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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1215848..1219020+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11417.1.p1 ID=MSTRG.11417.1.p1|Name=MSTRG.11417.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3173bp|location=Sequence derived from alignment at sc0000082_pilon:1215848..1219020+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCATACATACCATTCACAATAACTTTAGGAAAAACTATTAAAACTAGAA
Gataaaatcatattttcatacttttctcttatatttatatttctttaggt
gaaaaataaaaagtatgaACAATGTTTGACGCTTATCAAAGTGGTGAGGA
TGGCCACCGGAGAATCAAGTACTGAAGACGaattgtcacgtgatttctca
ACATTGAGTACATCCTCCTCTGTTACAAGTTCCATAAGTAGAAAAAGTAA
TGCAAGTACGTTAAAAGATGACCAAGATGGTGAAGATTTATCTCGTCAAG
GAACGACAATGTCGGATGAATCAACGTCATCCCGACCGACCTCTGGACTA
TCGTCGGTAGCTACTGCTTCCCGACAAAATACGGTTGGTTCGTTAAGAAG
TGAGAATAATTCACGACAATCTCAACGATCGCTTTCTAGAGGAAGCACTA
TTCGAAATGATGATCCCGAAGTGAAGAATAATTCGGTTTCACGAGAATCT
TCTGTCTTGTCTTCTCGGAATGGATATGATGACGATTTTCATGACGACGA
AGAATCCAGTCCAACTTCGGCATCAAGCCGACAACAGTCGTTTGTCGGGA
AATCACCAAGTAATGATAATAGTGATGATACTGAGAGCGAAAGTGAAGAT
ATGGGGAAAATGGAGAAAGAAAACagtgttttgattgaaaaagatGGGAA
ATTTGAGTTAGTCGAAGAACGAAACTTAACTATCGATCAACGAGAAGCTC
TCGGTTTAACGAAACGAGAAAAACGAAAACCGAACACGTTGAACATTCCC
GCGTCTAGTGGTCGTGTCCGTAAATCAAGTAACCCGGAGTACGCACATTT
GAAATCGGAGTACGGTATGAGTGAACAACAGAAGGAGATGAAATTTCGAC
GTGTTTCCGTCATGCagatgagacgacaggaggagaaggaacgaatgaaa
caagaagacgaagagaagaagagagCGGCTGATAAATCGTTCAAGGTACA
CTATCGTATTGTGTGATGTTTTGGTCAAGGTTTTATATAAACTGGCTTTT
GCGGGTTAACTATAATGACTGAAAAAATTCTCGTCTAgctaaaaaaattt
ctcaattgTTGGAAAATAATTAAGTTGAGGTTAGCATAGTTCGCACGTTC
GAAAGTGAACTTTTGGTTTCTTTGATTACTATTTTTCTCATTGCTCACAT
GGGTCACAGGTTGTCGATCATATACAGCCCGTTCTTTTTGTTGGTTTATT
CGTTAGACAAAAAGTAGTTTTTGGTGTTTGGTCTGCTCGAGCTAGCAATA
AACTAATTTTAAATTCTCCTTTTATTTTTCCAGCAATGGCTAGCACAAAA
GAAAGAGACCAAAGCAGACAAGAAGCCTGCTACTCCACATCAAcgtaaga
aaaagaagacagtACCTAGTGTACAATTGAGCGAAGAAGAAATGCAGCGG
CGGGAGCTTCAAGACCGCGCGTTCAAACAATGGATAGATGAGAAGGAAGA
GCAAACGAAAGATGAGAAAAAGATGGAGGAAATCAGACTAGCTGAAGAAG
CACAAAATTATGTTGTCAGAGATCGAAAACAATGTGACAAAGCTTTTAAA
GAGTGAggattttgtttatgttgatcTCAgccttttattttttgaaatct
ttcctGCAAATCTTTCTGGCTTAATCATATTTAAGATACCAGCTTGtcca
acagtaaagaaaataaTAAGCGACTTTTATGATTTTCCGCCTATCATTAT
GTTGGAGACAGAAATTGACCTTGAAGCACTGCAGAGGTTCACGAGGGAAT
TTCCTTTCTCTATCAAGCAAGAAAAGTAAAACCTTATGTTGAcagaataa
ataatttttttttgattaaatAGTAATTTACCTTTACTTGTCTTAGATgg
ttgaaaaagaagaaagtggAAAGACAATCAACGCCCACTCAAACCACCCG
GAAGAAGTCAACCTACACACCTGCAGGTGTCACGCCAACTGCAACCAAGA
AGAAGTCTTTAGCACCTATATACGCTCCTTCTCTTGAGCAGAGGCGCCCT
CGTTCTTCTGTACGTAGCATGGCGGCGAATGGGATggattgcaaaaatga
cgtcgAAGTAAAGAGGAGAcctaaaacatccaaaataagGTATTTCTTAA
TTGCTGATAGTTTGTCTTTTATTAATGCCTTTTATCATCCCGAACTCAAT
TTTAATCGTTCTAAAGTTCtttttttGTGAACGCTCTCCTCTTTAACTCT
TACTTGTCATTATGTTAGGATAACAGACAATTTTGGATATCGACACCCTG
CATCAATCGACGACTTCATCGAAAGGAGGAAGTGATAAGCATCGTTGAGC
GATAAATGGTATTAACTTGTTTTTCAATCAAAGATTACCGTAACTTTGCT
TGACGAACCATTCTCTAGTTGTCACCACCTTTGCTCCAACGACACAGCAA
CTGATGTTAGGAACCAAGGTATAATGATGAACATTGTAACAGACTTGTAA
CATTCTGCCTCTCTGATATTGACTAAAATCGAGATTTTGCGATTTGGAAT
GTGGGTTTCAATCAACCATATAAACATGATAACTATTGAATCCCTCCATG
ATGGAATCAGAAAAAAGTCGACGAATCCGGGGTAGGTCTCTATATTTTCA
AGGGAGAGTATCTTTAAAGTTTACCGAAATTCCAAGAATCTCTGAAATTT
CGAAGAAAATAAAAGGGAGAATATCttaaaagtttgttaaaattcCAGGA
AGCTGAAGTTCCTGAATAAATCAAGGCATGACAAGTTAAAAGTTTTATCG
ATTCAGCTTTTTCCATCAAAGTTTTACATACAGACTTAATTACCTAACAC
TTAGGAATAAACTGTATACTGCTCTTTTTAACATGTTATACAtttatttt
agttcgaatttattttgctacattattttaggatagggactttttttgat
tttgatttttttctcgataatcAAACCATTTCTTCTCATCcaaaattgta
aataaaaaattactaaaaacaaaGAATCTTTATTTATATCTTATATCAAA
GATAATTAGATTTTCTCAAATGATTTTAATTGTAAATTTTATTCTTTTAC
taaagataatatttttaatCCATCATGGTTATTTtcctgaaaatcaaaat
ttcatgacATTTTTTAAAACCAG Coding sequence (CDS) from alignment at sc0000082_pilon:1215848..1219020+ >MSTRG.11417.1.p1 ID=MSTRG.11417.1.p1|Name=MSTRG.11417.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5700bp|location=Sequence derived from alignment at sc0000082_pilon:1215848..1219020+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCACCGGAGAATCAAGTACTGAAGACGaattgtcacgtgatttctc
aACATTGAGTACATCCTCCTCTGTTACAAGTTCCATAAGTAGAAAAAGTA
ATGCAAGTACGTTAAAAGATGACCAAGATGGTGAAGATTTATCTCGTCAA
GGAACGACAATGTCGGATGAATCAACGTCATCCCGACCGACCTCTGGACT
ATCGTCGGTAGCTACTGCTTCCCGACAAAATACGGTTGGTTCGTTAAGAA
GTGAGAATAATTCACGACAATCTCAACGATCGCTTTCTAGAGGAAGCACT
ATTCGAAATGATGATCCCGAAGTGAAGAATAATTCGGTTTCACGAGAATC
TTCTGTCTTGTCTTCTCGGAATGGATATGATGACGATTTTCATGACGACG
AAGAATCCAGTCCAACTTCGGCATCAAGCCGACAACAGTCGTTTGTCGGG
AAATCACCAAGTAATGATAATAGTGATGATACTGAGAGCGAAAGTGAAGA
TATGGGGAAAATGGAGAAAGAAAACagtgttttgattgaaaaagatGGGA
AATTTGAGTTAGTCGAAGAACGAAACTTAACTATCGATCAACGAGAAGCT
CTCGGTTTAACGAAACGAGAAAAACGAAAACCGAACACGTTGAACATTCC
CGCGTCTAGTGGTCGTGTCCGTAAATCAAGTAACCCGGAGTACGCACATT
TGAAATCGGAGTACGGTATGAGTGAACAACAGAAGGAGATGAAATTTCGA
CGTGTTTCCGTCATGCagatgagacgacaggaggagaaggaacgaatgaa
acaagaagacgaagagaagaagagagCGGCTGATAAATCGTTCAAGCAAT
GGCTAGCACAAAAGAAAGAGACCAAAGCAGACAAGAAGCCTGCTACTCCA
CATCAAcgtaagaaaaagaagacagtACCTAGTGTACAATTGAGCGAAGA
AGAAATGCAGCGGCGGGAGCTTCAAGACCGCGCGTTCAAACAATGGATAG
ATGAGAAGGAAGAGCAAACGAAAGATGAGAAAAAGATGGAGGAAATCAGA
CTAGCTGAAGAAGCACAAAATTATGTTGTCAGAGATCGAAAACAATGTGA
CAAAGCTTTTAAAGAATggttgaaaaagaagaaagtggAAAGACAATCAA
CGCCCACTCAAACCACCCGGAAGAAGTCAACCTACACACCTGCAGGTGTC
ACGCCAACTGCAACCAAGAAGAAGTCTTTAGCACCTATATACGCTCCTTC
TCTTGAGCAGAGGCGCCCTCGTTCTTCTGTACGTAGCATGGCGGCGAATG
GGATggattgcaaaaatgacgtcgAAGTAAAGAGGAGAcctaaaacatcc
aaaataagGATAACAGACAATTTTGGATATCGACACCCTGCATCAATCGA
CGACTTCATCGAAAGGAGGAAGTGAATGGCCACCGGAGAATCAAGTACTG
AAGACGaattgtcacgtgatttctcaACATTGAGTACATCCTCCTCTGTT
ACAAGTTCCATAAGTAGAAAAAGTAATGCAAGTACGTTAAAAGATGACCA
AGATGGTGAAGATTTATCTCGTCAAGGAACGACAATGTCGGATGAATCAA
CGTCATCCCGACCGACCTCTGGACTATCGTCGGTAGCTACTGCTTCCCGA
CAAAATACGGTTGGTTCGTTAAGAAGTGAGAATAATTCACGACAATCTCA
ACGATCGCTTTCTAGAGGAAGCACTATTCGAAATGATGATCCCGAAGTGA
AGAATAATTCGGTTTCACGAGAATCTTCTGTCTTGTCTTCTCGGAATGGA
TATGATGACGATTTTCATGACGACGAAGAATCCAGTCCAACTTCGGCATC
AAGCCGACAACAGTCGTTTGTCGGGAAATCACCAAGTAATGATAATAGTG
ATGATACTGAGAGCGAAAGTGAAGATATGGGGAAAATGGAGAAAGAAAAC
agtgttttgattgaaaaagatGGGAAATTTGAGTTAGTCGAAGAACGAAA
CTTAACTATCGATCAACGAGAAGCTCTCGGTTTAACGAAACGAGAAAAAC
GAAAACCGAACACGTTGAACATTCCCGCGTCTAGTGGTCGTGTCCGTAAA
TCAAGTAACCCGGAGTACGCACATTTGAAATCGGAGTACGGTATGAGTGA
ACAACAGAAGGAGATGAAATTTCGACGTGTTTCCGTCATGCagatgagac
gacaggaggagaaggaacgaatgaaacaagaagacgaagagaagaagaga
gCGGCTGATAAATCGTTCAAGCAATGGCTAGCACAAAAGAAAGAGACCAA
AGCAGACAAGAAGCCTGCTACTCCACATCAAcgtaagaaaaagaagacag
tACCTAGTGTACAATTGAGCGAAGAAGAAATGCAGCGGCGGGAGCTTCAA
GACCGCGCGTTCAAACAATGGATAGATGAGAAGGAAGAGCAAACGAAAGA
TGAGAAAAAGATGGAGGAAATCAGACTAGCTGAAGAAGCACAAAATTATG
TTGTCAGAGATCGAAAACAATGTGACAAAGCTTTTAAAGAATggttgaaa
aagaagaaagtggAAAGACAATCAACGCCCACTCAAACCACCCGGAAGAA
GTCAACCTACACACCTGCAGGTGTCACGCCAACTGCAACCAAGAAGAAGT
CTTTAGCACCTATATACGCTCCTTCTCTTGAGCAGAGGCGCCCTCGTTCT
TCTGTACGTAGCATGGCGGCGAATGGGATggattgcaaaaatgacgtcgA
AGTAAAGAGGAGAcctaaaacatccaaaataagGATAACAGACAATTTTG
GATATCGACACCCTGCATCAATCGACGACTTCATCGAAAGGAGGAAGTGA
ATGGCCACCGGAGAATCAAGTACTGAAGACGaattgtcacgtgatttctc
aACATTGAGTACATCCTCCTCTGTTACAAGTTCCATAAGTAGAAAAAGTA
ATGCAAGTACGTTAAAAGATGACCAAGATGGTGAAGATTTATCTCGTCAA
GGAACGACAATGTCGGATGAATCAACGTCATCCCGACCGACCTCTGGACT
ATCGTCGGTAGCTACTGCTTCCCGACAAAATACGGTTGGTTCGTTAAGAA
GTGAGAATAATTCACGACAATCTCAACGATCGCTTTCTAGAGGAAGCACT
ATTCGAAATGATGATCCCGAAGTGAAGAATAATTCGGTTTCACGAGAATC
TTCTGTCTTGTCTTCTCGGAATGGATATGATGACGATTTTCATGACGACG
AAGAATCCAGTCCAACTTCGGCATCAAGCCGACAACAGTCGTTTGTCGGG
AAATCACCAAGTAATGATAATAGTGATGATACTGAGAGCGAAAGTGAAGA
TATGGGGAAAATGGAGAAAGAAAACagtgttttgattgaaaaagatGGGA
AATTTGAGTTAGTCGAAGAACGAAACTTAACTATCGATCAACGAGAAGCT
CTCGGTTTAACGAAACGAGAAAAACGAAAACCGAACACGTTGAACATTCC
CGCGTCTAGTGGTCGTGTCCGTAAATCAAGTAACCCGGAGTACGCACATT
TGAAATCGGAGTACGGTATGAGTGAACAACAGAAGGAGATGAAATTTCGA
CGTGTTTCCGTCATGCagatgagacgacaggaggagaaggaacgaatgaa
acaagaagacgaagagaagaagagagCGGCTGATAAATCGTTCAAGCAAT
GGCTAGCACAAAAGAAAGAGACCAAAGCAGACAAGAAGCCTGCTACTCCA
CATCAAcgtaagaaaaagaagacagtACCTAGTGTACAATTGAGCGAAGA
AGAAATGCAGCGGCGGGAGCTTCAAGACCGCGCGTTCAAACAATGGATAG
ATGAGAAGGAAGAGCAAACGAAAGATGAGAAAAAGATGGAGGAAATCAGA
CTAGCTGAAGAAGCACAAAATTATGTTGTCAGAGATCGAAAACAATGTGA
CAAAGCTTTTAAAGAATggttgaaaaagaagaaagtggAAAGACAATCAA
CGCCCACTCAAACCACCCGGAAGAAGTCAACCTACACACCTGCAGGTGTC
ACGCCAACTGCAACCAAGAAGAAGTCTTTAGCACCTATATACGCTCCTTC
TCTTGAGCAGAGGCGCCCTCGTTCTTCTGTACGTAGCATGGCGGCGAATG
GGATggattgcaaaaatgacgtcgAAGTAAAGAGGAGAcctaaaacatcc
aaaataagGATAACAGACAATTTTGGATATCGACACCCTGCATCAATCGA
CGACTTCATCGAAAGGAGGAAGTGAATGGCCACCGGAGAATCAAGTACTG
AAGACGaattgtcacgtgatttctcaACATTGAGTACATCCTCCTCTGTT
ACAAGTTCCATAAGTAGAAAAAGTAATGCAAGTACGTTAAAAGATGACCA
AGATGGTGAAGATTTATCTCGTCAAGGAACGACAATGTCGGATGAATCAA
CGTCATCCCGACCGACCTCTGGACTATCGTCGGTAGCTACTGCTTCCCGA
CAAAATACGGTTGGTTCGTTAAGAAGTGAGAATAATTCACGACAATCTCA
ACGATCGCTTTCTAGAGGAAGCACTATTCGAAATGATGATCCCGAAGTGA
AGAATAATTCGGTTTCACGAGAATCTTCTGTCTTGTCTTCTCGGAATGGA
TATGATGACGATTTTCATGACGACGAAGAATCCAGTCCAACTTCGGCATC
AAGCCGACAACAGTCGTTTGTCGGGAAATCACCAAGTAATGATAATAGTG
ATGATACTGAGAGCGAAAGTGAAGATATGGGGAAAATGGAGAAAGAAAAC
agtgttttgattgaaaaagatGGGAAATTTGAGTTAGTCGAAGAACGAAA
CTTAACTATCGATCAACGAGAAGCTCTCGGTTTAACGAAACGAGAAAAAC
GAAAACCGAACACGTTGAACATTCCCGCGTCTAGTGGTCGTGTCCGTAAA
TCAAGTAACCCGGAGTACGCACATTTGAAATCGGAGTACGGTATGAGTGA
ACAACAGAAGGAGATGAAATTTCGACGTGTTTCCGTCATGCagatgagac
gacaggaggagaaggaacgaatgaaacaagaagacgaagagaagaagaga
gCGGCTGATAAATCGTTCAAGCAATGGCTAGCACAAAAGAAAGAGACCAA
AGCAGACAAGAAGCCTGCTACTCCACATCAAcgtaagaaaaagaagacag
tACCTAGTGTACAATTGAGCGAAGAAGAAATGCAGCGGCGGGAGCTTCAA
GACCGCGCGTTCAAACAATGGATAGATGAGAAGGAAGAGCAAACGAAAGA
TGAGAAAAAGATGGAGGAAATCAGACTAGCTGAAGAAGCACAAAATTATG
TTGTCAGAGATCGAAAACAATGTGACAAAGCTTTTAAAGAATggttgaaa
aagaagaaagtggAAAGACAATCAACGCCCACTCAAACCACCCGGAAGAA
GTCAACCTACACACCTGCAGGTGTCACGCCAACTGCAACCAAGAAGAAGT
CTTTAGCACCTATATACGCTCCTTCTCTTGAGCAGAGGCGCCCTCGTTCT
TCTGTACGTAGCATGGCGGCGAATGGGATggattgcaaaaatgacgtcgA
AGTAAAGAGGAGAcctaaaacatccaaaataagGATAACAGACAATTTTG
GATATCGACACCCTGCATCAATCGACGACTTCATCGAAAGGAGGAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000082_pilon | genome | sc0000082_pilon:1215848..1219020 + |
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