCCTCTAAGTTCTTGGATTTACTTAAATTGTAAATATTT
ATAACGCCCAGTGGTATCACTGACATCGTATGAACTCGTCCGACTATTAC
CCTAAGAGCGCTGCAACCCATTACCACTCTGTTTTCGACCCGCCCGAATT
AAGAGAAGAGACATAATTTTTTTTATATTTTGGGTGTTTACTTGTATTTT
GAAATAAAAAAATTGTTAAAAATGTTATGGAATCATGGCTGGATTCTCTC
ATGCCTGAGAAGCCTGTCCGGAAGGGCTTCTAAACAATATAATCAAATTT
TACAGGACAACTATGTTCCATGATCAATCGAGCTGGTGGAGCAAACAAGA
TATGTACACCCATGACCAAAAGGTAAAAACTTGCTCATCCAACAGTGGTT
GTGGTTCAGAGAAGATTTAATAATTGCAACTGAAAAATAAAACTACATTT
TCTGATTAAAGTTTTTTTTAAAGTTTAAAGATTACCTACACTTGTAAAAG
CGTGAAAAGCTTAAGGAAAAAAGTCATGCGATACTCTCATCCCAAGCTGC
CCAAGTTGATATACCAACGACCAATATGTTTTTGAGATTTTCCCAGCATT
ATTATCAGGATCACAGCTCAGGATTCTATCAGTTACAAGAAGATCCAATT
CGAAGCTTTATCTATCTAATGTCTAAGCTTAATTATTTTTGTCTTTCAGG
TATTTTTTGCATTACCAATGGTTACCGTTCTACGTTTGCAGTCTGGCTAT
TTTCTACTTCTTCCCATATATGATGTTTAAAGCCGGCAACAGTGATATTA
TCTCACTGGTAGACATTGTAAAGAACGGCTCACTTCGAGATGTTGATAAA
ATCACCAACAATTACTTCAATTACAAAATTTCATCGCGATCCAAAATGAA
AATGCTCATTTGGTTTAACTTTTTTGTCAAGGTTAGTCAATACTTTTATT
GTGTACTCAATCTCATATTTCGAGTTTATAATCACAGCTTGTTGAAGGTG
CAATGGGGGATGAACTAGTAATGAATTTTTCCGATGGGGGGCATGGTCAT
GCCTTACATTGGAAAGGTTGGTCAAACCCCCTGAAATCTTTTTTGTCTAA
TGGTCCTTTTGGAAAACTGCACTGATTTCTCAATTCCTATAATGTCACTG
AGGCTGGGATGTTTTCTTTTATCTTCTTATCTTCCTTGGAAACTTTGACG
TCTATTGTAAGATCATTACATAAAGAGTTGATGAATCCGTTTCCCACCGA
AGTCCCACTGAAATATTTAGCCAAAATTTCTTCCCCGGTGGGGAAATTAC
CCTACAATATCAGCCCCGCTGGGAATTGACTTTGATTTCATCCCCATGTG
TAATTCAAGGGAAAATATTGCTCTCCAAAACCATCCCCGCTAGACTTTTC
GACCTACAATCATATTTTTATCCCCATTGAGATTTCGATAGCAATTTCCA
TCCCAACTATTGGAAAATTCTCACCGGGGATGTGAGAAAAGGGTGTTCTA
ATAATAATTTGAAAGTTTCCTTTTCAATAAGGTTCTGTACATCGTGATCA
ACATATGTGGCTTCAAATTAACTGATTACACCATGGACGGACGGTTTATT
GATTATGGTCTCGATTGGTTAAAATGGAACGATGTGCCAAACCATATCGC
TCATGACATTGTAAAAACTGGTGTTCCAAAGCCTGGTGATTATTTTCTCC
CATCTGTTGGAATGTGTGAAGTTCACGAGGCGCTGAATGACAAACGTGGT
ATTTACATTGATAAGTGAGTATTATTCTTATCTTCGACTTAAAGCAAGAA
AAAGCGAGATTTTAATATCTCCGATTTATTAAAAATGGCGGATTGAATCT
AGCACTTTCTTTGGTTTAACTTGGTCATTCGAAGTCAAAATCCAACTAAA
TGCATCATTTACACCCTTATCGCAACCGTATTATTTGCTTTCATTTTTTA
GGCACAAAGTGGTCTGTGAGATCAGCCAAAACATTCGATATCAATACATC
TTTATTATTCTCTGGTTTTTCTTCGCTGTTGGTGTTTGCATATCAGCTCT
TGGTCTTCTTCATTTTCTTTACTTGACGGCTAAATCCTTCTTCTGGGTCT
ACTCACCAAAGATCTTCGAAACTCAACTATCTAATAAAGTTCATGCACAA
TTAACATTACGTGAAATGGAATATTTAGAGAAAATACAGCGCTTGGATAT
TACAATGTATGGTGAAATCTTAAGAGAACTAACTCGCTATAAACCTGGTA
TTCAAGCTATCAAGAAATTCGACGATTCTAAAACATCTGATATGATCACA
TTGTTACCACTGGCTCCGGTTAGTGAGAATCGGATTCTTGCAGGCGTTTG
ATTTACTGACACAGGGGAATGTTCCCGGAATGTTTTTAGATATAATTGAA
TGGAAGAGATTATCTTGAAAAGTACATTCTTCCAGTATGGCCTTGAAGAA
GCAGGCAGTTTTGGCAAAACCACATCGGAAATTCCAACTTTAAAGTAATT
TCTTCCAAGTATATAAAATTGGTTTCGTAGACCTGCAGCATGCCACCTGT
TTTAGATTAAGTCTTCATTAAAAGTTTCCAGCATGAAATAAAGGGGAAAT
AAATCCTTGAAATATGAACGCCTTTCAGATTTTCGAGATTTTAACTGTGG
TGCCTTTTAGAGGAAATACTTTTTTGCTTTTTTACTGCACCAAGGCGTAC
TCTTAGGTTCCAAATAAACGGCCCCCCCCCGCTTGTTAATTTTTCGAAAA
TTTTCCAACCCCCCCGGACCTTATTAGGACC

Coding sequence (CDS) from alignment at sc0000083_pilon:1041972..1045652-

>MSTRG.11497.4.p1 ID=MSTRG.11497.4.p1|Name=MSTRG.11497.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6255bp|location=Sequence derived from alignment at sc0000083_pilon:1041972..1045652- (Clytia hemisphaerica_ch_hm2_pilon)
GCACAAAGTGGTCTGTGAGATCAGCCAAAACATTCGATATCAATACATCT
TTATTATTCTCTGGTTTTTCTTCGCTGTTGGTGTTTGCATATCAGCTCTT
GGTCTTCTTCATTTTCTTTACTTGACGGCTAAATCCTTCTTCTGGGTCTA
CTCACCAAAGATCTTCGAAACTCAACTATCTAATAAAGTTCATGCACAAT
TAACATTACGTGAAATGGAATATTTAGAGAAAATACAGCGCTTGGATATT
ACAATGTATGGTGAAATCTTAAGAGAACTAACTCGCTATAAACCTGGTAT
TCAAGCTATCAAGAAATTCGACGATTCTAAAACATCTGATATGATCACAT
TGTTACCACTGGCTCCGGTTAGTGAGAATCGGATTCTTGCAGGCGTTTGA
GTTCTGTACATCGTGATCAACATATGTGGCTTCAAATTAACTGATTACAC
CATGGACGGACGGTTTATTGATTATGGTCTCGATTGGTTAAAATGGAACG
ATGTGCCAAACCATATCGCTCATGACATTGTAAAAACTGGTGTTCCAAAG
CCTGGTGATTATTTTCTCCCATCTGTTGGAATGTGTGAAGTTCACGAGGC
GCTGAATGACAAACGTGGTATTTACATTGATAAGTATTTTTTGCATTACC
AATGGTTACCGTTCTACGTTTGCAGTCTGGCTATTTTCTACTTCTTCCCA
TATATGATGTTTAAAGCCGGCAACAGTGATATTATCTCACTGGTAGACAT
TGTAAAGAACGGCTCACTTCGAGATGTTGATAAAATCACCAACAATTACT
TCAATTACAAAATTTCATCGCGATCCAAAATGAAAATGCTCATTTGGTTT
AACTTTTTTGTCAAGGACAACTATGTTCCATGATCAATCGAGCTGGTGGA
GCAAACAAGATATGTACACCCATGACCAAAAGATGCACGCTTTAACGGAA
TCAGTATGGGAAGTCATTGCATGGAGGACCACCACACCTTACGATGCCGT
CACCGATCGATATTCAAGAGTCTTTATGCCCAAACTCTTCATCGTTTCAT
CTCTTGTGATGGGCTTCAGTTATTTCAACGATAAACTCAATTGCATGGTC
AATAGCCGGCTTGGTGGTTTAAAAGAATTTGTTCAAGAAACTTGTTGGAT
TCAAGGATTTTACATTTACCATGAAATGCACACAAAATTGAATGAGTCAG
CTTACTATGGCATTCCTGAATATTCTGGGTATGATGGCATCACAGGAAAA
GGCACAAAGTGGTCTGTGAGATCAGCCAAAACATTCGATATCAATACATC
TTTATTATTCTCTGGTTTTTCTTCGCTGTTGGTGTTTGCATATCAGCTCT
TGGTCTTCTTCATTTTCTTTACTTGACGGCTAAATCCTTCTTCTGGGTCT
ACTCACCAAAGATCTTCGAAACTCAACTATCTAATAAAGTTCATGCACAA
TTAACATTACGTGAAATGGAATATTTAGAGAAAATACAGCGCTTGGATAT
TACAATGTATGGTGAAATCTTAAGAGAACTAACTCGCTATAAACCTGGTA
TTCAAGCTATCAAGAAATTCGACGATTCTAAAACATCTGATATGATCACA
TTGTTACCACTGGCTCCGGTTAGTGAGAATCGGATTCTTGCAGGCGTTTG
AGTTCTGTACATCGTGATCAACATATGTGGCTTCAAATTAACTGATTACA
CCATGGACGGACGGTTTATTGATTATGGTCTCGATTGGTTAAAATGGAAC
GATGTGCCAAACCATATCGCTCATGACATTGTAAAAACTGGTGTTCCAAA
GCCTGGTGATTATTTTCTCCCATCTGTTGGAATGTGTGAAGTTCACGAGG
CGCTGAATGACAAACGTGGTATTTACATTGATAAGTATTTTTTGCATTAC
CAATGGTTACCGTTCTACGTTTGCAGTCTGGCTATTTTCTACTTCTTCCC
ATATATGATGTTTAAAGCCGGCAACAGTGATATTATCTCACTGGTAGACA
TTGTAAAGAACGGCTCACTTCGAGATGTTGATAAAATCACCAACAATTAC
TTCAATTACAAAATTTCATCGCGATCCAAAATGAAAATGCTCATTTGGTT
TAACTTTTTTGTCAAGGACAACTATGTTCCATGATCAATCGAGCTGGTGG
AGCAAACAAGATATGTACACCCATGACCAAAAGATGCACGCTTTAACGGA
ATCAGTATGGGAAGTCATTGCATGGAGGACCACCACACCTTACGATGCCG
TCACCGATCGATATTCAAGAGTCTTTATGCCCAAACTCTTCATCGTTTCA
TCTCTTGTGATGGGCTTCAGTTATTTCAACGATAAACTCAATTGCATGGT
CAATAGCCGGCTTGGTGGTTTAAAAGAATTTGTTCAAGAAACTTGTTGGA
TTCAAGGATTTTACATTTACCATGAAATGCACACAAAATTGAATGAGTCA
GCTTACTATGGCATTCCTGAATATTCTGGGTATGATGGCATCACAGGAAA
AGGCACAAAGTGGTCTGTGAGATCAGCCAAAACATTCGATATCAATACAT
CTTTATTATTCTCTGGTTTTTCTTCGCTGTTGGTGTTTGCATATCAGCTC
TTGGTCTTCTTCATTTTCTTTACTTGACGGCTAAATCCTTCTTCTGGGTC
TACTCACCAAAGATCTTCGAAACTCAACTATCTAATAAAGTTCATGCACA
ATTAACATTACGTGAAATGGAATATTTAGAGAAAATACAGCGCTTGGATA
TTACAATGTATGGTGAAATCTTAAGAGAACTAACTCGCTATAAACCTGGT
ATTCAAGCTATCAAGAAATTCGACGATTCTAAAACATCTGATATGATCAC
ATTGTTACCACTGGCTCCGGTTAGTGAGAATCGGATTCTTGCAGGCGTTT
GAGTTCTGTACATCGTGATCAACATATGTGGCTTCAAATTAACTGATTAC
ACCATGGACGGACGGTTTATTGATTATGGTCTCGATTGGTTAAAATGGAA
CGATGTGCCAAACCATATCGCTCATGACATTGTAAAAACTGGTGTTCCAA
AGCCTGGTGATTATTTTCTCCCATCTGTTGGAATGTGTGAAGTTCACGAG
GCGCTGAATGACAAACGTGGTATTTACATTGATAAGTATTTTTTGCATTA
CCAATGGTTACCGTTCTACGTTTGCAGTCTGGCTATTTTCTACTTCTTCC
CATATATGATGTTTAAAGCCGGCAACAGTGATATTATCTCACTGGTAGAC
ATTGTAAAGAACGGCTCACTTCGAGATGTTGATAAAATCACCAACAATTA
CTTCAATTACAAAATTTCATCGCGATCCAAAATGAAAATGCTCATTTGGT
TTAACTTTTTTGTCAAGGACAACTATGTTCCATGATCAATCGAGCTGGTG
GAGCAAACAAGATATGTACACCCATGACCAAAAGATGCACGCTTTAACGG
AATCAGTATGGGAAGTCATTGCATGGAGGACCACCACACCTTACGATGCC
GTCACCGATCGATATTCAAGAGTCTTTATGCCCAAACTCTTCATCGTTTC
ATCTCTTGTGATGGGCTTCAGTTATTTCAACGATAAACTCAATTGCATGG
TCAATAGCCGGCTTGGTGGTTTAAAAGAATTTGTTCAAGAAACTTGTTGG
ATTCAAGGATTTTACATTTACCATGAAATGCACACAAAATTGAATGAGTC
AGCTTACTATGGCATTCCTGAATATTCTGGGTATGATGGCATCACAGGAA
AAGGCACAAAGTGGTCTGTGAGATCAGCCAAAACATTCGATATCAATACA
TCTTTATTATTCTCTGGTTTTTCTTCGCTGTTGGTGTTTGCATATCAGCT
CTTGGTCTTCTTCATTTTCTTTACTTGACGGCTAAATCCTTCTTCTGGGT
CTACTCACCAAAGATCTTCGAAACTCAACTATCTAATAAAGTTCATGCAC
AATTAACATTACGTGAAATGGAATATTTAGAGAAAATACAGCGCTTGGAT
ATTACAATGTATGGTGAAATCTTAAGAGAACTAACTCGCTATAAACCTGG
TATTCAAGCTATCAAGAAATTCGACGATTCTAAAACATCTGATATGATCA
CATTGTTACCACTGGCTCCGGTTAGTGAGAATCGGATTCTTGCAGGCGTT
TGAGTTCTGTACATCGTGATCAACATATGTGGCTTCAAATTAACTGATTA
CACCATGGACGGACGGTTTATTGATTATGGTCTCGATTGGTTAAAATGGA
ACGATGTGCCAAACCATATCGCTCATGACATTGTAAAAACTGGTGTTCCA
AAGCCTGGTGATTATTTTCTCCCATCTGTTGGAATGTGTGAAGTTCACGA
GGCGCTGAATGACAAACGTGGTATTTACATTGATAAGTATTTTTTGCATT
ACCAATGGTTACCGTTCTACGTTTGCAGTCTGGCTATTTTCTACTTCTTC
CCATATATGATGTTTAAAGCCGGCAACAGTGATATTATCTCACTGGTAGA
CATTGTAAAGAACGGCTCACTTCGAGATGTTGATAAAATCACCAACAATT
ACTTCAATTACAAAATTTCATCGCGATCCAAAATGAAAATGCTCATTTGG
TTTAACTTTTTTGTCAAGGACAACTATGTTCCATGATCAATCGAGCTGGT
GGAGCAAACAAGATATGTACACCCATGACCAAAAGATGCACGCTTTAACG
GAATCAGTATGGGAAGTCATTGCATGGAGGACCACCACACCTTACGATGC
CGTCACCGATCGATATTCAAGAGTCTTTATGCCCAAACTCTTCATCGTTT
CATCTCTTGTGATGGGCTTCAGTTATTTCAACGATAAACTCAATTGCATG
GTCAATAGCCGGCTTGGTGGTTTAAAAGAATTTGTTCAAGAAACTTGTTG
GATTCAAGGATTTTACATTTACCATGAAATGCACACAAAATTGAATGAGT
CAGCTTACTATGGCATTCCTGAATATTCTGGGTATGATGGCATCACAGGA
AAAGGCACAAAGTGGTCTGTGAGATCAGCCAAAACATTCGATATCAATAC
ATCTTTATTATTCTCTGGTTTTTCTTCGCTGTTGGTGTTTGCATATCAGC
TCTTGGTCTTCTTCATTTTCTTTACTTGACGGCTAAATCCTTCTTCTGGG
TCTACTCACCAAAGATCTTCGAAACTCAACTATCTAATAAAGTTCATGCA
CAATTAACATTACGTGAAATGGAATATTTAGAGAAAATACAGCGCTTGGA
TATTACAATGTATGGTGAAATCTTAAGAGAACTAACTCGCTATAAACCTG
GTATTCAAGCTATCAAGAAATTCGACGATTCTAAAACATCTGATATGATC
ACATTGTTACCACTGGCTCCGGTTAGTGAGAATCGGATTCTTGCAGGCGT
TTGAGTTCTGTACATCGTGATCAACATATGTGGCTTCAAATTAACTGATT
ACACCATGGACGGACGGTTTATTGATTATGGTCTCGATTGGTTAAAATGG
AACGATGTGCCAAACCATATCGCTCATGACATTGTAAAAACTGGTGTTCC
AAAGCCTGGTGATTATTTTCTCCCATCTGTTGGAATGTGTGAAGTTCACG
AGGCGCTGAATGACAAACGTGGTATTTACATTGATAAGTATTTTTTGCAT
TACCAATGGTTACCGTTCTACGTTTGCAGTCTGGCTATTTTCTACTTCTT
CCCATATATGATGTTTAAAGCCGGCAACAGTGATATTATCTCACTGGTAG
ACATTGTAAAGAACGGCTCACTTCGAGATGTTGATAAAATCACCAACAAT
TACTTCAATTACAAAATTTCATCGCGATCCAAAATGAAAATGCTCATTTG
GTTTAACTTTTTTGTCAAGGACAACTATGTTCCATGATCAATCGAGCTGG
TGGAGCAAACAAGATATGTACACCCATGACCAAAAGATGCACGCTTTAAC
GGAATCAGTATGGGAAGTCATTGCATGGAGGACCACCACACCTTACGATG
CCGTCACCGATCGATATTCAAGAGTCTTTATGCCCAAACTCTTCATCGTT
TCATCTCTTGTGATGGGCTTCAGTTATTTCAACGATAAACTCAATTGCAT
GGTCAATAGCCGGCTTGGTGGTTTAAAAGAATTTGTTCAAGAAACTTGTT
GGATTCAAGGATTTTACATTTACCATGAAATGCACACAAAATTGAATGAG
TCAGCTTACTATGGCATTCCTGAATATTCTGGGTATGATGGCATCACAGG
AAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11497MSTRG.11497Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11497.4.p1MSTRG.11497.4.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11497.4.p1.exon6MSTRG.11497.4.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11497.4.p1.exon5MSTRG.11497.4.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11497.4.p1.exon4MSTRG.11497.4.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11497.4.p1.exon3MSTRG.11497.4.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11497.4.p1.exon2MSTRG.11497.4.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11497.4.p1.exon1MSTRG.11497.4.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:1041972..1045652 -