MSTRG.11452.1.p1 (mRNA) -

Overview
NameMSTRG.11452.1.p1
Unique NameMSTRG.11452.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:285774..288135+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11452.1.p1 ID=MSTRG.11452.1.p1|Name=MSTRG.11452.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2362bp|location=Sequence derived from alignment at sc0000083_pilon:285774..288135+ (Clytia hemisphaerica_ch_hm2_pilon)
agaaaaactcaTGATAACAGAATGACtgagaaaaacaataacaaatctCT GAAacgaaatctgattggtttaacaTGTGGTGGTAGTGCAGGGTTATTTT ACGCCCTCGGAAACGCCCTTATTCAATATATATACCGCCAAAACCCACAC GTGGACTTGTCTGAAGACCAGGTGATTTTTGTTCGATCTGTTATTCAATT TGTGATGATTGGTGCTATTCTTCTTTGGAAACAAATGAGTCCTTGGACAG GATCATGGAAAATGTTTGGACGGTTATGGTTTATGGGCATGACTAAAGTA ATAAGTTTAACCTTCTTTTACCGTGCTTTGAGAGTATTACCTTTAGGAGA TGCGACTGTGATTTTATTTACTAATCCAGTTTTTACACTCTTTTTGggaa ttatttttctaaatgaaGCACGTAGCGCCTTCAATATCATTTTTGGTTTA GTGAGTTTTCTCGGGGTGGCAATAATTGCAGAccctaaattatttttctc tgaaCAAACCTTACTAAACGGACCAAGTAATACAACTATGACTTCAATCA ATGCAACATCTCCAGTCTTGAATGGGACTAATATCGAAGAAGCTGCACCC TACAGCCATATTGTCGCTGTTGGGTTTGGTCTCATGGGTGCAATCATGTT AAGTTTATATATGGTGATATTAAAATATAATACAAGTGATAAAGTCGATT TTAGAGTTGCCCTGTTTTACCCAAGTATGTGCGGACTCTGGTTACCGCCT ATTGTTCAGGCGGTCGAGCAGCGCCCCTTTGAATGGAACCAACTAACATA TGACTTTTGGCTTATAATGCTTGCAGGCGCCGTATCATATTTTATCGCCA TGTTCCTAATGGCGTACGCCCTGTATATGGCGGAAGCAGGTCCAGCCGCC TTAGTTCGTAATGCGGAAGTGATTTTCGCTCTTATCTTTGAAGTTGTAAT AATGCAGCAGATTCCGATGTTGTTCAGCATTGCGGGCGTGGTTTTGATTT TATGGTGCACCTCTATGATTGTCTTTAATCGGATCTTCAGTTTGGAgcaa aaaatctgtcaaaaatgcTGTAAAAGAAACACAATTGATGACACATTGAC AGTCAGCATTATTGAAAGCGAAATTGAAAATACTGGAAAAGAGGCTAATG AAGACACTAGCCTGAATCCAACAGATGGAAAGAACATAACATATACAAGA TTTTAGTAGTTTTTTAGATGTTTTAGATCAATAATATGTTGAATAGCTTT CAAGTTTGTAcacaaattctgaaaaataaagaaaggtGGGTTCTACATAG AAATTTTTTATGTCACTTAAACACGATAGTATCATATCCATttagtttaa agcccgaagagtTAGAgtagaattttttgtttttgaggactgcatattta tttttctattttaagttCTTATATTAGTTAGTCAAAACCCAATTATTTTA TTGACAgataagataaaaaatgacaacaaaagtaatttcatttcatttct gatttctttctctttctctttattatcttttcaaaatatctttttatcca atttttgaaaagacatTGCTTTGGCATTGTCACATCTTGGATGCATAAAA TCTTATTCTttgctaaatatttttcgtaTAAAATACAAAGCTTGTATCGT TTCCCGAAGAGAAAATATCAATCAATTCTATCTGTAATCACAGACTAGTA ATCTCGTCTCTTTTTTCTTCTCTCAACCTCGATTCGGAGCATTTCCCCGA CGTGAATTtgctttctatttttttgtattttcttcatttatggtaattat gggtaatcaggagGTCTCAGTACGATTAGTGGAAAAAACATCAACATTGT ctgatgatgggagaagaatctctcgaaacgtagtcAAAcataaatctcgt gatccaagccacgataaacttccaatatggaTACTTAACATTAATTACCA TACTTTATCTTTCCCTGATTAGAAATgccgaaagcatccaccgaaggggg acttcaaaatatctgttctgaaggcacgttccagctggatatggcggtct gttcttagcgaactaaagaaaaaagtgcagctggaaaaaagtggcctgtt ctactgaagattgggaccagctggaaaaaatgatctgttcttatgaaaaa atagtttgatatcaaaaaaataagatgTCTAAGATTTTCCTAtttgttct gagggaatttaaaaaaagtccaaaagtctttgagatctgttcttttcctt ctgaatgtagttgcctggagtggcagctaaaaattctccatctttgtaga acatctggaaattaagtttctgttcttaaaagcccttcaatgtcgagctg gaatttagcgat

Coding sequence (CDS) from alignment at sc0000083_pilon:285774..288135+

>MSTRG.11452.1.p1 ID=MSTRG.11452.1.p1|Name=MSTRG.11452.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1206bp|location=Sequence derived from alignment at sc0000083_pilon:285774..288135+ (Clytia hemisphaerica_ch_hm2_pilon)
agaaaaactcaTGATAACAGAATGACtgagaaaaacaataacaaatctCT
GAAacgaaatctgattggtttaacaTGTGGTGGTAGTGCAGGGTTATTTT
ACGCCCTCGGAAACGCCCTTATTCAATATATATACCGCCAAAACCCACAC
GTGGACTTGTCTGAAGACCAGGTGATTTTTGTTCGATCTGTTATTCAATT
TGTGATGATTGGTGCTATTCTTCTTTGGAAACAAATGAGTCCTTGGACAG
GATCATGGAAAATGTTTGGACGGTTATGGTTTATGGGCATGACTAAAGTA
ATAAGTTTAACCTTCTTTTACCGTGCTTTGAGAGTATTACCTTTAGGAGA
TGCGACTGTGATTTTATTTACTAATCCAGTTTTTACACTCTTTTTGggaa
ttatttttctaaatgaaGCACGTAGCGCCTTCAATATCATTTTTGGTTTA
GTGAGTTTTCTCGGGGTGGCAATAATTGCAGAccctaaattatttttctc
tgaaCAAACCTTACTAAACGGACCAAGTAATACAACTATGACTTCAATCA
ATGCAACATCTCCAGTCTTGAATGGGACTAATATCGAAGAAGCTGCACCC
TACAGCCATATTGTCGCTGTTGGGTTTGGTCTCATGGGTGCAATCATGTT
AAGTTTATATATGGTGATATTAAAATATAATACAAGTGATAAAGTCGATT
TTAGAGTTGCCCTGTTTTACCCAAGTATGTGCGGACTCTGGTTACCGCCT
ATTGTTCAGGCGGTCGAGCAGCGCCCCTTTGAATGGAACCAACTAACATA
TGACTTTTGGCTTATAATGCTTGCAGGCGCCGTATCATATTTTATCGCCA
TGTTCCTAATGGCGTACGCCCTGTATATGGCGGAAGCAGGTCCAGCCGCC
TTAGTTCGTAATGCGGAAGTGATTTTCGCTCTTATCTTTGAAGTTGTAAT
AATGCAGCAGATTCCGATGTTGTTCAGCATTGCGGGCGTGGTTTTGATTT
TATGGTGCACCTCTATGATTGTCTTTAATCGGATCTTCAGTTTGGAgcaa
aaaatctgtcaaaaatgcTGTAAAAGAAACACAATTGATGACACATTGAC
AGTCAGCATTATTGAAAGCGAAATTGAAAATACTGGAAAAGAGGCTAATG
AAGACACTAGCCTGAATCCAACAGATGGAAAGAACATAACATATACAAGA
TTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11452MSTRG.11452Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11452.1.p1.exon1MSTRG.11452.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11452.1.p1MSTRG.11452.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:285774..288135 +