MSTRG.11426.1.p1 (mRNA) -

Overview
NameMSTRG.11426.1.p1
Unique NameMSTRG.11426.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000082_pilon:1305183..1306674+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11426.1.p1 ID=MSTRG.11426.1.p1|Name=MSTRG.11426.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1492bp|location=Sequence derived from alignment at sc0000082_pilon:1305183..1306674+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTTCTGATGATATTGTTGCATTTTATACCGCACTTCAAACATAAAATTA
TGctattagttttttcaaaaaaaagtaattGTCGAACACAAAACACAAGA
GACTGGACAGATGACATCAAAAAGTAATTAATATTGCATACAATTAAATC
AACAATGTTTACTAGTAATTGTAAATGGGTTGGGTGGTTTTTTCCCGTAT
ACCATGCCTCACGTATAAAAAGCGTGGTTAGTTAATCATTCAGTTCAGAC
TACTTGACACAACACACAAGACACAACATTTTAGACCATCCATAAAATAT
ACATTTTGCGAAAATGGTTTTCAAATACACAAAAGCCGTATGCAGAAGAA
TCCCAAGATCCATTGTTGATGGAGGAATCCGAATGGATTTGAATAAACCT
TTGGTGGATTACGAGAGAGCTGTCAAACAGCATGAACACATGGTTCAATC
TTTGGAGAAACTTGGTATCAAGGTCACCGTATTGGAAACAGATGAATCGA
CACCAGATTGCGTTTTTGTTGAGGATCCAGCTGTTATTATCGGCGATACT
GTCTTAATCACCAACCCAGGGCGTGAATCACGAAAAGCAGAAACCAAGAT
CATGAAAGACTATTTCAAGACGAACGAACCACATTTGAAAATCGTTGAAA
TGGAATCGCCAGCTACACTTGATGGTGGTGACGTCATGTTTACTGGTCGT
GAAATCTTTGTTGGGCAATCGAGGCGAACAAATGAAGCTGGTTTTTTGAA
GGTTAAAGAAACATTCCCGAATTATCCCGTTCATGCAATCCCGATTCCCG
AAAACACCCTCCATTTGATTTCTTGTATGAGTCCAGTCGATGAAGACACT
ATCCTATGTGGTGGCTCCCCAGACGCCTCAGCCGCTCTGAAGGTTGTCTT
GGAAAAAGCAACACATATGTACAGTGTTGTTAGAACACCAGAAGATGACG
GAGCTAACCTTGTCAGTGCTAATGGTACCATTTTGTGGCGATCTGATCTT
CCAGCTACCTCCAATATTGTATCCAAATTAAACATTCCAAAAGTCGATCT
AGATGGCTCAGAATTGAATAAAGTTGATGGTAGCTTGACTTGTTGTTCTT
TGCTTTACAACTaaattgaaaaagaactctctcaaaagaaacaaaaaacc
gacacacaaatttttataaaaatatctaaCTATTTATGAAATCTTATAGC
ACCTAATAGCTTCacaaaaaatattgtaaaaacaaatagaaatttcttta
cttgttttgatctttaTTCTGACGgtattgaaactaggaattctTTCTCG
TAATGTTATACATTTTGTTATACCTGTTTCTAGTCTTTTATCATGATTTT
ATCAagcaatttcaaaataaaattttttaaacaaaattttaacttaTTCT
TCCTTCGTGTCTTCCCAGCGAAAATAAATTTACCCTAAAATTCTACAGCT
TCATATCCGGCAAACACAGGGGCGATATCTTCTTCTTCTAAA

Coding sequence (CDS) from alignment at sc0000082_pilon:1305183..1306674+

>MSTRG.11426.1.p1 ID=MSTRG.11426.1.p1|Name=MSTRG.11426.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=801bp|location=Sequence derived from alignment at sc0000082_pilon:1305183..1306674+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTCAAATACACAAAAGCCGTATGCAGAAGAATCCCAAGATCCAT
TGTTGATGGAGGAATCCGAATGGATTTGAATAAACCTTTGGTGGATTACG
AGAGAGCTGTCAAACAGCATGAACACATGGTTCAATCTTTGGAGAAACTT
GGTATCAAGGTCACCGTATTGGAAACAGATGAATCGACACCAGATTGCGT
TTTTGTTGAGGATCCAGCTGTTATTATCGGCGATACTGTCTTAATCACCA
ACCCAGGGCGTGAATCACGAAAAGCAGAAACCAAGATCATGAAAGACTAT
TTCAAGACGAACGAACCACATTTGAAAATCGTTGAAATGGAATCGCCAGC
TACACTTGATGGTGGTGACGTCATGTTTACTGGTCGTGAAATCTTTGTTG
GGCAATCGAGGCGAACAAATGAAGCTGGTTTTTTGAAGGTTAAAGAAACA
TTCCCGAATTATCCCGTTCATGCAATCCCGATTCCCGAAAACACCCTCCA
TTTGATTTCTTGTATGAGTCCAGTCGATGAAGACACTATCCTATGTGGTG
GCTCCCCAGACGCCTCAGCCGCTCTGAAGGTTGTCTTGGAAAAAGCAACA
CATATGTACAGTGTTGTTAGAACACCAGAAGATGACGGAGCTAACCTTGT
CAGTGCTAATGGTACCATTTTGTGGCGATCTGATCTTCCAGCTACCTCCA
ATATTGTATCCAAATTAAACATTCCAAAAGTCGATCTAGATGGCTCAGAA
TTGAATAAAGTTGATGGTAGCTTGACTTGTTGTTCTTTGCTTTACAACTa
a
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11426MSTRG.11426Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11426.1.p1.exon1MSTRG.11426.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11426.1.p1MSTRG.11426.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082_pilongenomesc0000082_pilon:1305183..1306674 +