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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1223510..1226321+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11418.1.p1 ID=MSTRG.11418.1.p1|Name=MSTRG.11418.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2812bp|location=Sequence derived from alignment at sc0000082_pilon:1223510..1226321+ (Clytia hemisphaerica_ch_hm2_pilon)
atttaacgattgttgatttttgatgagTGCTGCATTCGAGACCTCGAGAA
ATTCTGCAAACTTGGCTTTCTTTACCTGTTACCCactattatgatttttt
tcataaagtgCACATTTCCCGTAAAGAAGTGGTTAAGAAACACCATTATG
CacacaattttaaaaagaggaTGAGACAGGgtagctaccaaaaatagcta
TATTATAGCTACAATTCTACTCATCATAGCTACAATTCTACTCGTCATAG
CTACAATTCTTGTATAGATAAGATATTCAATAGCTGAAATGcagattcaa
aaactttatgaTATCGTTTGAAATATGCAGATTCACCGCCAGTATTTCTC
GaatcaccgaaataccgacccaaaaaatcaattttaccgTCACCGCAAGG
CATGtccaacaccgaaataccgacactttttacttaaaacaccgaaacac
cgacgcaaaaaagggtcaataccgacacaccgacaaacccgtacgccccc
cctgGTAACAGTCCATGCTGGTGAAGACAAACCCAACATTGTCGTCTTAT
TGGCCGACGACGTTGGTATTGGTGATATTGGTTGCTATGGAAACGGCACT
ATAAACACACCCAATATTGACCGGTTATGCCAAAAAGGCGTCAAAATGGA
ACACAACTATGCTGCAGCACCACTCTGTACACCGAGTCGAGCATCCCTTA
TGACCGGGAGATACCCCGTAAGAGTCGGGTATGTAGCCCGTACCAAGGAC
GTAGAAAGAGTCACCATCTATACCTCTGCAACAGGCGGCCTTCCACAGAG
TGAAACAAcatttgctgaaattttcaaacaacatGGATACACAAATGGCT
TCTTTGGTAAATGGCATTTAGGTCTGCATTGTGGTGAAAAGGACTTTTGC
CATCATCCAATGAACAATGGATTTGACCACTATTATGGAATGCCCTTGAC
TAACTTAAAGGACTGCGGTGATTGGTCAATTTTTGATATCCAATCAGAAG
CTGTCATGGTCCCGAACCCAAAACATGTATTCGCTTTGATTATCATCCTA
GCAATCTCTTGCTTTGTCTTGAATTTGATTTCCCTCCGATTATTTTTGGT
TCTGTTTTTGATTGTTCTTGGTTGGTATTTATACCATATAGGGGCTTATT
ATTTTCATCGTCAATTCAACTGTATAGTGATGAAAGATAAACAGGTTGTT
CAACAGACAGTAGACTTGGAGCATTTGACAGGACACTTGGTGGGTGAAGT
CAAAAGCTTTATTCGTCAGAATGCGGAGAATCCATTTTTAGCTTACGTTG
CTTTTCATAAAGCCCACGTGGCCCTTGCTAATCCACCTAGATTTCAAGGT
GTCAGTGAATATGGATCTTATGGTGACACCATGGCTGAACTAGATTGGGC
GGTCGGTGAAATTGTCAATTATTTGGATGATCTTAATCTAACAAAGAACA
CAATCATCTACTTCATGTCTGATCACGGCCCAGCTAAATATGCTTACAAC
ACTGCTACTGGCGAATACCAAGGCGGTTGGGCGGGAATCTATCGAGGTGG
CAAAGGATATAATTATCAGGGTGGTATACGGGTTCCTAAAATCGTTCAAT
GGCAAGGTAAGATATCAGGTGGGAAGAAGATTTCACGTCCAAGTAGTCAT
ATGGATATGTTTCCGACGTTATTGTCGATGGCTAATATACCATATGATGG
ATCTGCCTTGGATGGGGAAGATACATCAATGCTGATGATGGGAGATAGTC
AGGCTAGTCCTGATCGAATCTTTTACCATTATTGTGGAATCCATATTCAT
GCTGTCAGCATTGAGGAAAAAGCAAGGAATCAAGTCTGGGTTGTTCATTT
TATCATTCCTGTCAATGATGATGGTCACCTAGCAACGTGTTacggtgatg
acgtcattgtccTGGATGAGCCAGATATTTACGAATTAGTCCAAGATCCA
AGTGAGAGCAATCCTTTAGATCGCACCGACCCAAATTATGAAAGAGTATT
AAATTTGGCTAGATTAAAAGCGACAGAGTTTAACGCGACTGTTGATTTTT
CGGTGCCCAACCAGCTGAGTCACGAGATGAATTCTTTCTCTATTGATCGA
GCTCCGTGCTGCAATGAAATGCCGAACTGTATTTgttaagaaaaaactat
ttctTCATCATTTTGAGAGTTAGGTTTATTCAACGATTGAAAGAACTAAC
ATTCACGTCTACAACTTACAGTATTATTCATTTACAAACactatattttt
atttgaacaattttatGTTAAACATCGAGGCTCAAAAAcgccaaaaaata
aataactttagACAACTCTAGATGGGATGTagggcgaaaataaaaaaatg
tagtgtttccggaaaccggtcgggtgaaaaaatataattttctgacccgg
ccgcagacttcgttagtagttgatacattagtattcaggcttcatactgt
ttgcacataaaagttatctttaaagttctatttcaacgATCTTAAGTTAA
GTTAtcaaaagtagcaaaaaaaaattatttccggccagccgcatgagagc
ttttttccttcacccgcattccggaaacactacatttttttattttcgcc
tagtaaaaataatttttaaactttgcaCCATGTAAtactatttttattca
atttcatGCTAATTTGATACTAACCTGACACtatatcttaaaattttctt
ttcttttgcttATAATTCTCACGCTTGTTATACGACATATGCTGCCATGC
CTTTTTGGCTACCACATTTCATTGCAGTGATATTCACATTATGAAGAGTA
CTTTACAATAAC Coding sequence (CDS) from alignment at sc0000082_pilon:1223510..1226321+ >MSTRG.11418.1.p1 ID=MSTRG.11418.1.p1|Name=MSTRG.11418.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1815bp|location=Sequence derived from alignment at sc0000082_pilon:1223510..1226321+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGATTCACCGCCAGTATTTCTCGaatcaccgaaataccgacccaaa
aaatcaattttaccgTCACCGCAAGGCATGtccaacaccgaaataccgac
actttttacttaaaacaccgaaacaccgacgcaaaaaagggtcaataccg
acacaccgacaaacccgtacgccccccctgGTAACAGTCCATGCTGGTGA
AGACAAACCCAACATTGTCGTCTTATTGGCCGACGACGTTGGTATTGGTG
ATATTGGTTGCTATGGAAACGGCACTATAAACACACCCAATATTGACCGG
TTATGCCAAAAAGGCGTCAAAATGGAACACAACTATGCTGCAGCACCACT
CTGTACACCGAGTCGAGCATCCCTTATGACCGGGAGATACCCCGTAAGAG
TCGGGTATGTAGCCCGTACCAAGGACGTAGAAAGAGTCACCATCTATACC
TCTGCAACAGGCGGCCTTCCACAGAGTGAAACAAcatttgctgaaatttt
caaacaacatGGATACACAAATGGCTTCTTTGGTAAATGGCATTTAGGTC
TGCATTGTGGTGAAAAGGACTTTTGCCATCATCCAATGAACAATGGATTT
GACCACTATTATGGAATGCCCTTGACTAACTTAAAGGACTGCGGTGATTG
GTCAATTTTTGATATCCAATCAGAAGCTGTCATGGTCCCGAACCCAAAAC
ATGTATTCGCTTTGATTATCATCCTAGCAATCTCTTGCTTTGTCTTGAAT
TTGATTTCCCTCCGATTATTTTTGGTTCTGTTTTTGATTGTTCTTGGTTG
GTATTTATACCATATAGGGGCTTATTATTTTCATCGTCAATTCAACTGTA
TAGTGATGAAAGATAAACAGGTTGTTCAACAGACAGTAGACTTGGAGCAT
TTGACAGGACACTTGGTGGGTGAAGTCAAAAGCTTTATTCGTCAGAATGC
GGAGAATCCATTTTTAGCTTACGTTGCTTTTCATAAAGCCCACGTGGCCC
TTGCTAATCCACCTAGATTTCAAGGTGTCAGTGAATATGGATCTTATGGT
GACACCATGGCTGAACTAGATTGGGCGGTCGGTGAAATTGTCAATTATTT
GGATGATCTTAATCTAACAAAGAACACAATCATCTACTTCATGTCTGATC
ACGGCCCAGCTAAATATGCTTACAACACTGCTACTGGCGAATACCAAGGC
GGTTGGGCGGGAATCTATCGAGGTGGCAAAGGATATAATTATCAGGGTGG
TATACGGGTTCCTAAAATCGTTCAATGGCAAGGTAAGATATCAGGTGGGA
AGAAGATTTCACGTCCAAGTAGTCATATGGATATGTTTCCGACGTTATTG
TCGATGGCTAATATACCATATGATGGATCTGCCTTGGATGGGGAAGATAC
ATCAATGCTGATGATGGGAGATAGTCAGGCTAGTCCTGATCGAATCTTTT
ACCATTATTGTGGAATCCATATTCATGCTGTCAGCATTGAGGAAAAAGCA
AGGAATCAAGTCTGGGTTGTTCATTTTATCATTCCTGTCAATGATGATGG
TCACCTAGCAACGTGTTacggtgatgacgtcattgtccTGGATGAGCCAG
ATATTTACGAATTAGTCCAAGATCCAAGTGAGAGCAATCCTTTAGATCGC
ACCGACCCAAATTATGAAAGAGTATTAAATTTGGCTAGATTAAAAGCGAC
AGAGTTTAACGCGACTGTTGATTTTTCGGTGCCCAACCAGCTGAGTCACG
AGATGAATTCTTTCTCTATTGATCGAGCTCCGTGCTGCAATGAAATGCCG
AACTGTATTTgttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:1223510..1226321 + |
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