|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1213344..1215589+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11416.1.p1 ID=MSTRG.11416.1.p1|Name=MSTRG.11416.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2246bp|location=Sequence derived from alignment at sc0000082_pilon:1213344..1215589+ (Clytia hemisphaerica_ch_hm2_pilon)
gacgtcaaatgagcttagtaaagctcaaattgcagatgtagacaATAAGC
TTGGTATACAAGTAATGAACAAATTGAAAGTAtatcgaatgcaattaaaa
acaAATCATTAGGTACTATTTGTATTTTGGCTTGTGAAATACCatcagat
taaaaaaatttaacttatAGCACCACTACACTATGTGCAAAAGCATAGTA
TACAGGGGGCTTCCTTCATgatgaaatttacataaaatttcaaaaaaaga
agattgaaaggtTAACATTGAGGTTTGACATAACATTAAACCTTTTTTAG
ttcaaataaatgaaaacaaaatttcagtGTCGCTGTATGAATTGAATAAT
GGGTGGCAGTCAATCCGCATTCACTGTTGAAGAGCTAAAAGAATACCAAG
AACTTACATACTTCActcaaaaagaaattctacaTTGTTTCAAGCGTTTT
CAACAGTTGGATCCCACTCTGGTCACGTACAATAATAAAAACCCACAATT
GCCACAAAAAACTATACTCAAATTACCAGAGCTTGAAGTGAATCCATTTC
GTGATCGAATCTGTAAAGTGTTCTCTTCTAGTCATGATGGAAACATGACT
TTTGAGGACTTTTTGGATATGATGTCAGTATTTTCAGAGAATGCTCCAAA
AACTGTTAAAGTGGAATATGCATTCCGTATTTATGATTTCAATGAGGATG
ATTACATTTGTGAAAGTGATTTGAAGCGTGTTATTGATCGATTATGTGGA
GAAGATGACAAACTTTCAAGTGAGGACACAAACAGCATTGTCAAGAAAAT
CTTGCTTGAGGCTGACTTGGATGATGATAATCAACTGTCGTTTGCAGAAT
TTGAACATGTCATATCTAAAGCCCCAGATTTCTTGAACGCTTTTAGAATT
cgtgtttaaagtttgttttctattcaAGCGATTTTATTGACACTTGACCA
ATATATTTTCAAGATTGTATCATTTTTATTCTCCATAGTCTTTTAAAGCT
CAATTTCATTGACTAGACAGCTCAAAAATTCAATGGTGATTCTCAACAtt
ttagtgtttagttatttttagtggttttttGAGTCTTCAGAAAACAGACC
CTTATTAAAGCAGTGGGGTATAATATGATTTTAATCATCGATAAAATAAT
TGTAATCTTTTTCCTAATTTAATATGACTTTCTAGTTGGGATACTAACCT
cgcacaatttttttcttattgtttttattcttgggtgataatattttgat
aagtAGTTTTTAGTGAATCGTGTGTGTATATaattgaatgaaaatttttt
gtaaaaccaCAGAAAGGACGTGTATAAATTTGCTTTTTATgtctaaatta
tttttttgtaaacataaTCTTCAACAGGGATATTCTCTTTAAAAGAGAAA
TAGTCTTAATAATTATGTTTTATTCCAGATTTCAAACTACACAGTCAAGG
AGATATTTAAATAATGAATGGGTTAGAAAAATTATAATCCAattatattt
ttctctgtatctttgaacttgatatttattattttctgattttttttgtt
tctatagcaacatttttgctttgtttattttttgtgtaatttcaaatttg
tactttttataatatgaatctgataattttatatcaaatttgaaGTACAA
TAAGTTCTGTCTTTTTtgattgtttatttttattatgtgGATATTGGTTT
CTTCATGTACCAAAATCTTAGTTTCATGAATTTTCGTTATGAAAATTTCT
GGGAGATCtttttggattatttgtttcctctattgcagttttttgagggt
tgtttttttagtttttggttttACTTACGATTGTTTTAAAGTGTAAGCAT
TAGTCTTTTCTAATCAGACTCATTCTGAAACATTTAGCCAAAAtttttca
tactgtaatatttttatgtttgttttgatttgttttgtaaacgtgtcttt
tttaaggttatttgtgagtattttgattgtcttttCAATTCCAAGTTGgt
gaaaagtttttgtttagGTAGACTCTTTCTTTATAACAAAACCAATCCAC
CAAGCTAAAGATAAttactttgaaaatcttaaatACTTGAAACCTTCTTG
TAAAAGATGGTCTTTCAATCCTTTcggagtctctttttaaattcatAATC
ACTCCTAAATTGttatatgttatattatcattataatatatgagatataa
tatgttatTGATTGGACTAGCTGATAACATACCAAACATATATTTG Coding sequence (CDS) from alignment at sc0000082_pilon:1213344..1215589+ >MSTRG.11416.1.p1 ID=MSTRG.11416.1.p1|Name=MSTRG.11416.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=561bp|location=Sequence derived from alignment at sc0000082_pilon:1213344..1215589+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGGCAGTCAATCCGCATTCACTGTTGAAGAGCTAAAAGAATACCA
AGAACTTACATACTTCActcaaaaagaaattctacaTTGTTTCAAGCGTT
TTCAACAGTTGGATCCCACTCTGGTCACGTACAATAATAAAAACCCACAA
TTGCCACAAAAAACTATACTCAAATTACCAGAGCTTGAAGTGAATCCATT
TCGTGATCGAATCTGTAAAGTGTTCTCTTCTAGTCATGATGGAAACATGA
CTTTTGAGGACTTTTTGGATATGATGTCAGTATTTTCAGAGAATGCTCCA
AAAACTGTTAAAGTGGAATATGCATTCCGTATTTATGATTTCAATGAGGA
TGATTACATTTGTGAAAGTGATTTGAAGCGTGTTATTGATCGATTATGTG
GAGAAGATGACAAACTTTCAAGTGAGGACACAAACAGCATTGTCAAGAAA
ATCTTGCTTGAGGCTGACTTGGATGATGATAATCAACTGTCGTTTGCAGA
ATTTGAACATGTCATATCTAAAGCCCCAGATTTCTTGAACGCTTTTAGAA
TTcgtgtttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:1213344..1215589 + |
|
