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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:46590..49686+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11436.1.p1 ID=MSTRG.11436.1.p1|Name=MSTRG.11436.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3097bp|location=Sequence derived from alignment at sc0000083_pilon:46590..49686+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTTTATTCTGATTGTCAGtgaaaacaaattaagaattgaaaatgaaata
aaatgtcaTCTACTTTTGGATCCAAATCCATTGGTGAAAAAGACTGGAAA
GCACACGGCCACAATGTTGCAACAAATTCTAATACTGTGACAGCAAAATC
AAGGTGCTCATTgtcattatttcttttttttgaattctcaaTTACTCTGA
ACAACCAGTTTTCTTGAAGAACTAGAGTTGAAGAACTAGAGAATTTTAAA
AAGGTCCTATACTGGTGTCACTTTTTACATAGCTAATAACTACCCCAAGG
GAACTTGCACgattttaattaaattaaattttaatttaattttagtaaga
gctttttcagctagtaatgtaaagtaatAGTGTTGTAAGCTAGTTATTAT
GTAAATTTTGGGAAGAACTATTTTTGGTGTGGTAtcatctttaattttaa
ttttgtgcAAATATGGTTTGGGTCCAAATTAGTTTCCTTAATAAGGTAGA
AGTGGGTCAAAATGGGAATTACAAAACGCAATAACTATTTTTCACACTAA
AAATAAGAAGTAAGCTATTCAAACAAATACAAATATAATTTCAATCAAac
agtaaaaattttgaatttctcatTTTCCTTCAGGCCACCTGGACCTGATT
GGACATCAAGTTTGAGGTGTATCAAACAAGACAATGTGATTTATCCAAAT
GATGAACCTGTTCTTCGCCAGGGGATGAGACCATTCCTTCGTGAGTATCC
CAAATACTCTCTTCTTTGTTTCATTTGTCCTTAATCCCTGTCAAGTTTTT
CTTACTATTCCTCATCTTATTTGTGTTCATTCACAAAAAATCAGGCgtaa
aacttttcaatttcaaaattagcAGATGttaagttgaaatattttatgac
cCTGTCACTTAAAATGAGCCCTTAAGTTACACTTTCAACACGTCAGAATT
TTTCAATTAACTAACCACCGTGGGAAACCATCCATTATCATAGCTAATAA
AACTGAACTTGATGAATTTGCCAAGGGTCATTGACCTTATAGTATTTCCT
CAATCATTGTATTAGATAAGAATGAACAAAGTCTGGAAGAATGGGCTTAT
TACAGAGACGGATCAAGAAATGGCAAACGTTGTATCATCAATGGTAAACG
CCAAGGGAACGTCCAATCGATCAATGAGATAAGCGTCGAAAGCACCATTG
GGAATAGATCAAAAGGTACGTTTTGATTAGATAGTGTGTTTAGGGGTTTC
TGCCCCTAACTTccttccttttcaaaaaatgcttcGACCcctaaaaaatg
ttttggtgcCTTCTTAAACCTTTAATCTAGCATAAATTATTCCCTAACTA
ACCATTGAAATGGACTTATCAAATCTTAAAACGGTTGAAAGTGCATGCAT
TTTTTATAATCAAAAGAACACAAAAACACGACAAAATCGAAGGATTTTAA
TCACagtaattaaaattttcatatgaTTTACAAATCCATCAAGGTACGCA
TTATTATTTTATGATAgttgttcttaatttcttcCTTTTCGTACTCGGTA
ATCTAGTTCCTGACCCTCGTGGCGGAGTCGATAGCCTTACAGCAGGAGAC
AAAAGTTATGCAGTGCCTGAATTTTCGAAAGGATTCCATAAAGAAGGTTC
AACGCTACCCGCTGTTAATTTTAGGTAGAGTCCGGTCAATTCACTTAATT
TTTATATTCAGTTGatttttttagtttcttcgTCGTACTTGAAGCTCGTG
CCCTTCTTATCTGGCACtcaatgtagaaattttctgAAGGTTGGGGTGAT
TTTCAGCATCTGGAAGGTTTATATTACGGATTTCGCCTGACCGTATCGAA
AGATTTTGCAGCGAGAGGCCTGAATCTCAGCTCTTGTTTTAGGGAATTGG
CGagtccaaccaaaatattttcacaagGAATCCACAAGGGCCGTTGAGCT
TGACTGGGACTTAGCACATCataggccgactatcattcctctccgatggg
aattTTTCCCGCCCCTTTAGACCTTTAGACTAGGCAGCCGCCAATCCGCC
TTCGGAATTATCAGATAAGCATATTCGGCGCCCATTAAACTTTTctagcc
aatgaaaaaaatgaacttcatCAAAATGATTATCTTACAAAACTATTGCC
AACGCCGCATGATTGTTTGAGGACCTGGAGACAGGTTccgtttcattttc
ttctttttcaatttttcacagcCGGTCCAATAAAATCGTGACAGATACTT
TCATTCCTCTGCAACCACTTCCACAACATAAAAGGTTTGGAAACTCTCGT
TTTGTTACGTTAGCATGTTCTCTGCCGAGcctttttcagaaatcgaaatT
TCGACATCTTAGAATTTtatcgaaagtttgactttcagaggcTCCTGTGG
CCTGAGTGACCTTCaaatatataccaatcgacgtagatttttacaaaaat
gcaataaaaaaaccAAGCAATAGGttctatatcaaaagttatggctctTT
AACGTACTACCGGTATTTTGACCCATCTACCACGAGAATACTCGTAGCTT
GTAGCGAACGTgttaaatttagattttttttatttagttaCGTACCTTCC
ACCTGCTTCCAccattataaaagaaaatattcGATTTGCATCAGCTATCT
TCTCTgcaaattcgaacgttttattCTCTTTTGCAAAACTTGAAAACGTT
TTAGTCAGTGGATATAACTTTTGTatgcatttttttcattcaaagcaTAT
CTTACAAGGAGAAAGAGGTGGTCCGTAAAAAGAATCACGAAGTTTTGGAA
GTGGAAGGGCTTGACAAATGGGATCCAGCGCCGGCTTTAACACCCGGAGt
tttcaaacattgaatttAGATTTAACCTTAGGGCTCAATATACTGATGTA
TTTATATGGTATTTTTAGATTGTAAATAAGTGTGTAAAATTGTGAATAGC
CAAGTCTCAAAACCTTATCTTTATCTCTTGTAACCAAGAGTCGTTAATAA
Ccctatgtatttattttttatagaaactaaattgtaaatttgatcatgtt
attatattttattctatttatCCTAAATTTACATCTGGATACTTTCG Coding sequence (CDS) from alignment at sc0000083_pilon:46590..49686+ >MSTRG.11436.1.p1 ID=MSTRG.11436.1.p1|Name=MSTRG.11436.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000083_pilon:46590..49686+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcaTCTACTTTTGGATCCAAATCCATTGGTGAAAAAGACTGGAAAGC
ACACGGCCACAATGTTGCAACAAATTCTAATACTGTGACAGCAAAATCAA
GGCCACCTGGACCTGATTGGACATCAAGTTTGAGGTGTATCAAACAAGAC
AATGTGATTTATCCAAATGATGAACCTGTTCTTCGCCAGGGGATGAGACC
ATTCCTTCATAAGAATGAACAAAGTCTGGAAGAATGGGCTTATTACAGAG
ACGGATCAAGAAATGGCAAACGTTGTATCATCAATGGTAAACGCCAAGGG
AACGTCCAATCGATCAATGAGATAAGCGTCGAAAGCACCATTGGGAATAG
ATCAAAAGTTCCTGACCCTCGTGGCGGAGTCGATAGCCTTACAGCAGGAG
ACAAAAGTTATGCAGTGCCTGAATTTTCGAAAGGATTCCATAAAGAAGGT
TCAACGCTACCCGCTGTTAATTTTAGcCGGTCCAATAAAATCGTGACAGA
TACTTTCATTCCTCTGCAACCACTTCCACAACATAAAAGcaTATCTTACA
AGGAGAAAGAGGTGGTCCGTAAAAAGAATCACGAAGTTTTGGAAGTGGAA
GGGCTTGACAAATGGGATCCAGCGCCGGCTTTAACACCCGGAGttttcaa
acattgaatgtcaTCTACTTTTGGATCCAAATCCATTGGTGAAAAAGACT
GGAAAGCACACGGCCACAATGTTGCAACAAATTCTAATACTGTGACAGCA
AAATCAAGGCCACCTGGACCTGATTGGACATCAAGTTTGAGGTGTATCAA
ACAAGACAATGTGATTTATCCAAATGATGAACCTGTTCTTCGCCAGGGGA
TGAGACCATTCCTTCATAAGAATGAACAAAGTCTGGAAGAATGGGCTTAT
TACAGAGACGGATCAAGAAATGGCAAACGTTGTATCATCAATGGTAAACG
CCAAGGGAACGTCCAATCGATCAATGAGATAAGCGTCGAAAGCACCATTG
GGAATAGATCAAAAGTTCCTGACCCTCGTGGCGGAGTCGATAGCCTTACA
GCAGGAGACAAAAGTTATGCAGTGCCTGAATTTTCGAAAGGATTCCATAA
AGAAGGTTCAACGCTACCCGCTGTTAATTTTAGcCGGTCCAATAAAATCG
TGACAGATACTTTCATTCCTCTGCAACCACTTCCACAACATAAAAGcaTA
TCTTACAAGGAGAAAGAGGTGGTCCGTAAAAAGAATCACGAAGTTTTGGA
AGTGGAAGGGCTTGACAAATGGGATCCAGCGCCGGCTTTAACACCCGGAG
ttttcaaacattgaatgtcaTCTACTTTTGGATCCAAATCCATTGGTGAA
AAAGACTGGAAAGCACACGGCCACAATGTTGCAACAAATTCTAATACTGT
GACAGCAAAATCAAGGCCACCTGGACCTGATTGGACATCAAGTTTGAGGT
GTATCAAACAAGACAATGTGATTTATCCAAATGATGAACCTGTTCTTCGC
CAGGGGATGAGACCATTCCTTCATAAGAATGAACAAAGTCTGGAAGAATG
GGCTTATTACAGAGACGGATCAAGAAATGGCAAACGTTGTATCATCAATG
GTAAACGCCAAGGGAACGTCCAATCGATCAATGAGATAAGCGTCGAAAGC
ACCATTGGGAATAGATCAAAAGTTCCTGACCCTCGTGGCGGAGTCGATAG
CCTTACAGCAGGAGACAAAAGTTATGCAGTGCCTGAATTTTCGAAAGGAT
TCCATAAAGAAGGTTCAACGCTACCCGCTGTTAATTTTAGcCGGTCCAAT
AAAATCGTGACAGATACTTTCATTCCTCTGCAACCACTTCCACAACATAA
AAGcaTATCTTACAAGGAGAAAGAGGTGGTCCGTAAAAAGAATCACGAAG
TTTTGGAAGTGGAAGGGCTTGACAAATGGGATCCAGCGCCGGCTTTAACA
CCCGGAGttttcaaacattgaatgtcaTCTACTTTTGGATCCAAATCCAT
TGGTGAAAAAGACTGGAAAGCACACGGCCACAATGTTGCAACAAATTCTA
ATACTGTGACAGCAAAATCAAGGCCACCTGGACCTGATTGGACATCAAGT
TTGAGGTGTATCAAACAAGACAATGTGATTTATCCAAATGATGAACCTGT
TCTTCGCCAGGGGATGAGACCATTCCTTCATAAGAATGAACAAAGTCTGG
AAGAATGGGCTTATTACAGAGACGGATCAAGAAATGGCAAACGTTGTATC
ATCAATGGTAAACGCCAAGGGAACGTCCAATCGATCAATGAGATAAGCGT
CGAAAGCACCATTGGGAATAGATCAAAAGTTCCTGACCCTCGTGGCGGAG
TCGATAGCCTTACAGCAGGAGACAAAAGTTATGCAGTGCCTGAATTTTCG
AAAGGATTCCATAAAGAAGGTTCAACGCTACCCGCTGTTAATTTTAGcCG
GTCCAATAAAATCGTGACAGATACTTTCATTCCTCTGCAACCACTTCCAC
AACATAAAAGcaTATCTTACAAGGAGAAAGAGGTGGTCCGTAAAAAGAAT
CACGAAGTTTTGGAAGTGGAAGGGCTTGACAAATGGGATCCAGCGCCGGC
TTTAACACCCGGAGttttcaaacattgaatgtcaTCTACTTTTGGATCCA
AATCCATTGGTGAAAAAGACTGGAAAGCACACGGCCACAATGTTGCAACA
AATTCTAATACTGTGACAGCAAAATCAAGGCCACCTGGACCTGATTGGAC
ATCAAGTTTGAGGTGTATCAAACAAGACAATGTGATTTATCCAAATGATG
AACCTGTTCTTCGCCAGGGGATGAGACCATTCCTTCATAAGAATGAACAA
AGTCTGGAAGAATGGGCTTATTACAGAGACGGATCAAGAAATGGCAAACG
TTGTATCATCAATGGTAAACGCCAAGGGAACGTCCAATCGATCAATGAGA
TAAGCGTCGAAAGCACCATTGGGAATAGATCAAAAGTTCCTGACCCTCGT
GGCGGAGTCGATAGCCTTACAGCAGGAGACAAAAGTTATGCAGTGCCTGA
ATTTTCGAAAGGATTCCATAAAGAAGGTTCAACGCTACCCGCTGTTAATT
TTAGcCGGTCCAATAAAATCGTGACAGATACTTTCATTCCTCTGCAACCA
CTTCCACAACATAAAAGcaTATCTTACAAGGAGAAAGAGGTGGTCCGTAA
AAAGAATCACGAAGTTTTGGAAGTGGAAGGGCTTGACAAATGGGATCCAG
CGCCGGCTTTAACACCCGGAGttttcaaacattgaatgtcaTCTACTTTT
GGATCCAAATCCATTGGTGAAAAAGACTGGAAAGCACACGGCCACAATGT
TGCAACAAATTCTAATACTGTGACAGCAAAATCAAGGCCACCTGGACCTG
ATTGGACATCAAGTTTGAGGTGTATCAAACAAGACAATGTGATTTATCCA
AATGATGAACCTGTTCTTCGCCAGGGGATGAGACCATTCCTTCATAAGAA
TGAACAAAGTCTGGAAGAATGGGCTTATTACAGAGACGGATCAAGAAATG
GCAAACGTTGTATCATCAATGGTAAACGCCAAGGGAACGTCCAATCGATC
AATGAGATAAGCGTCGAAAGCACCATTGGGAATAGATCAAAAGTTCCTGA
CCCTCGTGGCGGAGTCGATAGCCTTACAGCAGGAGACAAAAGTTATGCAG
TGCCTGAATTTTCGAAAGGATTCCATAAAGAAGGTTCAACGCTACCCGCT
GTTAATTTTAGcCGGTCCAATAAAATCGTGACAGATACTTTCATTCCTCT
GCAACCACTTCCACAACATAAAAGcaTATCTTACAAGGAGAAAGAGGTGG
TCCGTAAAAAGAATCACGAAGTTTTGGAAGTGGAAGGGCTTGACAAATGG
GATCCAGCGCCGGCTTTAACACCCGGAGttttcaaacattga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000083_pilon | genome | sc0000083_pilon:46590..49686 + |
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